Plant Circular RNA Database

Detail information of Zm00001d035089_circ_g.3

			
						 General Information
					
						CircRNA Name
						Zm00001d035089_circ_g.3
					
						ID in PlantcircBase
						zma_circ_008876
					
						Alias
						zma_circ_0002470
					
						Organism
						
							Zea mays						
					
						Position
						
							chr6: 4704822-4709135  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d035089						
					
						Parent gene annotation
						
							pleckstrin homology (PH) domain-containing protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d035089_circ_g.4 Zm00001d035089_circ_g.5 Zm00001d035089_circ_g.6 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d035089_T007:7
Zm00001d035089_T006:7
Zm00001d035089_T003:7
Zm00001d035089_T005:7

General Information
CircRNA Name	Zm00001d035089_circ_g.3
ID in PlantcircBase	zma_circ_008876
Alias	zma_circ_0002470
Organism	Zea mays
Position	chr6: 4704822-4709135 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	find_circ
Parent gene	Zm00001d035089
Parent gene annotation	pleckstrin homology (PH) domain-containing protein
Parent gene strand	-
Alternative splicing	Zm00001d035089_circ_g.4 Zm00001d035089_circ_g.5 Zm00001d035089_circ_g.6
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d035089_T007:7 Zm00001d035089_T006:7 Zm00001d035089_T003:7 Zm00001d035089_T005:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TACAGTGTGAACAGAAAAAGAAAGGGGAGATGAGGGCATACTTCAGTTTGGAGACAAGTCTTGT
TCCCAAATTATTGAACCGATTTAGAGAAGAAAGTACccttccatcgcttagcagaagagaccct
ttcctcaatcctgccttgaatgccacagaataaaaagaggatgcagatgatgcagcaggaaatt
tgagttcc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CCTTCCATCGCTTAGCAGAAGAGACCCTTTCCTCAATCCTGCCTTGAATGCCACAGAATAAAAA
GAGGATGCAGATGATGCAGCAGGAAATTTGAGTTCCATGTTATGCCAGAAGTTAAATATCTGGT
GTGAAAAACTAACATCCATGTATTCAGCTTGTAGATCAACAGAAAGATGTTCCAAATTCCTTTC
TGATTGACGAACATAACCAGAAGATTTAACCTTAGATATATGCACAAATGGAACAGAGGTACCC
TTATTCTCTTGAATCATTTCCAGCAATACCTTCAATCTCTCTAAATCACATCTAAAATTTATGC
AGCTATCACCTGACATCACCACAAAATGTTTAGTATCAAAAGTTAAGGTGACAAACTTGCAACC
TTTTGGTTCACAATATTGAATATCATCTGTCTCATGAGTGCCCACTTCCATTGGAAAAGAAGCA
GGAGTCACACCCATGTGATTGCTTGTGTGATTTTCTTCTTTCCCCCAGATAGGTATATGGAGTA
CACCAGAAATAGTTTCACATGTTACCACTAAGTTGAAGTCATCTGGTGAACCAAATTCTGATGC
AATAAGTGGTGACGATACCATTTCTGGAAACTGAGACAAAGCAGCTGCATGCTCCACAGGCATA
CTGTTTACTTCTGTCTTTATGTATGAATGGGAATGATTGATAATTGTATTCCAATCCTGTAAAT
ATAACCAGATCTCAAAAAGGGGTACACTTAGTAATATCTCATCTTGTCCAGTATGGTGCTTTGT
AAACTTGAAAAAAACAGGAGATAGTGGCCCATCCGAAACAATGGAGATGAGTGTGTAACCACCA
GGTGACTGCAGTGTTAAAGAAACAACGTCAAAGTCTATGCGCTCTGGTTTTTCACCAACTAGTA
CAGCAGAAACATCAAACTCCATGTTTGCAGTGGCAATCCTCTCCAGTGCCAGACCTTTAGCTTT
AGACTGGCCCAAGAGAATCATCAGATCCTTGATCGAAATAGTGAGATTGGTACACTCATTAGGA
TCAGGGTTGCCCTCACAGAAACTTCTATGATCTAAAAACTGTGAGGCATTGCCTTTGTACATTT
TACTTTCATTGCCGATCGAAATCAACTGGTCAACAACACCAATAACTGTCTCCATCCCATTTAT
AAAATATAAATCTGCATAAGATTTGACAAAGTTAAAGCTAATATTACAAAAATACATATGAAGA
AGTTGAAAAACAAGTTCAATAATGATCTGGTACCTTCAGCAATCAAGTTGCATCGTGATATTTT
GCTCATAACGGAGGTAGGTGAAGTAGGCTGCTGCGAGTATGGTATATCTTTGCAAGGAACCTGA
