Plant Circular RNA Database

Detail information of Cotton_A_27324_circ_g.1

			
						 General Information
					
						CircRNA Name
						Cotton_A_27324_circ_g.1
					
						ID in PlantcircBase
						gar_circ_000071
					
						Alias
						CA_chr1_BGI-A2_v1.0:126799376|126803817
					
						Organism
						
							Gossypium arboreum						
					
						Position
						
							chrCA_chr1_BGI-A2_v1.0: 126799376-126803817  JBrowse»						
					
						Reference genome
						
							BGI-A2_v1.0						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Cotton_A_27324						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						3/16
					
						Tissues
						leaf/ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Cotton_A_27324:10

General Information
CircRNA Name	Cotton_A_27324_circ_g.1
ID in PlantcircBase	gar_circ_000071
Alias	CA_chr1_BGI-A2_v1.0:126799376\|126803817
Organism	Gossypium arboreum
Position	chrCA_chr1_BGI-A2_v1.0: 126799376-126803817 JBrowse»
Reference genome	BGI-A2_v1.0
Type	e-circRNA
Identification method	CIRI
Parent gene	Cotton_A_27324
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	NA
Support reads	3/16
Tissues	leaf/ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Cotton_A_27324:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTCAAAGGCTTCACAACTTTTTGAAGAATCTCATGCCGTTCCTTCAAACTTTGGTGAATAACAC
TTGTATCCCCAACATAAAGAATGTCAAATGCAACATaaaacataagatttgaaaatattaaggt
ttctccctttacgcaggacgtgtcagtccgaataaaatgagaaggaacaatggagacattcttt
ctgtctgc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							AAAACATAAGATTTGAAAATATTAAGGTTTCTCCCTTTACGCAGGACGTGTCAGTCCGAATAAA
ATGAGAAGGAACAATGGAGACATTCTTTCTGTCTGCCTTTCTAGCATGTGCCTTGTGCTTTGTT
TTACTATCAGGCTGGTTTTCCTGTTCTGTCCCTTTTTGAGTGGTACCATTACTTGAATGCACCA
GTTCTACAAATGCTGAAACAAAAACAAGAAATTGAAAGAGGACACATGAGTAGACCCCAAAAAT
AGAAATTCATTAATTAAAGCAACAATACTTTCTATCCCCTTACATTGCACATCAAGGCACTCAT
GCCAAGGCTTGTCATATCTCACTCTATCAATACGTGGAAATCTCAGGCTGTACGGTGCAGCAAA
TACCTGAAAAAAATCAAAGAGAACATAAATAAGCATAAATCAAGAGAACAGGAGTAAACAAGTA
