Plant Circular RNA Database

Detail information of BGIOSGA005852_circ_g.4

			
						 General Information
					
						CircRNA Name
						BGIOSGA005852_circ_g.4
					
						ID in PlantcircBase
						osi_circ_004171
					
						Alias
						2:29294097|29298373
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr2: 29294097-29298373  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA005852						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							BGIOSGA005852_circ_g.1 BGIOSGA005852_circ_g.2 BGIOSGA005852_circ_g.3 BGIOSGA005852_circ_g.5 BGIOSGA005852_circ_g.6 BGIOSGA005852_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA005852-TA:7

General Information
CircRNA Name	BGIOSGA005852_circ_g.4
ID in PlantcircBase	osi_circ_004171
Alias	2:29294097\|29298373
Organism	Oryza sativa ssp. indica
Position	chr2: 29294097-29298373 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA005852
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	BGIOSGA005852_circ_g.1 BGIOSGA005852_circ_g.2 BGIOSGA005852_circ_g.3 BGIOSGA005852_circ_g.5 BGIOSGA005852_circ_g.6 BGIOSGA005852_circ_g.7
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA005852-TA:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCTCCGCCTCAGTGTCCCTCGTCATCGCGCCGCCCGCGCTAGAACCAGCGCCAGTGCCGCCGCC
GAGCATCCGCCCGCCGATGCCACCGCCGGCGTTGTCactggccctgaggagtgaaaccgagttc
ccatcccgctgccccttggcgatctgggtcatctcctgcatggggcctccattgctgaggatgt
cccactcc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ACTGGCCCTGAGGAGTGAAACCGAGTTCCCATCCCGCTGCCCCTTGGCGATCTGGGTCATCTCC
TGCATGGGGCCTCCATTGCTGAGGATGTCCCACTCCGCACGCAGCTGCTCATCGCGCAGGAAGT
TGAAGAGCTTCTCCGGAGCCACGGGCACCCACACCGAGGTGGCCGCGCTCAGCACCACGCCCGG
TGGCTCTCCAGGCTCGCTCACGCTCTTCCGTGCCATCACGCGCACGTCCTCCCCGATGCTACCG
GTCGCACCATCCAGCTTGCTCCATTCACGTGCAGACGATGCGCTCACCCCAGCACAGAAGTTCT
CCGTCATCCGGCGTGCCAGCTTCAGCATGCTTCGTTTGCCCTCTTGCGATATAGCTGCATGCAT
CAAATGCAACACGTAATTATCAGTATTCCAAGCCAAGATATCTGTCCTACAACTGCACTGGCCA