ATCCATACGTCGGCATCAAGCTTTTCAATAAGAGAATGGATTCTCTTAGGAACGTTCTCATCAA
GCTTTAGCATAAAATCTGTTTGGTCGCTTACAATTAGAAGTGATATGGATGCATTTCTTGCATA
TATGCAGATGACATCAACTCTTCTGGAAACTATGCACTCTGAACTGAAGAATTCTTTGGGGATA
CGCTTTGCAAATTCTACAGAGCTTCCGTTCGCAATGAACTCACAGAAAAAATGTGGAACCTCCA
GCTTTAGACACGATAAACCTTGCTCTTCCACAGGAAAAAATACAACACAATCACTGATATCAAA
TTTATATGTTACACAGTCATGTGATTCTCTCAAGCCTTCAAGGTTGTTATCTGCCACAAGGAAT
TCCTGTTCTGCAATACGATTCCAATCATCCAACAAAAAGAATCCAACAAACATAGCCAGTAACT
TGGATGGTAATACACAACAAACGTTTTGAATTCCAACACATACTTCGGTTGACAGTGCAGGTAA
GTCCTTTTTAACTCGAACGTTGAGTACACTAGCATTGCGATGTGAAGCTGTGCCCCAGACCAGC
TCGTTGACATTTGGTGGAGTCCATGGTGAAGCAAGAGTCAAATTGTTAGCAGACAATAGTAAGT
CCCATGAGCTTGCATCAAAATAAGTGAGTGTTGATATCGATTCAGGAATGGTTATTGTTACTAA
AGTACCACATGATTCAGGAAAATGTATTCTAACAGAAATAAGTGATAGATCCAGAACAGTTCTG
CTGGCATTCTTGGGGTCATTTGATGAGCCAGATGAACAATCTGAACGCTGGGTTTTACCGTATG
TATTGCTGGTGAGATCTGATGCATGATAACCATTCAAACCTGAAGTGTCATGACAGTGCTCATT
CTTTGAGTATAAACTTTCTTGTGCTTCAACATTTTGAGTTCCTAAGCACCCAAAATTATATCCA
CAACTGTGATCTGCAACTAAAAATGGGAAGTGGTCAACAGAAACTCCTGCGAATACAGTGCCAT
CTGCACCACATAAATTTGACAAAAAGAACATGGGAAGTATGCCATTAGCTGCCCCGGATTTCAT
GGAACTCTGACCAATCATTGTGGATTCAACATCACTGCCAATTGAAGGTCCTGAATCAAGTTTT
CTTAAAAACATCCTTATCTGACCAATAACAGATGGGTTAACATGCAGATCAACATCACATAAAA
TCAGCCGGTATACATGATGTATTTGATCGTCATGCTTGTGAGTTCTATAATGCAGATCCAAACA
AGTTTCAACAGAATTTTCAGGACATCGTGTTAAGTTCCCAGATAAGCATAGCACATGTGAATCT
GATTTATCCTTCCAATATCTGAAAGTAACATTGACCGTCTTCATGGCAAGAGAAAGATCTGACA
ATTCACAGATAGCATACCTAGAAATCACAGCAGCAACTCATATAAAAGAACATAAAATAGTCAT
GATTCAATGTTGCAAAATCGGTAACCAATTATTAACCTGATATCAATGTCTTCAATGCCAACAA
TGAGACCAGAACTTTCCTCAAAATTACCATCAAGGTCAACATGTAAACCTAACTTGGCGAGCTT
CAGAGACACAGACACATTCAAGGCCAATTTCTTGGGTACATGTGTCTTGGTATTATCAAATACG
CTGTTCTTGAAAAGGTTAGTTTCTTTCATTCTAGGCAAATTAACAATGGTACTGTACATTGTCT
GAGAGAGGTATGCATCAATAGATGACACAATAAAACCGACCTGCCAAAACAACAGTTCAGAAAT
ACATAAACTTACAATGGCAAGAATAATGTAAGCAGACAAATCACATTGCAAAAACTAGGGTGAA
CAAACTTTAGTATACACTTACGTAGCTATAAACCAAAAATAGATCATTAAAAAAATAATAAATC
ACTGTCCTTCAAAATGTTACCTCCAATTGTTTTAGCACTGGTTCATCTAGGAATACACACAATC
GAAGTGCAATGGAAGCATCAAGCTTAATCAGTGTAGAGGAAACATTATGTCTGTCAGGCAACAA
TACCTTCACCTGCAATCATTCATTTATTATTGATTCATATAGATATTGAATAACCAAAAAACGG
AACAATAAACTATGCACAATGTCTGACCTGAAACCCAGTAAGGCCAAGCTCAAACTGGTTATAA
AGCTCATCCAACTGGATACCGAGTAACAGATCATCAGAAAAATAACTAGGAAGACTTTTTGATA
TGTGATCAAGAAAGGAATTGCTTTCTTGTGTTCGAGAAATATCGTCAATTGTATCTTTAGACTG
AATGAATACATCCCCAGCATCAATAACCTGCAATTACAATAATTGCTCAAGGTAAAAGAAAATA
GCTACTAATCAACCAATTGAAGTTAAATAGAGAGGGTACAATAATTAAAACCTATTAGAATAAT
CTTTTCTTCTGAAAACATTAAGCCAGTGATCATTTAATTTTGTATTTTTTAGGAGCCTGAGATT
TTGAAACAATATTACAGGATATTTCTTGCATAATTTCAAACTTGAAACAAATTAAACAAGGCCA
GTTTATCAGGTTCTGGTCGGGTACAGGGAAAATTGGTGTCCATCCGTTCCAAACACGAATTTGG
GCACTTAATCTGTAGAACTTATGTGCACATAAATATCATGGTATTGATGTCTCCCTTGAACAAA
AAAATGCAAGGCAAAGTATTCAGCATTAGAACATACCATGGCAAGTTCTTTCCTTTCACAATTC
TGTGATGGTATCCTAATGACGAAATGATAAATCCTCAAATCCCAAATAAGTTTTTTACGATTAG
CAGACATGTACCTTGAATTATGTTCAAAATATTATTCAACTTGTACAAGCAAGGTACAGTGTGA
ACAGAAAAAGAAAGGGGAGATGAGGGCATACTTCAGTTTGGAGACAAGTCTTGTTCCCAAATTA
TTGAACCGATTTAGAGAAGAAAGTAC
						