AATAAAACAAGGAAAATGGGGAAGTCCAAATACTAAAGTAGCACTATTACTTTTGTCTGACCAA
AATATAAATTAAAAAATGGCTATAAATACACACCTCAGACCTTATAGTCCTGATATCACTGGTG
ATAGAAAGGATGATTGATCTGCAACAAGAAATTGAACATAAAGACAAACATTGAAAAACTGTGC
TTCAAAAAAACCATGACCTTTCCCATCATAAGAGAGGAAGAAATAAATGCTAACTTCTCTGGGC
TTTCAATCCAAACATCAGGTCTCTCTTTCGAGTGATTTGTAACTTGATAAAAACTTGGTTGCAT
CTTCTTCGGATATTCATATTTCCTGACACCACATAACAGCCAAGTAAATCATATAAAAATGTCT
CCTCCGTAAAAGAGGAACCACCTAACCCAAGTAATTATCAGTGAAAGATGTTTCTTTTCCAAAT
TCTGGCACAGTAAGTAATCCATCTCTGGTTGTTTGGTTCAAGAAGAATGTATAGTTGATACACT
TGTGCATGCATGCATGTGTATAATCTAAGATTAACTAACTGGATACTGATGCTCAAAGTCACAC
CAGGCCTTAAAATATATACATAAATAAATAGAGCAACACAATTCAGAAGGCTGGTTTTAGTTCC
TAGGCCATAAGGCCAGTAACTGGAAGCTAGGCTCACTACAAAAGCTACTTTGGTCATTTCAATG
GCCAGTCAATGCAGCTCATAGAAACCTGGAAGCAACAGTTTCCAGAAAAGTACCTAAAATAAGG
CTTCAATTTCTTTGCAACAGTTTCCAAGTCATCGTCAGTCAACCCAGTACCAACCCTGCAGAAG
GATATAAATCTGCAAGAAAAGGACCTCTGATCAGGGAGTTGGCAGATTATACCTGGTTAAAGAA
CTTGAGTCTCAAGTTTTACCTGTCATGGTGTCCTCTAAGGGACATTATTCTAATGCTTTTGCTA
AAACTATTGATGCATAATATCAACTATTTGAGCCCACTTAGCTCTCAAAAAGAGTTCTACACTA
AAAAAATTTAATTAAATCCTTTCTGTCCTTTGAGGAGTGAAACCATCAAGGTCCATACAAATTG
GTCCAAATAAGAGCATCCATGCAACTCAACACGTAGCCTGTCCTCACACCTATGCAACAGTGTT
TACTCATAAAGGTTGATTCAACTAAAACCTAAAGCGATAAATGGCTAAAATATTGGTCCTCTGC
GCATTTGAGGCCCACTGTTTTTCTATAAAAGATCAAAGGAGCTAAGAGAGAGAGGTCCTCAAGA
GAATTAACAATGACAATAACAAAATTAACAATCTGTGGTCTACCAAGAGAACCCTACAATGCTC
TGAACTCAAGATTTCAATGTCTCAAACTTCAAAAGGGGCATAGGCTGATATAGATAACAGAACT
GATTTCTGTATGGACCACGGCTCAGCAGACCATCCATAATAAATAAATGTAAAAGATAATAATA
TACAATCCTAAAGGCTTCTATGACCATGGGCAAGACAGCTAAGTTGCTCTGACTATTTTTTTTT
CCCCCCTTTTCTGTAACTATGTCCAACATGTACCAAGACAAGGGAATATAATTATTATAAGCCT
CCAAAGATCTTCCAAGTACATTGAAAAACTTGGGAAAAATAAACATTTCCATGTCAAACATACT
TGCAACCACCACGCACATCCAACTCAAAGTAACATAGCAAGAAAGTAAAAGAAATATTTCACTA
ATATAGGCATAGGTGAACAGCTGAGCTTAGAGACAAGAGAGTTGCTAAATACTACCGCCTGGGG
TAAGCATTGGGGTCTGGACGATCTGCTAGGCCTACTAAGAATTGAGCTACCTGCAAAAGTTAAA
TATAGATAAGAGCGTAAAAAGAAAAAGAAAAGCAAATAAGTAAAAGGGACACAAAACTAACCTC
TCCTCCTCGACGCCCAGAGCCGTAATACCCTCCTAAAAACAAAAATAATAATCTTGAAATGCAC