TTCTACTCGAACAATGGAGATATTCTTTCAGTTTGTCCTGTTTGAATGACGTCAACCGAAATGA
ATTCCATGCAAAATTTGCGCACAGTTGATTCCGCAAATTGAGCTCGTTTTAGATGGAAAATGGC
AAGTAGAGGTTCAGAATTTCCTGTACCAGTCGAGTCATTTGCTGTCACTGTAGCAGAGGACATG
AGGATGGCAAGGCATTCGCATTGGCGCTGCAGCGTCGCAAGCCAACGCCTGGCGCCAAAGGCGA
GACCAGACCGAAGGAGTGGACGGTAGAGCTGGTGCACTGATGCCTCATCGTATTCCGTATGCTC
AACCCATGTGACCTACAGGGTAAATGCATCCGTTAGCCCATAAATGCACGCCCACATGCATGTG
TCTTTAGGTGCAATACATCAGATGAGAGCTCTGCAGTGCAATACAACACCCTACTGTGGCTTCA
CAGTGCAGAGCACATTTTTGTTTTTACCCTAAGTTTTCTTCCCCTCTTTGCTGTTGGTCAAGTA
GGGGCAGAAACGTAAAAAATGTGCAAGGTTTGCCTGTTAACCAGCCTCGAGATGTGAACCTATA
CTGTTGACCACCAACAAGTAACTTGGCATTAGCGTATAATTTGTTTAGTTACTAATTTATATCT
GGCCTAAGGGTTGAGACATTTTGATCTGTTGTTATTCATACGCAAACAGACTAAGAACTGGATT
CATCCGAAATAATGTATCAAGAAAGCAAGGAGTGCACAGTACGGGAAAAGAGTACACATGAGGG
AACTACTGAAGAAAGATTTTCATATCTTGAGCAACATAAAAAAATAACACAAAGAAACAACAGC
AGATGTCTGTGCACATGGATTAGCCAACAAATTTCAATCATTTCGATCAAGAGTGCAACATTGT
TAATTCATTGCCATGCGATATACCCAAACTTCTGAATGATGCGTGCAACTAGTTTTTTTTATTT
TTAGGGCGTGCATGCCAACTAGTTTAAGAGTTATTTCTCCATCTGAACTCTTCAAGAAAGTGAA
TGAACTCACCAACATGATGTGCATATCATAAACCAGCATGTGATTAAGTTGACAAAGGAATAGT
AGAACCAAATATGTTTCCTAAAAGCCCCTAGATCAGGTGGTATTTCTACTGAAATCCCTAATCC
CATCCAACTGCTCTTTACTTCAAATCTATTAAAAACAGATTAGATGCCGGATATGTTGTTGGTT
TGTTCACCTTAGAAATTCTAAACAAAATGTTTCCTTCATTAGTGCCACAGATTGAGATCAAATT
AAGAATTGTGAAAACCCAAGGACATAGAGACCAATTTTTCAACCAAATAGGAGCAAGTGGTCCA
GATTTCAACATGTAAGGGACATATTGATTAAATTGCGGACAAGAAGTTACCCAAGGTGCACCAT
CCAAGGGGTAGAAGCATCTAATCCCCTAGGAAAGTTGGAGCTAAGAATAAACAAGCAAAAGAAA
ACATGTTTGGGGAACAGTGTTGGATCCACAAAAACACTTAATTATTCTAAATAAATTGTATACT
CCATCTCCTCGTTGACCAAACGAATTGTTTATTTTGGGTAGTGGGCTCATAACCCTAATTAACC
TATTAGGCCTTGACTTGTGAACACTATGCTGCATGGGCATCAGCAAATCGCACCATTAAACTAA
TCACACACTCTTAAACAAACGTCATCCCCAAGTTCTGAGCAGTGCATAGTGATAGTGGTAGTGG
AGAAGTAGTGGAATTAACATAGCTCTAAAACGCCGGGGTAAACTTTGACCAGTTACTTCGATGT
AAAAAATCCAGCAGTCCCTTTCAAAATAAAAAATAAAAAAAATCCAGCAATCCTGTTCAGAACT
ACAAGATGACAATACTGTTAACTGACTTACTGCCACATTAATCATAGTGAACCATTATTGTGAG