					

			
		

Sequences
Splice junction sequence	TACAGTGTGAACAGAAAAAGAAAGGGGAGATGAGGGCATACTTCAGTTTGGAGACAAGTCTTGT TCCCAAATTATTGAACCGATTTAGAGAAGAAAGTACccttccatcgcttagcagaagagaccct ttcctcaatcctgccttgaatgccacagaataaaaagaggatgcagatgatgcagcaggaaatt tgagttcc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CCTTCCATCGCTTAGCAGAAGAGACCCTTTCCTCAATCCTGCCTTGAATGCCACAGAATAAAAA GAGGATGCAGATGATGCAGCAGGAAATTTGAGTTCCATGTTATGCCAGAAGTTAAATATCTGGT GTGAAAAACTAACATCCATGTATTCAGCTTGTAGATCAACAGAAAGATGTTCCAAATTCCTTTC TGATTGACGAACATAACCAGAAGATTTAACCTTAGATATATGCACAAATGGAACAGAGGTACCC TTATTCTCTTGAATCATTTCCAGCAATACCTTCAATCTCTCTAAATCACATCTAAAATTTATGC AGCTATCACCTGACATCACCACAAAATGTTTAGTATCAAAAGTTAAGGTGACAAACTTGCAACC TTTTGGTTCACAATATTGAATATCATCTGTCTCATGAGTGCCCACTTCCATTGGAAAAGAAGCA GGAGTCACACCCATGTGATTGCTTGTGTGATTTTCTTCTTTCCCCCAGATAGGTATATGGAGTA CACCAGAAATAGTTTCACATGTTACCACTAAGTTGAAGTCATCTGGTGAACCAAATTCTGATGC AATAAGTGGTGACGATACCATTTCTGGAAACTGAGACAAAGCAGCTGCATGCTCCACAGGCATA CTGTTTACTTCTGTCTTTATGTATGAATGGGAATGATTGATAATTGTATTCCAATCCTGTAAAT ATAACCAGATCTCAAAAAGGGGTACACTTAGTAATATCTCATCTTGTCCAGTATGGTGCTTTGT AAACTTGAAAAAAACAGGAGATAGTGGCCCATCCGAAACAATGGAGATGAGTGTGTAACCACCA GGTGACTGCAGTGTTAAAGAAACAACGTCAAAGTCTATGCGCTCTGGTTTTTCACCAACTAGTA CAGCAGAAACATCAAACTCCATGTTTGCAGTGGCAATCCTCTCCAGTGCCAGACCTTTAGCTTT AGACTGGCCCAAGAGAATCATCAGATCCTTGATCGAAATAGTGAGATTGGTACACTCATTAGGA TCAGGGTTGCCCTCACAGAAACTTCTATGATCTAAAAACTGTGAGGCATTGCCTTTGTACATTT TACTTTCATTGCCGATCGAAATCAACTGGTCAACAACACCAATAACTGTCTCCATCCCATTTAT AAAATATAAATCTGCATAAGATTTGACAAAGTTAAAGCTAATATTACAAAAATACATATGAAGA AGTTGAAAAACAAGTTCAATAATGATCTGGTACCTTCAGCAATCAAGTTGCATCGTGATATTTT GCTCATAACGGAGGTAGGTGAAGTAGGCTGCTGCGAGTATGGTATATCTTTGCAAGGAACCTGA ATCCATACGTCGGCATCAAGCTTTTCAATAAGAGAATGGATTCTCTTAGGAACGTTCTCATCAA GCTTTAGCATAAAATCTGTTTGGTCGCTTACAATTAGAAGTGATATGGATGCATTTCTTGCATA TATGCAGATGACATCAACTCTTCTGGAAACTATGCACTCTGAACTGAAGAATTCTTTGGGGATA CGCTTTGCAAATTCTACAGAGCTTCCGTTCGCAATGAACTCACAGAAAAAATGTGGAACCTCCA GCTTTAGACACGATAAACCTTGCTCTTCCACAGGAAAAAATACAACACAATCACTGATATCAAA TTTATATGTTACACAGTCATGTGATTCTCTCAAGCCTTCAAGGTTGTTATCTGCCACAAGGAAT TCCTGTTCTGCAATACGATTCCAATCATCCAACAAAAAGAATCCAACAAACATAGCCAGTAACT TGGATGGTAATACACAACAAACGTTTTGAATTCCAACACATACTTCGGTTGACAGTGCAGGTAA GTCCTTTTTAACTCGAACGTTGAGTACACTAGCATTGCGATGTGAAGCTGTGCCCCAGACCAGC TCGTTGACATTTGGTGGAGTCCATGGTGAAGCAAGAGTCAAATTGTTAGCAGACAATAGTAAGT CCCATGAGCTTGCATCAAAATAAGTGAGTGTTGATATCGATTCAGGAATGGTTATTGTTACTAA