GCAAGAAATTGCAAGTTTTAACATTGAGACAACATGTGTTACATGGCAAGAAAAGAAATAAAAA
GGTTAAGACGAATATTTCAGACCAATAATGAGAACATCCAAGTCAGAACCAGCCCGAATGTAAT
CAGGCTTCAACTTCAACCACTTCCCACTTCTATCACTTGGTTCCCACTTGGAATTAAGGTCTTT
TATTACAATTCCTTCATCCCTAAGATGATAAGAAGCAGTGCAGCGTCAGAATTGAAAAATAAAA
ATATGGATGACAACAGTGTAATCAATAAGAGCAAAGAATAAACCATAAGCATATCCATAGCAAT
AGGGAAAAAACTAAGCTACTATCTATTTGAAGTAATAATAGGCCTACACCTTTCAAAATAAGCT
CAGATATTTGCAAGGAGGCATTAAGCAATCATAAAAGTTATTATGCCTTTACTAACTTAAAATG
CGTAATTGAGTAAAACCCCTTCTACCTACAAAGAAACAAATATTATCATGAGGGTGTTTTTGAC
ATTTTATATTTTTATATATAATCTATAAAAAATAATTTGAACCCAGAATAAAGCTGCAAGTGGT
AGGGCTTGAACCTAGGACATCAAGGTTCCCAAAGCCTTAATGCTGACATTTTAACCAAAGCCTC
ATTTGTTTTTATATAATTTTTTTATGAATATATTTTCACATAATTTTTTTTCACACACGTTGTA
AGTGTGCTATAATCCAGTCCACATAATATATTTACACACAGTTAAGGTTGCCAAGGTTTGATTC
CTAGGACACTGGAACTAAAAGTCTGCACTCTAACAGCAGACTACAGTTATATCATCATATTGAA
CCAAACCAAGATTCATAGATACAACCCAAAAACTGAAACCCACAAATGACCTGAGATTTCTGCA
AGACCAAACAAATATGAAAAGGGGTATTTCCAAAAGCACAAGTAGTAGATGACAGTTTATTTAC
ACCCATATATGACCAATCAAAAGAAAATTCCAAATCAATGCATATTGCATATACCGAGGAAAAG
CCATACAACTTAATATATATATATATATATATATAAATATATAGATATGAGAAGCTTTTACAAA
AACGACAGACCTATTTTCAATTGTTTCCTTGAAAAATCTCTCAACATCATTCACACTGTGAGCA
ATACATGACCAACAAGGTTCCCCTGCAAGATTAGGGTAGAAATCATTGCTGCTTTTCTCATAAG
TAAAAACTAAAAAAATATTTGTGCAATTCAGAAATTCACAGAACTCGCCATATATTTATACAAT
GGGTAATCATGGGAAAACCCCTAAGTCATACGATATTCACCCACCAGTATGTTGAGAATTTTAA
GTACATAACAAAGGCCCATAATTGCAGAGGCTAAAACATCAGATTAAGACTACAACAGTTAGAA
AATGGAGATTCTTCAAAAGATGTTGTAACAGAACCAAGTGAACCATTAATCATCAAATTCTAAT
TCCACTTGTATTTGTTAACTATGAGACTAGACTACACTCCATCGAATTTCCAGACACAATAGAA
ATCTCCGTATCTCTCCCCTTTTCACTTTGCATACAGCAAACCACTGCTTGATTCTGCATTTGAA
CCAAAAAGGTTGTCTTACTAGCAAGCAGTTCATGTTATTAGCAAATATGAATCAACTCATATCT
ACCGTAGTGGTTCTGGACTTACATAAAAGGTGACATCCATGCTAATTATATAAAGTTATAAATT
CAGCTTGGATCTGGTGTTCAGTTGTTTTCATAAGAAAATGTTGTGTTTGCATGAATAATAAGAG
CCAACTAAAAAACAAAAATTTAAAATACCCAGGAAGGAGGTTGTAATATTACTATTCTTTACCA
GGAGGACGATTTGCATTGAGACCACCATTAGGCACTAAAATCTCTAAGCGACCCTTCAAAGGCT
TCACAACTTTTTGAAGAATCTCATGCCGTTCCTTCAAACTTTGGTGAATAACACTTGTATCCCC
AACATAAAGAATGTCAAATGCAACAT
						