AGAACAGAGAAACCATTTAAATGGCTTCTTGTTAGTTGTTACCTTGCAATACCCATTGGGAGTG
TCTTGCATCACACAGCCGGAAGGTACCCTCCTACACTTCACATTTCCACCTGTGGGTGCCGTTC
CAGAATTATGATCTCTCACTAAACCATCAATGGACACATCAACTACTGCCCATGCACCCTCAGC
CAGCTGCTTACAAAACCGGAGAAATGTAACCTCCCTAATTGGTACTAGAGGTGAGAGCACCTGT
AGCTCAGCCTTCATCTGTTGCAAGCAAACACAAGAAAAATTAACAATTCAGAAAGAAAATATGT
TAGCTACGTCTTACACTATGTAAGATAAATGAACATTAGCACTGTTGATCAGCACTCACCAGCA
GCAACGCGCCATTTCTGCTTCCTGCAATGCCGGTAGACACCTCCTCAAGCACTGTTGCCTTAGC
AATCATGCACGAGAACATGTCAGACCACCGTCTCTGTGAAATGAATGGAAGTAACACCAACATT
AGTACATTATAGGATTGGAACGGAACATAAGTATACGGTGCGAAATGTGGAGGACATTAGCCCA
AACCTCATCCATGAGGGTCTCTACAAGGGCAAGGCTGTTGTCGATGATGACTAGACCGGATTCC
CTCGAGGCCTCAGAGACGTAGCCGGCAGGCTTCATGCCAATGCACGGTAGGAAGGAGTGAAGAT
ACTCCTCAAAGTTGAGCACCTCCTTGCTGGGAGAACCAGGCAGTGCCGGAACCCACAATGGATC
GTCCATCTGTGCCATCTTGACAAGTTCGTCCATCGCGCTGATTGCAAGCTCTAAGAACACGGAC
CTGTCGATGTTACCCACCAGCGATGGTATAGCAGCCCCGGTTGCGCGCGCAGGCGTGATCACCG
TGCCCATCGGGCTCGACACGCCTCCGGCGAACTCATTCATACAGCCGGGTAGTGTACCGAGAGA
CCCTAAGCCACCGATGCCTCCGATCGCTAGCTCCAGCGACGAGTTAGGCATAGGCAGCGAGAGG
TGCGGCTGCAGCAAGGGCGGCGGCGACAGGAGGGAGATGGGCTTGCCTAGGAACTTGGTGGCGA
GGGCGCACACACGGTTGAGCTCGTCCTTGAGGCGCGCATTCTCGATGCGCAGGTGCTGCTCCTC
TAGGGACACCTCCCCGAGCATGGCGGGGCTCCCGCAGCTGCCGCACATTGGGCTGCGCATCGCC
TCCCGGATCGTCATGTTCTCGGCGCGCAGCTTGTCGTTCTCCTGCTTGAGAAGCGCGTTCTCGT
GCCGCTCCAGTTGCGTCTTGGTAAAACGAAGATCGCGGCGCGCGCGGGGGGATCATGAAACCGT
GTCAGGAAATTGCACGAAACGAACCGGCTCGAACGCCGACGAGAGAAGAAGACTAAGGCACACG
ATGCGATGTTCTCGCGGATGATTTACCTTCATCTGCGTGCGGCGATTCTGGAACCAGAACTTGA
CCTGCCGCGCATCGAGGGAGAGCCTCCTGCTGAGCTCGGCGCGCTGCTTCTCGTCCGGATGGGG
GCACTCCTTGAACAGCCTACACAAGACGGACGCATCGATCCATGCATGAGAGGACAAAGAGAAA
AAGGTTGGCACAGAGGAGAAGGATGCAAAGTACGAGCGAGCGTTGAGAGGGGAATTTGCTTTAC
GCTTCGAGCTCTTGGATCTGCTGCGGCGTGTGGCGGTGGTATCGCTTCTTCCTCTTGCGGGAGT
TGCTGGGCTCGGCGTCCTCGACGTCGTCCTCGCCGGCGGCCGAGATGGCGTCGAGATGGTCGCT
TCCCGACCGGCTGTCGTTCTCCGCCTCAGTGTCCCTCGTCATCGCGCCGCCCGCGCTAGAACCA
GCGCCAGTGCCGCCGCCGAGCATCCGCCCGCCGATGCCACCGCCGGCGTTGTC
						