AGTACCACATGATTCAGGAAAATGTATTCTAACAGAAATAAGTGATAGATCCAGAACAGTTCTG CTGGCATTCTTGGGGTCATTTGATGAGCCAGATGAACAATCTGAACGCTGGGTTTTACCGTATG TATTGCTGGTGAGATCTGATGCATGATAACCATTCAAACCTGAAGTGTCATGACAGTGCTCATT CTTTGAGTATAAACTTTCTTGTGCTTCAACATTTTGAGTTCCTAAGCACCCAAAATTATATCCA CAACTGTGATCTGCAACTAAAAATGGGAAGTGGTCAACAGAAACTCCTGCGAATACAGTGCCAT CTGCACCACATAAATTTGACAAAAAGAACATGGGAAGTATGCCATTAGCTGCCCCGGATTTCAT GGAACTCTGACCAATCATTGTGGATTCAACATCACTGCCAATTGAAGGTCCTGAATCAAGTTTT CTTAAAAACATCCTTATCTGACCAATAACAGATGGGTTAACATGCAGATCAACATCACATAAAA TCAGCCGGTATACATGATGTATTTGATCGTCATGCTTGTGAGTTCTATAATGCAGATCCAAACA AGTTTCAACAGAATTTTCAGGACATCGTGTTAAGTTCCCAGATAAGCATAGCACATGTGAATCT GATTTATCCTTCCAATATCTGAAAGTAACATTGACCGTCTTCATGGCAAGAGAAAGATCTGACA ATTCACAGATAGCATACCTAGAAATCACAGCAGCAACTCATATAAAAGAACATAAAATAGTCAT GATTCAATGTTGCAAAATCGGTAACCAATTATTAACCTGATATCAATGTCTTCAATGCCAACAA TGAGACCAGAACTTTCCTCAAAATTACCATCAAGGTCAACATGTAAACCTAACTTGGCGAGCTT CAGAGACACAGACACATTCAAGGCCAATTTCTTGGGTACATGTGTCTTGGTATTATCAAATACG CTGTTCTTGAAAAGGTTAGTTTCTTTCATTCTAGGCAAATTAACAATGGTACTGTACATTGTCT GAGAGAGGTATGCATCAATAGATGACACAATAAAACCGACCTGCCAAAACAACAGTTCAGAAAT ACATAAACTTACAATGGCAAGAATAATGTAAGCAGACAAATCACATTGCAAAAACTAGGGTGAA CAAACTTTAGTATACACTTACGTAGCTATAAACCAAAAATAGATCATTAAAAAAATAATAAATC ACTGTCCTTCAAAATGTTACCTCCAATTGTTTTAGCACTGGTTCATCTAGGAATACACACAATC GAAGTGCAATGGAAGCATCAAGCTTAATCAGTGTAGAGGAAACATTATGTCTGTCAGGCAACAA TACCTTCACCTGCAATCATTCATTTATTATTGATTCATATAGATATTGAATAACCAAAAAACGG AACAATAAACTATGCACAATGTCTGACCTGAAACCCAGTAAGGCCAAGCTCAAACTGGTTATAA AGCTCATCCAACTGGATACCGAGTAACAGATCATCAGAAAAATAACTAGGAAGACTTTTTGATA TGTGATCAAGAAAGGAATTGCTTTCTTGTGTTCGAGAAATATCGTCAATTGTATCTTTAGACTG AATGAATACATCCCCAGCATCAATAACCTGCAATTACAATAATTGCTCAAGGTAAAAGAAAATA GCTACTAATCAACCAATTGAAGTTAAATAGAGAGGGTACAATAATTAAAACCTATTAGAATAAT CTTTTCTTCTGAAAACATTAAGCCAGTGATCATTTAATTTTGTATTTTTTAGGAGCCTGAGATT TTGAAACAATATTACAGGATATTTCTTGCATAATTTCAAACTTGAAACAAATTAAACAAGGCCA GTTTATCAGGTTCTGGTCGGGTACAGGGAAAATTGGTGTCCATCCGTTCCAAACACGAATTTGG GCACTTAATCTGTAGAACTTATGTGCACATAAATATCATGGTATTGATGTCTCCCTTGAACAAA AAAATGCAAGGCAAAGTATTCAGCATTAGAACATACCATGGCAAGTTCTTTCCTTTCACAATTC TGTGATGGTATCCTAATGACGAAATGATAAATCCTCAAATCCCAAATAAGTTTTTTACGATTAG CAGACATGTACCTTGAATTATGTTCAAAATATTATTCAACTTGTACAAGCAAGGTACAGTGTGA ACAGAAAAAGAAAGGGGAGATGAGGGCATACTTCAGTTTGGAGACAAGTCTTGTTCCCAAATTA TTGAACCGATTTAGAGAAGAAAGTAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.136596523