					

			
		

Sequences
Splice junction sequence	TTCAAAGGCTTCACAACTTTTTGAAGAATCTCATGCCGTTCCTTCAAACTTTGGTGAATAACAC TTGTATCCCCAACATAAAGAATGTCAAATGCAACATaaaacataagatttgaaaatattaaggt ttctccctttacgcaggacgtgtcagtccgaataaaatgagaaggaacaatggagacattcttt ctgtctgc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	AAAACATAAGATTTGAAAATATTAAGGTTTCTCCCTTTACGCAGGACGTGTCAGTCCGAATAAA ATGAGAAGGAACAATGGAGACATTCTTTCTGTCTGCCTTTCTAGCATGTGCCTTGTGCTTTGTT TTACTATCAGGCTGGTTTTCCTGTTCTGTCCCTTTTTGAGTGGTACCATTACTTGAATGCACCA GTTCTACAAATGCTGAAACAAAAACAAGAAATTGAAAGAGGACACATGAGTAGACCCCAAAAAT AGAAATTCATTAATTAAAGCAACAATACTTTCTATCCCCTTACATTGCACATCAAGGCACTCAT GCCAAGGCTTGTCATATCTCACTCTATCAATACGTGGAAATCTCAGGCTGTACGGTGCAGCAAA TACCTGAAAAAAATCAAAGAGAACATAAATAAGCATAAATCAAGAGAACAGGAGTAAACAAGTA AATAAAACAAGGAAAATGGGGAAGTCCAAATACTAAAGTAGCACTATTACTTTTGTCTGACCAA AATATAAATTAAAAAATGGCTATAAATACACACCTCAGACCTTATAGTCCTGATATCACTGGTG ATAGAAAGGATGATTGATCTGCAACAAGAAATTGAACATAAAGACAAACATTGAAAAACTGTGC TTCAAAAAAACCATGACCTTTCCCATCATAAGAGAGGAAGAAATAAATGCTAACTTCTCTGGGC TTTCAATCCAAACATCAGGTCTCTCTTTCGAGTGATTTGTAACTTGATAAAAACTTGGTTGCAT CTTCTTCGGATATTCATATTTCCTGACACCACATAACAGCCAAGTAAATCATATAAAAATGTCT CCTCCGTAAAAGAGGAACCACCTAACCCAAGTAATTATCAGTGAAAGATGTTTCTTTTCCAAAT TCTGGCACAGTAAGTAATCCATCTCTGGTTGTTTGGTTCAAGAAGAATGTATAGTTGATACACT TGTGCATGCATGCATGTGTATAATCTAAGATTAACTAACTGGATACTGATGCTCAAAGTCACAC CAGGCCTTAAAATATATACATAAATAAATAGAGCAACACAATTCAGAAGGCTGGTTTTAGTTCC TAGGCCATAAGGCCAGTAACTGGAAGCTAGGCTCACTACAAAAGCTACTTTGGTCATTTCAATG GCCAGTCAATGCAGCTCATAGAAACCTGGAAGCAACAGTTTCCAGAAAAGTACCTAAAATAAGG CTTCAATTTCTTTGCAACAGTTTCCAAGTCATCGTCAGTCAACCCAGTACCAACCCTGCAGAAG GATATAAATCTGCAAGAAAAGGACCTCTGATCAGGGAGTTGGCAGATTATACCTGGTTAAAGAA CTTGAGTCTCAAGTTTTACCTGTCATGGTGTCCTCTAAGGGACATTATTCTAATGCTTTTGCTA AAACTATTGATGCATAATATCAACTATTTGAGCCCACTTAGCTCTCAAAAAGAGTTCTACACTA AAAAAATTTAATTAAATCCTTTCTGTCCTTTGAGGAGTGAAACCATCAAGGTCCATACAAATTG GTCCAAATAAGAGCATCCATGCAACTCAACACGTAGCCTGTCCTCACACCTATGCAACAGTGTT TACTCATAAAGGTTGATTCAACTAAAACCTAAAGCGATAAATGGCTAAAATATTGGTCCTCTGC GCATTTGAGGCCCACTGTTTTTCTATAAAAGATCAAAGGAGCTAAGAGAGAGAGGTCCTCAAGA GAATTAACAATGACAATAACAAAATTAACAATCTGTGGTCTACCAAGAGAACCCTACAATGCTC TGAACTCAAGATTTCAATGTCTCAAACTTCAAAAGGGGCATAGGCTGATATAGATAACAGAACT GATTTCTGTATGGACCACGGCTCAGCAGACCATCCATAATAAATAAATGTAAAAGATAATAATA TACAATCCTAAAGGCTTCTATGACCATGGGCAAGACAGCTAAGTTGCTCTGACTATTTTTTTTT CCCCCCTTTTCTGTAACTATGTCCAACATGTACCAAGACAAGGGAATATAATTATTATAAGCCT CCAAAGATCTTCCAAGTACATTGAAAAACTTGGGAAAAATAAACATTTCCATGTCAAACATACT