					

			
		

Sequences
Splice junction sequence	TCTCCGCCTCAGTGTCCCTCGTCATCGCGCCGCCCGCGCTAGAACCAGCGCCAGTGCCGCCGCC GAGCATCCGCCCGCCGATGCCACCGCCGGCGTTGTCactggccctgaggagtgaaaccgagttc ccatcccgctgccccttggcgatctgggtcatctcctgcatggggcctccattgctgaggatgt cccactcc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ACTGGCCCTGAGGAGTGAAACCGAGTTCCCATCCCGCTGCCCCTTGGCGATCTGGGTCATCTCC TGCATGGGGCCTCCATTGCTGAGGATGTCCCACTCCGCACGCAGCTGCTCATCGCGCAGGAAGT TGAAGAGCTTCTCCGGAGCCACGGGCACCCACACCGAGGTGGCCGCGCTCAGCACCACGCCCGG TGGCTCTCCAGGCTCGCTCACGCTCTTCCGTGCCATCACGCGCACGTCCTCCCCGATGCTACCG GTCGCACCATCCAGCTTGCTCCATTCACGTGCAGACGATGCGCTCACCCCAGCACAGAAGTTCT CCGTCATCCGGCGTGCCAGCTTCAGCATGCTTCGTTTGCCCTCTTGCGATATAGCTGCATGCAT CAAATGCAACACGTAATTATCAGTATTCCAAGCCAAGATATCTGTCCTACAACTGCACTGGCCA TTCTACTCGAACAATGGAGATATTCTTTCAGTTTGTCCTGTTTGAATGACGTCAACCGAAATGA ATTCCATGCAAAATTTGCGCACAGTTGATTCCGCAAATTGAGCTCGTTTTAGATGGAAAATGGC AAGTAGAGGTTCAGAATTTCCTGTACCAGTCGAGTCATTTGCTGTCACTGTAGCAGAGGACATG AGGATGGCAAGGCATTCGCATTGGCGCTGCAGCGTCGCAAGCCAACGCCTGGCGCCAAAGGCGA GACCAGACCGAAGGAGTGGACGGTAGAGCTGGTGCACTGATGCCTCATCGTATTCCGTATGCTC AACCCATGTGACCTACAGGGTAAATGCATCCGTTAGCCCATAAATGCACGCCCACATGCATGTG TCTTTAGGTGCAATACATCAGATGAGAGCTCTGCAGTGCAATACAACACCCTACTGTGGCTTCA CAGTGCAGAGCACATTTTTGTTTTTACCCTAAGTTTTCTTCCCCTCTTTGCTGTTGGTCAAGTA GGGGCAGAAACGTAAAAAATGTGCAAGGTTTGCCTGTTAACCAGCCTCGAGATGTGAACCTATA CTGTTGACCACCAACAAGTAACTTGGCATTAGCGTATAATTTGTTTAGTTACTAATTTATATCT GGCCTAAGGGTTGAGACATTTTGATCTGTTGTTATTCATACGCAAACAGACTAAGAACTGGATT CATCCGAAATAATGTATCAAGAAAGCAAGGAGTGCACAGTACGGGAAAAGAGTACACATGAGGG AACTACTGAAGAAAGATTTTCATATCTTGAGCAACATAAAAAAATAACACAAAGAAACAACAGC AGATGTCTGTGCACATGGATTAGCCAACAAATTTCAATCATTTCGATCAAGAGTGCAACATTGT TAATTCATTGCCATGCGATATACCCAAACTTCTGAATGATGCGTGCAACTAGTTTTTTTTATTT TTAGGGCGTGCATGCCAACTAGTTTAAGAGTTATTTCTCCATCTGAACTCTTCAAGAAAGTGAA TGAACTCACCAACATGATGTGCATATCATAAACCAGCATGTGATTAAGTTGACAAAGGAATAGT AGAACCAAATATGTTTCCTAAAAGCCCCTAGATCAGGTGGTATTTCTACTGAAATCCCTAATCC CATCCAACTGCTCTTTACTTCAAATCTATTAAAAACAGATTAGATGCCGGATATGTTGTTGGTT TGTTCACCTTAGAAATTCTAAACAAAATGTTTCCTTCATTAGTGCCACAGATTGAGATCAAATT AAGAATTGTGAAAACCCAAGGACATAGAGACCAATTTTTCAACCAAATAGGAGCAAGTGGTCCA GATTTCAACATGTAAGGGACATATTGATTAAATTGCGGACAAGAAGTTACCCAAGGTGCACCAT CCAAGGGGTAGAAGCATCTAATCCCCTAGGAAAGTTGGAGCTAAGAATAAACAAGCAAAAGAAA ACATGTTTGGGGAACAGTGTTGGATCCACAAAAACACTTAATTATTCTAAATAAATTGTATACT CCATCTCCTCGTTGACCAAACGAATTGTTTATTTTGGGTAGTGGGCTCATAACCCTAATTAACC