Conservation Information
Conserved circRNAs	NA
PMCS	0.136596523

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							4708988-4704879(+)
4708990-4704824(-)
						
					

						Potential amino acid sequence
						
							MYFSLETSLVPKLLNRFREESTLPSLSRRDPFLNPALNATE*(+)
MSANRKKLIWDLRIYHFVIRIPSQNCERKELAMVIDAGDVFIQSKDTIDDISRTQESNSFLDHI
SKSLPSYFSDDLLLGIQLDELYNQFELGLTGFQVKVLLPDRHNVSSTLIKLDASIALRLCVFLD
EPVLKQLEVGFIVSSIDAYLSQTMYSTIVNLPRMKETNLFKNSVFDNTKTHVPKKLALNVSVSL
KLAKLGLHVDLDGNFEESSGLIVGIEDIDIRYAICELSDLSLAMKTVNVTFRYWKDKSDSHVLC
LSGNLTRCPENSVETCLDLHYRTHKHDDQIHHVYRLILCDVDLHVNPSVIGQIRMFLRKLDSGP
SIGSDVESTMIGQSSMKSGAANGILPMFFLSNLCGADGTVFAGVSVDHFPFLVADHSCGYNFGC
LGTQNVEAQESLYSKNEHCHDTSGLNGYHASDLTSNTYGKTQRSDCSSGSSNDPKNASRTVLDL
SLISVRIHFPESCGTLVTITIPESISTLTYFDASSWDLLLSANNLTLASPWTPPNVNELVWGTA
SHRNASVLNVRVKKDLPALSTEVCVGIQNVCCVLPSKLLAMFVGFFLLDDWNRIAEQEFLVADN
NLEGLRESHDCVTYKFDISDCVVFFPVEEQGLSCLKLEVPHFFCEFIANGSSVEFAKRIPKEFF
SSECIVSRRVDVICIYARNASISLLIVSDQTDFMLKLDENVPKRIHSLIEKLDADVWIQVPCKD
IPYSQQPTSPTSVMSKISRCNLIAEDLYFINGMETVIGVVDQLISIGNESKMYKGNASQFLDHR
SFCEGNPDPNECTNLTISIKDLMILLGQSKAKGLALERIATANMEFDVSAVLVGEKPERIDFDV
VSLTLQSPGGYTLISIVSDGPLSPVFFKFTKHHTGQDEILLSVPLFEIWLYLQDWNTIINHSHS
YIKTEVNSMPVEHAAALSQFPEMVSSPLIASEFGSPDDFNLVVTCETISGVLHIPIWGKEENHT
SNHMGVTPASFPMEVGTHETDDIQYCEPKGCKFVTLTFDTKHFVVMSGDSCINFRCDLERLKVL
LEMIQENKGTSVPFVHISKVKSSGYVRQSERNLEHLSVDLQAEYMDVSFSHQIFNFWHNMELKF
PAASSASSFYSVAFKAGLRKGSLLLSDGRVLSSLNRFNNLGTRLVSKLKYMSANRKKLIWDLRI
YHFVIRIPSQNCERKELAMVIDAGDVFIQSKDTIDDISRTQESNSFLDHISKSLPSYFSDDLLL
GIQLDELYNQFELGLTGFQVKVLLPDRHNVSSTLIKLDASIALRLCVFLDEPVLKQLEVGFIVS
SIDAYLSQTMYSTIVNLPRMKETNLFKNSVFDNTKTHVPKKLALNVSVSLKLAKLGLHVDLDGN
FEESSGLIVGIEDIDIRYAICELSDLSLAMKTVNVTFRYWKDKSDSHVLCLSGNLTRCPENSVE
TCLDLHYRTHKHDDQIHHVYRLILCDVDLHVNPSVIGQIRMFLRKLDSGPSIGSDVESTMIGQS
SMKSGAANGILPMFFLSNLCGADGTVFAGVSVDHFPFLVADHSCGYNFGCLGTQNVEAQESLYS
KNEHCHDTSGLNGYHASDLTSNTYGKTQRSDCSSGSSNDPKNASRTVLDLSLISVRIHFPESCG
TLVTITIPESISTLTYFDASSWDLLLSANNLTLASPWTPPNVNELVWGTASHRNASVLNVRVKK
DLPALSTEVCVGIQNVCCVLPSKLLAMFVGFFLLDDWNRIAEQEFLVADNNLEGLRESHDCVTY
KFDISDCVVFFPVEEQGLSCLKLEVPHFFCEFIANGSSVEFAKRIPKEFFSSECIVSRRVDVIC
IYARNASISLLIVSDQTDFMLKLDENVPKRIHSLIEKLDADVWIQVPCKDIPYSQQPTSPTSVM
SKISRCNLIAEDLYFINGMETVIGVVDQLISIGNESKMYKGNASQFLDHRSFCEGNPDPNECTN
LTISIKDLMILLGQSKAKGLALERIATANMEFDVSAVLVGEKPERIDFDVVSLTLQSPGGYTLI
SIVSDGPLSPVFFKFTKHHTGQDEILLSVPLFEIWLYLQDWNTIINHSHSYIKTEVNSMPVEHA
AALSQFPEMVSSPLIASEFGSPDDFNLVVTCETISGVLHIPIWGKEENHTSNHMGVTPASFPME