TGCAACCACCACGCACATCCAACTCAAAGTAACATAGCAAGAAAGTAAAAGAAATATTTCACTA ATATAGGCATAGGTGAACAGCTGAGCTTAGAGACAAGAGAGTTGCTAAATACTACCGCCTGGGG TAAGCATTGGGGTCTGGACGATCTGCTAGGCCTACTAAGAATTGAGCTACCTGCAAAAGTTAAA TATAGATAAGAGCGTAAAAAGAAAAAGAAAAGCAAATAAGTAAAAGGGACACAAAACTAACCTC TCCTCCTCGACGCCCAGAGCCGTAATACCCTCCTAAAAACAAAAATAATAATCTTGAAATGCAC GCAAGAAATTGCAAGTTTTAACATTGAGACAACATGTGTTACATGGCAAGAAAAGAAATAAAAA GGTTAAGACGAATATTTCAGACCAATAATGAGAACATCCAAGTCAGAACCAGCCCGAATGTAAT CAGGCTTCAACTTCAACCACTTCCCACTTCTATCACTTGGTTCCCACTTGGAATTAAGGTCTTT TATTACAATTCCTTCATCCCTAAGATGATAAGAAGCAGTGCAGCGTCAGAATTGAAAAATAAAA ATATGGATGACAACAGTGTAATCAATAAGAGCAAAGAATAAACCATAAGCATATCCATAGCAAT AGGGAAAAAACTAAGCTACTATCTATTTGAAGTAATAATAGGCCTACACCTTTCAAAATAAGCT CAGATATTTGCAAGGAGGCATTAAGCAATCATAAAAGTTATTATGCCTTTACTAACTTAAAATG CGTAATTGAGTAAAACCCCTTCTACCTACAAAGAAACAAATATTATCATGAGGGTGTTTTTGAC ATTTTATATTTTTATATATAATCTATAAAAAATAATTTGAACCCAGAATAAAGCTGCAAGTGGT AGGGCTTGAACCTAGGACATCAAGGTTCCCAAAGCCTTAATGCTGACATTTTAACCAAAGCCTC ATTTGTTTTTATATAATTTTTTTATGAATATATTTTCACATAATTTTTTTTCACACACGTTGTA AGTGTGCTATAATCCAGTCCACATAATATATTTACACACAGTTAAGGTTGCCAAGGTTTGATTC CTAGGACACTGGAACTAAAAGTCTGCACTCTAACAGCAGACTACAGTTATATCATCATATTGAA CCAAACCAAGATTCATAGATACAACCCAAAAACTGAAACCCACAAATGACCTGAGATTTCTGCA AGACCAAACAAATATGAAAAGGGGTATTTCCAAAAGCACAAGTAGTAGATGACAGTTTATTTAC ACCCATATATGACCAATCAAAAGAAAATTCCAAATCAATGCATATTGCATATACCGAGGAAAAG CCATACAACTTAATATATATATATATATATATATAAATATATAGATATGAGAAGCTTTTACAAA AACGACAGACCTATTTTCAATTGTTTCCTTGAAAAATCTCTCAACATCATTCACACTGTGAGCA ATACATGACCAACAAGGTTCCCCTGCAAGATTAGGGTAGAAATCATTGCTGCTTTTCTCATAAG TAAAAACTAAAAAAATATTTGTGCAATTCAGAAATTCACAGAACTCGCCATATATTTATACAAT GGGTAATCATGGGAAAACCCCTAAGTCATACGATATTCACCCACCAGTATGTTGAGAATTTTAA GTACATAACAAAGGCCCATAATTGCAGAGGCTAAAACATCAGATTAAGACTACAACAGTTAGAA AATGGAGATTCTTCAAAAGATGTTGTAACAGAACCAAGTGAACCATTAATCATCAAATTCTAAT TCCACTTGTATTTGTTAACTATGAGACTAGACTACACTCCATCGAATTTCCAGACACAATAGAA ATCTCCGTATCTCTCCCCTTTTCACTTTGCATACAGCAAACCACTGCTTGATTCTGCATTTGAA CCAAAAAGGTTGTCTTACTAGCAAGCAGTTCATGTTATTAGCAAATATGAATCAACTCATATCT ACCGTAGTGGTTCTGGACTTACATAAAAGGTGACATCCATGCTAATTATATAAAGTTATAAATT CAGCTTGGATCTGGTGTTCAGTTGTTTTCATAAGAAAATGTTGTGTTTGCATGAATAATAAGAG CCAACTAAAAAACAAAAATTTAAAATACCCAGGAAGGAGGTTGTAATATTACTATTCTTTACCA GGAGGACGATTTGCATTGAGACCACCATTAGGCACTAAAATCTCTAAGCGACCCTTCAAAGGCT TCACAACTTTTTGAAGAATCTCATGCCGTTCCTTCAAACTTTGGTGAATAACACTTGTATCCCC AACATAAAGAATGTCAAATGCAACAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							ghi_circ_000219* gra_circ_001463* ghi_circ_000434* 						
					