TATTAGGCCTTGACTTGTGAACACTATGCTGCATGGGCATCAGCAAATCGCACCATTAAACTAA TCACACACTCTTAAACAAACGTCATCCCCAAGTTCTGAGCAGTGCATAGTGATAGTGGTAGTGG AGAAGTAGTGGAATTAACATAGCTCTAAAACGCCGGGGTAAACTTTGACCAGTTACTTCGATGT AAAAAATCCAGCAGTCCCTTTCAAAATAAAAAATAAAAAAAATCCAGCAATCCTGTTCAGAACT ACAAGATGACAATACTGTTAACTGACTTACTGCCACATTAATCATAGTGAACCATTATTGTGAG AGAACAGAGAAACCATTTAAATGGCTTCTTGTTAGTTGTTACCTTGCAATACCCATTGGGAGTG TCTTGCATCACACAGCCGGAAGGTACCCTCCTACACTTCACATTTCCACCTGTGGGTGCCGTTC CAGAATTATGATCTCTCACTAAACCATCAATGGACACATCAACTACTGCCCATGCACCCTCAGC CAGCTGCTTACAAAACCGGAGAAATGTAACCTCCCTAATTGGTACTAGAGGTGAGAGCACCTGT AGCTCAGCCTTCATCTGTTGCAAGCAAACACAAGAAAAATTAACAATTCAGAAAGAAAATATGT TAGCTACGTCTTACACTATGTAAGATAAATGAACATTAGCACTGTTGATCAGCACTCACCAGCA GCAACGCGCCATTTCTGCTTCCTGCAATGCCGGTAGACACCTCCTCAAGCACTGTTGCCTTAGC AATCATGCACGAGAACATGTCAGACCACCGTCTCTGTGAAATGAATGGAAGTAACACCAACATT AGTACATTATAGGATTGGAACGGAACATAAGTATACGGTGCGAAATGTGGAGGACATTAGCCCA AACCTCATCCATGAGGGTCTCTACAAGGGCAAGGCTGTTGTCGATGATGACTAGACCGGATTCC CTCGAGGCCTCAGAGACGTAGCCGGCAGGCTTCATGCCAATGCACGGTAGGAAGGAGTGAAGAT ACTCCTCAAAGTTGAGCACCTCCTTGCTGGGAGAACCAGGCAGTGCCGGAACCCACAATGGATC GTCCATCTGTGCCATCTTGACAAGTTCGTCCATCGCGCTGATTGCAAGCTCTAAGAACACGGAC CTGTCGATGTTACCCACCAGCGATGGTATAGCAGCCCCGGTTGCGCGCGCAGGCGTGATCACCG TGCCCATCGGGCTCGACACGCCTCCGGCGAACTCATTCATACAGCCGGGTAGTGTACCGAGAGA CCCTAAGCCACCGATGCCTCCGATCGCTAGCTCCAGCGACGAGTTAGGCATAGGCAGCGAGAGG TGCGGCTGCAGCAAGGGCGGCGGCGACAGGAGGGAGATGGGCTTGCCTAGGAACTTGGTGGCGA GGGCGCACACACGGTTGAGCTCGTCCTTGAGGCGCGCATTCTCGATGCGCAGGTGCTGCTCCTC TAGGGACACCTCCCCGAGCATGGCGGGGCTCCCGCAGCTGCCGCACATTGGGCTGCGCATCGCC TCCCGGATCGTCATGTTCTCGGCGCGCAGCTTGTCGTTCTCCTGCTTGAGAAGCGCGTTCTCGT GCCGCTCCAGTTGCGTCTTGGTAAAACGAAGATCGCGGCGCGCGCGGGGGGATCATGAAACCGT GTCAGGAAATTGCACGAAACGAACCGGCTCGAACGCCGACGAGAGAAGAAGACTAAGGCACACG ATGCGATGTTCTCGCGGATGATTTACCTTCATCTGCGTGCGGCGATTCTGGAACCAGAACTTGA CCTGCCGCGCATCGAGGGAGAGCCTCCTGCTGAGCTCGGCGCGCTGCTTCTCGTCCGGATGGGG GCACTCCTTGAACAGCCTACACAAGACGGACGCATCGATCCATGCATGAGAGGACAAAGAGAAA AAGGTTGGCACAGAGGAGAAGGATGCAAAGTACGAGCGAGCGTTGAGAGGGGAATTTGCTTTAC GCTTCGAGCTCTTGGATCTGCTGCGGCGTGTGGCGGTGGTATCGCTTCTTCCTCTTGCGGGAGT TGCTGGGCTCGGCGTCCTCGACGTCGTCCTCGCCGGCGGCCGAGATGGCGTCGAGATGGTCGCT TCCCGACCGGCTGTCGTTCTCCGCCTCAGTGTCCCTCGTCATCGCGCCGCCCGCGCTAGAACCA GCGCCAGTGCCGCCGCCGAGCATCCGCCCGCCGATGCCACCGCCGGCGTTGTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							29298345-29294099(-)
29294130-29298297(-)
29297996-29294111(+)
29297304-29294823(+)
						