VGTHETDDIQYCEPKGCKFVTLTFDTKHFVVMSGDSCINFRCDLERLKVLLEMIQENKGTSVPF
VHISKVKSSGYVRQSERNLEHLSVDLQAEYMDVSFSHQIFNFWHNMELKFPAASSASSFYSVAF
KAGLRKGSLLLSDGRVLSSLNRFNNLGTRLVSKLKYMSANRKKLIWDLRIYHFVIRIPSQNCER
KELAMVIDAGDVFIQSKDTIDDISRTQESNSFLDHISKSLPSYFSDDLLLGIQLDELYNQFELG
LTGFQVKVLLPDRHNVSSTLIKLDASIALRLCVFLDEPVLKQLEVGFIVSSIDAYLSQTMYSTI
VNLPRMKETNLFKNSVFDNTKTHVPKKLALNVSVSLKLAKLGLHVDLDGNFEESSGLIVGIEDI
DIRYAICELSDLSLAMKTVNVTFRYWKDKSDSHVLCLSGNLTRCPENSVETCLDLHYRTHKHDD
QIHHVYRLILCDVDLHVNPSVIGQIRMFLRKLDSGPSIGSDVESTMIGQSSMKSGAANGILPMF
FLSNLCGADGTVFAGVSVDHFPFLVADHSCGYNFGCLGTQNVEAQESLYSKNEHCHDTSGLNGY
HASDLTSNTYGKTQRSDCSSGSSNDPKNASRTVLDLSLISVRIHFPESCGTLVTITIPESISTL
TYFDASSWDLLLSANNLTLASPWTPPNVNELVWGTASHRNASVLNVRVKKDLPALSTEVCVGIQ
NVCCVLPSKLLAMFVGFFLLDDWNRIAEQEFLVADNNLEGLRESHDCVTYKFDISDCVVFFPVE
EQGLSCLKLEVPHFFCEFIANGSSVEFAKRIPKEFFSSECIVSRRVDVICIYARNASISLLIVS
DQTDFMLKLDENVPKRIHSLIEKLDADVWIQVPCKDIPYSQQPTSPTSVMSKISRCNLIAEDLY
FINGMETVIGVVDQLISIGNESKMYKGNASQFLDHRSFCEGNPDPNECTNLTISIKDLMILLGQ
SKAKGLALERIATANMEFDVSAVLVGEKPERIDFDVVSLTLQSPGGYTLISIVSDGPLSPVFFK
FTKHHTGQDEILLSVPLFEIWLYLQDWNTIINHSHSYIKTEVNSMPVEHAAALSQFPEMVSSPL
IASEFGSPDDFNLVVTCETISGVLHIPIWGKEENHTSNHMGVTPASFPMEVGTHETDDIQYCEP
KGCKFVTLTFDTKHFVVMSGDSCINFRCDLERLKVLLEMIQENKGTSVPFVHISKVKSSGYVRQ
SERNLEHLSVDLQAEYMDVSFSHQIFNFWHNMELKFPAASSASSFYSVAFKAGLRKGSLLLSDG
RVLSSLNRFNNLGTRLVSKLKYMSANRKKLIWDLRIYHFVIRIPSQNCERKELAMVIDAGDVFI
QSKDTIDDISRTQESNSFLDHISKSLPSYFSDDLLLGIQLDELYNQFELGLTGFQVKVLLPDRH
NVSSTLIKLDASIALRLCVFLDEPVLKQLEVGFIVSSIDAYLSQTMYSTIVNLPRMKETNLFKN
SVFDNTKTHVPKKLALNVSVSLKLAKLGLHVDLDGNFEESSGLIVGIEDIDIRYAICELSDLSL
AMKTVNVTFRYWKDKSDSHVLCLSGNLTRCPENSVETCLDLHYRTHKHDDQIHHVYRLILCDVD
LHVNPSVIGQIRMFLRKLDSGPSIGSDVESTMIGQSSMKSGAANGILPMFFLSNLCGADGTVFA
GVSVDHFPFLVADHSCGYNFGCLGTQNVEAQESLYSKNEHCHDTSGLNGYHASDLTSNTYGKTQ
RSDCSSGSSNDPKNASRTVLDLSLISVRIHFPESCGTLVTITIPESISTLTYFDASSWDLLLSA
NNLTLASPWTPPNVNELVWGTASHRNASVLNVRVKKDLPALSTEVCVGIQNVCCVLPSKLLAMF
VGFFLLDDWNRIAEQEFLVADNNLEGLRESHDCVTYKFDISDCVVFFPVEEQGLSCLKLEVPHF
FCEFIANGSSVEFAKRIPKEFFSSECIVSRRVDVICIYARNASISLLIVSDQTDFMLKLDENVP
KRIHSLIEKLDADVWIQVPCKDIPYSQQPTSPTSVMSKISRCNLIAEDLYFINGMETVIGVVDQ
LISIGNESKMYKGNASQFLDHRSFCEGNPDPNECTNLTISIKDLMILLGQSKAKGLALERIATA
NMEFDVSAVLVGEKPERIDFDVVSLTLQSPGGYTLISIVSDGPLSPVFFKFTKHHTGQDEILLS
VPLFEIWLYLQDWNTIINHSHSYIKTEVNSMPVEHAAALSQFPEMVSSPLIASEFGSPDDFNLV
VTCETISGVLHIPIWGKEENHTSNHMGVTPASFPMEVGTHETDDIQYCEPKGCKFVTLTFDTKH
FVVMSGDSCINFRCDLERLKVLLEMIQENKGTSVPFVHISKVKSSGYVRQSERNLEHLSVDLQA
EYMDVSFSHQIFNFWHNMELKFPAASSASSFYSVAFKAGLRKGSLLLSDGR(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	4708988-4704879(+) 4708990-4704824(-)
Potential amino acid sequence	MYFSLETSLVPKLLNRFREESTLPSLSRRDPFLNPALNATE*(+) MSANRKKLIWDLRIYHFVIRIPSQNCERKELAMVIDAGDVFIQSKDTIDDISRTQESNSFLDHI SKSLPSYFSDDLLLGIQLDELYNQFELGLTGFQVKVLLPDRHNVSSTLIKLDASIALRLCVFLD EPVLKQLEVGFIVSSIDAYLSQTMYSTIVNLPRMKETNLFKNSVFDNTKTHVPKKLALNVSVSL KLAKLGLHVDLDGNFEESSGLIVGIEDIDIRYAICELSDLSLAMKTVNVTFRYWKDKSDSHVLC LSGNLTRCPENSVETCLDLHYRTHKHDDQIHHVYRLILCDVDLHVNPSVIGQIRMFLRKLDSGP SIGSDVESTMIGQSSMKSGAANGILPMFFLSNLCGADGTVFAGVSVDHFPFLVADHSCGYNFGC LGTQNVEAQESLYSKNEHCHDTSGLNGYHASDLTSNTYGKTQRSDCSSGSSNDPKNASRTVLDL SLISVRIHFPESCGTLVTITIPESISTLTYFDASSWDLLLSANNLTLASPWTPPNVNELVWGTA SHRNASVLNVRVKKDLPALSTEVCVGIQNVCCVLPSKLLAMFVGFFLLDDWNRIAEQEFLVADN NLEGLRESHDCVTYKFDISDCVVFFPVEEQGLSCLKLEVPHFFCEFIANGSSVEFAKRIPKEFF SSECIVSRRVDVICIYARNASISLLIVSDQTDFMLKLDENVPKRIHSLIEKLDADVWIQVPCKD IPYSQQPTSPTSVMSKISRCNLIAEDLYFINGMETVIGVVDQLISIGNESKMYKGNASQFLDHR SFCEGNPDPNECTNLTISIKDLMILLGQSKAKGLALERIATANMEFDVSAVLVGEKPERIDFDV VSLTLQSPGGYTLISIVSDGPLSPVFFKFTKHHTGQDEILLSVPLFEIWLYLQDWNTIINHSHS YIKTEVNSMPVEHAAALSQFPEMVSSPLIASEFGSPDDFNLVVTCETISGVLHIPIWGKEENHT SNHMGVTPASFPMEVGTHETDDIQYCEPKGCKFVTLTFDTKHFVVMSGDSCINFRCDLERLKVL LEMIQENKGTSVPFVHISKVKSSGYVRQSERNLEHLSVDLQAEYMDVSFSHQIFNFWHNMELKF PAASSASSFYSVAFKAGLRKGSLLLSDGRVLSSLNRFNNLGTRLVSKLKYMSANRKKLIWDLRI YHFVIRIPSQNCERKELAMVIDAGDVFIQSKDTIDDISRTQESNSFLDHISKSLPSYFSDDLLL GIQLDELYNQFELGLTGFQVKVLLPDRHNVSSTLIKLDASIALRLCVFLDEPVLKQLEVGFIVS SIDAYLSQTMYSTIVNLPRMKETNLFKNSVFDNTKTHVPKKLALNVSVSLKLAKLGLHVDLDGN FEESSGLIVGIEDIDIRYAICELSDLSLAMKTVNVTFRYWKDKSDSHVLCLSGNLTRCPENSVE TCLDLHYRTHKHDDQIHHVYRLILCDVDLHVNPSVIGQIRMFLRKLDSGPSIGSDVESTMIGQS SMKSGAANGILPMFFLSNLCGADGTVFAGVSVDHFPFLVADHSCGYNFGCLGTQNVEAQESLYS KNEHCHDTSGLNGYHASDLTSNTYGKTQRSDCSSGSSNDPKNASRTVLDLSLISVRIHFPESCG TLVTITIPESISTLTYFDASSWDLLLSANNLTLASPWTPPNVNELVWGTASHRNASVLNVRVKK DLPALSTEVCVGIQNVCCVLPSKLLAMFVGFFLLDDWNRIAEQEFLVADNNLEGLRESHDCVTY KFDISDCVVFFPVEEQGLSCLKLEVPHFFCEFIANGSSVEFAKRIPKEFFSSECIVSRRVDVIC IYARNASISLLIVSDQTDFMLKLDENVPKRIHSLIEKLDADVWIQVPCKDIPYSQQPTSPTSVM SKISRCNLIAEDLYFINGMETVIGVVDQLISIGNESKMYKGNASQFLDHRSFCEGNPDPNECTN LTISIKDLMILLGQSKAKGLALERIATANMEFDVSAVLVGEKPERIDFDVVSLTLQSPGGYTLI SIVSDGPLSPVFFKFTKHHTGQDEILLSVPLFEIWLYLQDWNTIINHSHSYIKTEVNSMPVEHA AALSQFPEMVSSPLIASEFGSPDDFNLVVTCETISGVLHIPIWGKEENHTSNHMGVTPASFPME VGTHETDDIQYCEPKGCKFVTLTFDTKHFVVMSGDSCINFRCDLERLKVLLEMIQENKGTSVPF VHISKVKSSGYVRQSERNLEHLSVDLQAEYMDVSFSHQIFNFWHNMELKFPAASSASSFYSVAF