						PMCS

Conservation Information
Conserved circRNAs	ghi_circ_000219* gra_circ_001463* ghi_circ_000434*
PMCS

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							126800144-126799378(-)
126803750-126799388(+)
						
						Potential amino acid sequence
						
							MQPSFYQVTNHSKERPDVWIESPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDRVRYDKPWH
ECLDVQSFVELVHSSNGTTQKGTEQENQPDSKTKHKAHARKADRKNVSIVPSHFIRTDTSCVKG
ETLIFSNLMFYVAFDILYVGDTSVIHQSLKERHEILQKVVKPLKGRLEILVPNGGLNANRPPGE
PCWSCIAHSVNDVERFFKETIENRDEGIVIKDLNSKWEPSDRSGKWLKLKPDYIRAGSDLDVLI
IGGYYGSGRRGGEVAQFLVGLADRPDPNAYPRRFISFCRVGTGLTDDDLETVAKKLKPYFRKYE
YPKKMQPSFYQVTNHSKERPDVWIESPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDRVRYD
KPWHECLDVQSFVELVHSSNGTTQKGTEQENQPDSKTKHKAHARKADRKNVSIVPSHFIRTDTS
CVKGETLIFSNLMFYVAFDILYVGDTSVIHQSLKERHEILQKVVKPLKGRLEILVPNGGLNANR
PPGEPCWSCIAHSVNDVERFFKETIENRDEGIVIKDLNSKWEPSDRSGKWLKLKPDYIRAGSDL
DVLIIGGYYGSGRRGGEVAQFLVGLADRPDPNAYPRRFISFCRVGTGLTDDDLETVAKKLKPYF
RKYEYPKKMQPSFYQVTNHSKERPDVWIESPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDR
VRYDKPWHECLDVQSFVELVHSSNGTTQKGTEQENQPDSKTKHKAHARKADRKNVSIVPSHFIR
TDTSCVKGETLIFSNLMFYVAFDILYVGDTSVIHQSLKERHEILQKVVKPLKGRLEILVPNGGL
NANRPPGEPCWSCIAHSVNDVERFFKETIENRDEGIVIKDLNSKWEPSDRSGKWLKLKPDYIRA
GSDLDVLIIGGYYGSGRRGGEVAQFLVGLADRPDPNAYPRRFISFCRVGTGLTDDDLETVAKKL
KPYFRKYEYPKKMQPSFYQVTNHSKERPDVWIESPEKSIILSITSDIRTIRSEVFAAPYSLRFP
RIDRVRYDKPWHECLDVQSFVELVHSSNGTTQKGTEQENQPDSKTKHKAHARKADRKNVSIVPS
HFIRTDTSCVKGETLIFSNLMF(-)
MPFLQTLVNNTCIPNIKNVKCNIKHKI*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	126800144-126799378(-) 126803750-126799388(+)
Potential amino acid sequence	MQPSFYQVTNHSKERPDVWIESPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDRVRYDKPWH ECLDVQSFVELVHSSNGTTQKGTEQENQPDSKTKHKAHARKADRKNVSIVPSHFIRTDTSCVKG ETLIFSNLMFYVAFDILYVGDTSVIHQSLKERHEILQKVVKPLKGRLEILVPNGGLNANRPPGE PCWSCIAHSVNDVERFFKETIENRDEGIVIKDLNSKWEPSDRSGKWLKLKPDYIRAGSDLDVLI IGGYYGSGRRGGEVAQFLVGLADRPDPNAYPRRFISFCRVGTGLTDDDLETVAKKLKPYFRKYE YPKKMQPSFYQVTNHSKERPDVWIESPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDRVRYD KPWHECLDVQSFVELVHSSNGTTQKGTEQENQPDSKTKHKAHARKADRKNVSIVPSHFIRTDTS CVKGETLIFSNLMFYVAFDILYVGDTSVIHQSLKERHEILQKVVKPLKGRLEILVPNGGLNANR PPGEPCWSCIAHSVNDVERFFKETIENRDEGIVIKDLNSKWEPSDRSGKWLKLKPDYIRAGSDL DVLIIGGYYGSGRRGGEVAQFLVGLADRPDPNAYPRRFISFCRVGTGLTDDDLETVAKKLKPYF RKYEYPKKMQPSFYQVTNHSKERPDVWIESPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDR VRYDKPWHECLDVQSFVELVHSSNGTTQKGTEQENQPDSKTKHKAHARKADRKNVSIVPSHFIR TDTSCVKGETLIFSNLMFYVAFDILYVGDTSVIHQSLKERHEILQKVVKPLKGRLEILVPNGGL NANRPPGEPCWSCIAHSVNDVERFFKETIENRDEGIVIKDLNSKWEPSDRSGKWLKLKPDYIRA GSDLDVLIIGGYYGSGRRGGEVAQFLVGLADRPDPNAYPRRFISFCRVGTGLTDDDLETVAKKL KPYFRKYEYPKKMQPSFYQVTNHSKERPDVWIESPEKSIILSITSDIRTIRSEVFAAPYSLRFP RIDRVRYDKPWHECLDVQSFVELVHSSNGTTQKGTEQENQPDSKTKHKAHARKADRKNVSIVPS HFIRTDTSCVKGETLIFSNLMF(-) MPFLQTLVNNTCIPNIKNVKCNIKHKI*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of Cotton_A_27324_circ_g.1

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