					

						Potential amino acid sequence
						
							MLGGGTGAGSSAGGAMTRDTEAENDSRSGSDHLDAISAAGEDDVEDAEPSNSRKRKKRYHRHTP
QQIQELEALFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDK
LRAENMTIREAMRSPMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISL
LSPPPLLQPHLSLPMPNSSLELAIGGIGGLGSLGTLPGCMNEFAGGVSSPMGTVITPARATGAA
IPSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSFLPCIGMK
PAGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLL
MKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVPSG
CVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAILMSSAT
VTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGATGSIGEDVRVMARKSVSE
PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILSNGGPMQEMTQIAKGQRDGNSVSL
LRASDNAGGGIGGRMLGGGTGAGSSAGGAMTRDTEAENDSRSGSDHLDAISAAGEDDVEDAEPS
NSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMKTQL
ERHENALLKQENDKLRAENMTIREAMRSPMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRV
CALATKFLGKPISLLSPPPLLQPHLSLPMPNSSLELAIGGIGGLGSLGTLPGCMNEFAGGVSSP
MGTVITPARATGAAIPSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNF
EEYLHSFLPCIGMKPAGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEV
STGIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTA
PTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQ
RQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGATGSI
GEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILSNGGPMQEMT
QIAKGQRDGNSVSLLRASDNAGGGIGGRMLGGGTGAGSSAGGAMTRDTEAENDSRSGSDHLDAI
SAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLDARQVK
FWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIREAMRSPMCGSCGSPAMLGEVSLEEQHL
RIENARLKDELNRVCALATKFLGKPISLLSPPPLLQPHLSLPMPNSSLELAIGGIGGLGSLGTL
PGCMNEFAGGVSSPMGTVITPARATGAAIPSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWV
PALPGSPSKEVLNFEEYLHSFLPCIGMKPAGYVSEASRESGLVIIDNSLALVETLMDERRWSDM
FSCMIAKATVLEEVSTGIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDV
SIDGLVRDHNSGTAPTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRS
GLAFGARRWLATLQRQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASS
AREWSKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAE
WDILSNGGPMQEMTQIAKGQRDGNSVSLLRASDNAGGGIGGRMLGGGTGAGSSAGGAMTRDTEA
ENDSRSGSDHLDAISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRA
ELSRRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIREAMRSPMCGSCGS
PAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISLLSPPPLLQPHLSLPMPNSSLEL
AIGGIGGLGSLGTLPGCMNEFAGGVSSPMGTVITPARATGAAIPSLVGNIDRSVFLELAISAMD
ELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSFLPCIGMKPAGYVSEASRESGLVIIDNSLA
LVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLMKAELQVLSPLVPIREVTFLRF
CKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYD
EASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAILMSSATVTANDSTAISQEGKRSMLKLAR
RMTENFCAGVSASSAREWSKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPE
KLFNFLRDEQLRAEWDILSNGGPMQEMTQIAKGQRDGNSVSLLRAS(-)
MGTRFHSSGPVTTPAVASAGGCSAAALALVLARAAR*(-)
MGALLEQRFELLDLLRRVAVVSLLPLAGVAGLGVLDVVLAGGRDGVEMVASRPAVVLRLSVPRH
RAARARTSASAAAEHPPADATAGVVTGPEE*(+)
MLPTSDGIAAPVARAGVITVPIGLDTPPANSFIQPGSVPRDPKPPMPPIASSSDELGIGSERCG
CSKGGGDRREMGLPRNLVARAHTRLSSSLRRAFSMRRCCSSRDTSPSMAGLPQLPHIGLRIASR
IVMFSARSLSFSCLRSAFSCRSSCVFICVRRFWNQNLTCRASRESLLLSSARCFSSGWGHSLNS
ASSSWICCGVWRWYRFFLLRELLGSASSTSSSPAAEMASRWSLPDRLSFSASVSLVIAPPALEP
APVPPPSIRPPMPPPALSLALRSETEFPSRCPLAIWVISCMGPPLLRMSHSARSCSSRRKLKSF
SGATGTHTEVAALSTTPGGSPGSLTLFRAITRTSSPMLPVAPSSLLHSRADDALTPAQKFSVIR
RASFSMLRLPSCDIAVESFAVTVAEDMRMARHSHWRCSVASQRLAPKARPDRRSGR*(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	29298345-29294099(-) 29294130-29298297(-) 29297996-29294111(+) 29297304-29294823(+)
Potential amino acid sequence	MLGGGTGAGSSAGGAMTRDTEAENDSRSGSDHLDAISAAGEDDVEDAEPSNSRKRKKRYHRHTP QQIQELEALFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDK LRAENMTIREAMRSPMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISL LSPPPLLQPHLSLPMPNSSLELAIGGIGGLGSLGTLPGCMNEFAGGVSSPMGTVITPARATGAA IPSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSFLPCIGMK PAGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLL MKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVPSG CVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAILMSSAT VTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGATGSIGEDVRVMARKSVSE PGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILSNGGPMQEMTQIAKGQRDGNSVSL LRASDNAGGGIGGRMLGGGTGAGSSAGGAMTRDTEAENDSRSGSDHLDAISAAGEDDVEDAEPS NSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMKTQL ERHENALLKQENDKLRAENMTIREAMRSPMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRV CALATKFLGKPISLLSPPPLLQPHLSLPMPNSSLELAIGGIGGLGSLGTLPGCMNEFAGGVSSP MGTVITPARATGAAIPSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNF EEYLHSFLPCIGMKPAGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEV STGIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTA PTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQ RQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGATGSI GEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILSNGGPMQEMT QIAKGQRDGNSVSLLRASDNAGGGIGGRMLGGGTGAGSSAGGAMTRDTEAENDSRSGSDHLDAI SAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLDARQVK FWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIREAMRSPMCGSCGSPAMLGEVSLEEQHL RIENARLKDELNRVCALATKFLGKPISLLSPPPLLQPHLSLPMPNSSLELAIGGIGGLGSLGTL PGCMNEFAGGVSSPMGTVITPARATGAAIPSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWV PALPGSPSKEVLNFEEYLHSFLPCIGMKPAGYVSEASRESGLVIIDNSLALVETLMDERRWSDM FSCMIAKATVLEEVSTGIAGSRNGALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDV SIDGLVRDHNSGTAPTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRS GLAFGARRWLATLQRQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASS AREWSKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAE WDILSNGGPMQEMTQIAKGQRDGNSVSLLRASDNAGGGIGGRMLGGGTGAGSSAGGAMTRDTEA ENDSRSGSDHLDAISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRA ELSRRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIREAMRSPMCGSCGS PAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISLLSPPPLLQPHLSLPMPNSSLEL AIGGIGGLGSLGTLPGCMNEFAGGVSSPMGTVITPARATGAAIPSLVGNIDRSVFLELAISAMD ELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSFLPCIGMKPAGYVSEASRESGLVIIDNSLA LVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLMKAELQVLSPLVPIREVTFLRF CKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYD EASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAILMSSATVTANDSTAISQEGKRSMLKLAR RMTENFCAGVSASSAREWSKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPE KLFNFLRDEQLRAEWDILSNGGPMQEMTQIAKGQRDGNSVSLLRAS(-) MGTRFHSSGPVTTPAVASAGGCSAAALALVLARAAR(-) MGALLEQRFELLDLLRRVAVVSLLPLAGVAGLGVLDVVLAGGRDGVEMVASRPAVVLRLSVPRH RAARARTSASAAAEHPPADATAGVVTGPEE(+) MLPTSDGIAAPVARAGVITVPIGLDTPPANSFIQPGSVPRDPKPPMPPIASSSDELGIGSERCG CSKGGGDRREMGLPRNLVARAHTRLSSSLRRAFSMRRCCSSRDTSPSMAGLPQLPHIGLRIASR IVMFSARSLSFSCLRSAFSCRSSCVFICVRRFWNQNLTCRASRESLLLSSARCFSSGWGHSLNS ASSSWICCGVWRWYRFFLLRELLGSASSTSSSPAAEMASRWSLPDRLSFSASVSLVIAPPALEP APVPPPSIRPPMPPPALSLALRSETEFPSRCPLAIWVISCMGPPLLRMSHSARSCSSRRKLKSF SGATGTHTEVAALSTTPGGSPGSLTLFRAITRTSSPMLPVAPSSLLHSRADDALTPAQKFSVIR RASFSMLRLPSCDIAVESFAVTVAEDMRMARHSHWRCSVASQRLAPKARPDRRSGR*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA005852_circ_g.4

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