KAGLRKGSLLLSDGRVLSSLNRFNNLGTRLVSKLKYMSANRKKLIWDLRIYHFVIRIPSQNCER KELAMVIDAGDVFIQSKDTIDDISRTQESNSFLDHISKSLPSYFSDDLLLGIQLDELYNQFELG LTGFQVKVLLPDRHNVSSTLIKLDASIALRLCVFLDEPVLKQLEVGFIVSSIDAYLSQTMYSTI VNLPRMKETNLFKNSVFDNTKTHVPKKLALNVSVSLKLAKLGLHVDLDGNFEESSGLIVGIEDI DIRYAICELSDLSLAMKTVNVTFRYWKDKSDSHVLCLSGNLTRCPENSVETCLDLHYRTHKHDD QIHHVYRLILCDVDLHVNPSVIGQIRMFLRKLDSGPSIGSDVESTMIGQSSMKSGAANGILPMF FLSNLCGADGTVFAGVSVDHFPFLVADHSCGYNFGCLGTQNVEAQESLYSKNEHCHDTSGLNGY HASDLTSNTYGKTQRSDCSSGSSNDPKNASRTVLDLSLISVRIHFPESCGTLVTITIPESISTL TYFDASSWDLLLSANNLTLASPWTPPNVNELVWGTASHRNASVLNVRVKKDLPALSTEVCVGIQ NVCCVLPSKLLAMFVGFFLLDDWNRIAEQEFLVADNNLEGLRESHDCVTYKFDISDCVVFFPVE EQGLSCLKLEVPHFFCEFIANGSSVEFAKRIPKEFFSSECIVSRRVDVICIYARNASISLLIVS DQTDFMLKLDENVPKRIHSLIEKLDADVWIQVPCKDIPYSQQPTSPTSVMSKISRCNLIAEDLY FINGMETVIGVVDQLISIGNESKMYKGNASQFLDHRSFCEGNPDPNECTNLTISIKDLMILLGQ SKAKGLALERIATANMEFDVSAVLVGEKPERIDFDVVSLTLQSPGGYTLISIVSDGPLSPVFFK FTKHHTGQDEILLSVPLFEIWLYLQDWNTIINHSHSYIKTEVNSMPVEHAAALSQFPEMVSSPL IASEFGSPDDFNLVVTCETISGVLHIPIWGKEENHTSNHMGVTPASFPMEVGTHETDDIQYCEP KGCKFVTLTFDTKHFVVMSGDSCINFRCDLERLKVLLEMIQENKGTSVPFVHISKVKSSGYVRQ SERNLEHLSVDLQAEYMDVSFSHQIFNFWHNMELKFPAASSASSFYSVAFKAGLRKGSLLLSDG RVLSSLNRFNNLGTRLVSKLKYMSANRKKLIWDLRIYHFVIRIPSQNCERKELAMVIDAGDVFI QSKDTIDDISRTQESNSFLDHISKSLPSYFSDDLLLGIQLDELYNQFELGLTGFQVKVLLPDRH NVSSTLIKLDASIALRLCVFLDEPVLKQLEVGFIVSSIDAYLSQTMYSTIVNLPRMKETNLFKN SVFDNTKTHVPKKLALNVSVSLKLAKLGLHVDLDGNFEESSGLIVGIEDIDIRYAICELSDLSL AMKTVNVTFRYWKDKSDSHVLCLSGNLTRCPENSVETCLDLHYRTHKHDDQIHHVYRLILCDVD LHVNPSVIGQIRMFLRKLDSGPSIGSDVESTMIGQSSMKSGAANGILPMFFLSNLCGADGTVFA GVSVDHFPFLVADHSCGYNFGCLGTQNVEAQESLYSKNEHCHDTSGLNGYHASDLTSNTYGKTQ RSDCSSGSSNDPKNASRTVLDLSLISVRIHFPESCGTLVTITIPESISTLTYFDASSWDLLLSA NNLTLASPWTPPNVNELVWGTASHRNASVLNVRVKKDLPALSTEVCVGIQNVCCVLPSKLLAMF VGFFLLDDWNRIAEQEFLVADNNLEGLRESHDCVTYKFDISDCVVFFPVEEQGLSCLKLEVPHF FCEFIANGSSVEFAKRIPKEFFSSECIVSRRVDVICIYARNASISLLIVSDQTDFMLKLDENVP KRIHSLIEKLDADVWIQVPCKDIPYSQQPTSPTSVMSKISRCNLIAEDLYFINGMETVIGVVDQ LISIGNESKMYKGNASQFLDHRSFCEGNPDPNECTNLTISIKDLMILLGQSKAKGLALERIATA NMEFDVSAVLVGEKPERIDFDVVSLTLQSPGGYTLISIVSDGPLSPVFFKFTKHHTGQDEILLS VPLFEIWLYLQDWNTIINHSHSYIKTEVNSMPVEHAAALSQFPEMVSSPLIASEFGSPDDFNLV VTCETISGVLHIPIWGKEENHTSNHMGVTPASFPMEVGTHETDDIQYCEPKGCKFVTLTFDTKH FVVMSGDSCINFRCDLERLKVLLEMIQENKGTSVPFVHISKVKSSGYVRQSERNLEHLSVDLQA EYMDVSFSHQIFNFWHNMELKFPAASSASSFYSVAFKAGLRKGSLLLSDGR(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d035089_circ_g.3

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