Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA007082_circ_g.10 |
ID in PlantcircBase | osi_circ_012545 |
Alias | Chr02:3303421_3303580(MH63RS2), Chr02:3344905_3345064(ZS97RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr2: 3941457-3941616 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | e-circRNA |
Identification method | CIRCexplorer2, CIRCexplorer2 |
Parent gene | BGIOSGA007082 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | BGIOSGA007082_circ_g.1 BGIOSGA007082_circ_g.2 BGIOSGA007082_circ_g.3 BGIOSGA007082_circ_g.4 BGIOSGA007082_circ_g.5 BGIOSGA007082_circ_g.6 BGIOSGA007082_circ_g.7 BGIOSGA007082_circ_g.8 BGIOSGA007082_circ_g.9 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-No |
Splicing signals | CT-GA |
Number of exons covered | BGIOSGA007082-TA:1 |
Conservation Information | |
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Conserved circRNAs |
osa_circ_013228 osa_circ_013256 osa_circ_013255 osa_circ_013257* osa_circ_013270 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |