Plant Circular RNA Database

Detail information of Os03g0358975_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os03g0358975_circ_g.1
					
						ID in PlantcircBase
						osa_circ_019907
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 13928740-13933371  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os03g0358975						
					
						Parent gene annotation
						
							Hypothetical protein. (Os03t0358975-00)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os03g0359000_circ_g.1 Os03g0359000_circ_g.2 Os03g0358975_circ_g.3 Os03g0358975_circ_g.4 Os03g0358975_circ_g.5 Os03g0359000_circ_g.6 Os03g0358975_circ_g.7 Os03g0358975_circ_g.8 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0358975-00:8

General Information
CircRNA Name	Os03g0358975_circ_g.1
ID in PlantcircBase	osa_circ_019907
Alias	NA
Organism	Oryza sativa
Position	chr3: 13928740-13933371 JBrowse»
Reference genome	IRGSP-1.0.38
Type	u-circRNA
Identification method	CIRCexplorer
Parent gene	Os03g0358975
Parent gene annotation	Hypothetical protein. (Os03t0358975-00)
Parent gene strand	+
Alternative splicing	Os03g0359000_circ_g.1 Os03g0359000_circ_g.2 Os03g0358975_circ_g.3 Os03g0358975_circ_g.4 Os03g0358975_circ_g.5 Os03g0359000_circ_g.6 Os03g0358975_circ_g.7 Os03g0358975_circ_g.8
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0358975-00:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCCTTCAGAGAGTCCAGACCCTGAAAAGTCCAGTGTAAAGACTGTAATATTTGATGGTAGAAGA
ATAATTGCGGCTTCACTAGCATCGGCTCTGCATCCAtctatcctcatcttcctcagtgtagggc
atatctgatagactatcaaatgagtactccacatactcgccatcatcagaggttggagtcagga
gccttcca

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1029
Transcript exons: 13928740-13928898,13930138-13930260,13930416-13930619,13
930703-13930811,13931601-13931664,13932300-13932447,1393
2749-13932843,13933245-13933371
TCTATCCTCATCTTCCTCAGTGTAGGGCATATCTGATAGACTATCAAATGAGTACTCCACATAC
TCGCCATCATCAGAGGTTGGAGTCAGGAGCCTTCCATTGCGGCCATTAGGAGGAGTTGCAGTAG
ATACACTAGAAGAGGAAGGACCATTATCACTATACAATAGAATTTTAGCATTGTTCAGAATGAT
AACAAAATGAAAATACCCACCTCCATTCTACTCATGAGCCTTCTAGAACGTAACTGCGCAATGG
CATCTTCTGTGGTAGCTGTGCGGGCTGTAAGATATGTTGAACATATTGCAATCACTCTAAGAAA
TGTCAATTTGTAGTACCTGACCAAGGCTTCCATGAGGTGTCAGGAAATAATGGTCATCAGGAAC
ATCAGGAGGGTTTAGCACATTATGGAAAAATATTGTTATGGAATCAAAGTAAAATTGTGGACGG
GGTGAATTGTGATCCCCATCGAATTTAATAATGTTTTTGTGGAAACTTACAACATAGGATTCAT
AGATTTTGTCTGAATGATGGGGCAGTATAAAATCATCTTCAGTCGCATGTCCAAACAAAGCAGG
AACAAAGCACCGCTTTGCTACCTGAATGGTATCAAGTTCCATGATGTCAAAGCTGGCTTTTCTC
TTGACAACCTTTCGCATATTTCATTTCATCAAATGATGCTTACCGTGAATTTTGGTAGTGGATA
TTTATATGTATCCACTAGTTCCATCATCAAGTCAACCAGGTTAGAAAATGGACTGTCAAGAACC
ATTCCAGCAATTGATGGATCCTCTGCTCCATACATCAGACTTGTTACTGCACCCATTGAGCGGC
CCCACAGACCAATACAAGATATGTTCCCATCTGTCCGCAAATGATTGACAACAGCTTTCAGATC
TTCTCTTTCATTCCAGCCTAATGTAACATGTTCTCCTTCAGAGAGTCCAGACCCTGAAAAGTCC
AGTGTAAAGACTGTAATATTTGATGGTAGAAGAATAATTGCGGCTTCACTAGCATCGGCTCTGC
ATCCA
						
					

						Genomic sequence
						
							TCTATCCTCATCTTCCTCAGTGTAGGGCATATCTGATAGACTATCAAATGAGTACTCCACATAC
TCGCCATCATCAGAGGTTGGAGTCAGGAGCCTTCCATTGCGGCCATTAGGAGGAGTTGCAGTAG
ATACACTAGAAGAGGAAGGACCATTATCACTGTCCATTACCTGTACAAACAGAATCGAATAGCA
ATCTCAATGCCAGTGGTGATACTCTGAGCATTATATTCTGAAAGCTCAAAAGATTTGTATCATC
CACATATATACTGAAAGAAAACTGATGTGTCATAATGATGATACTACAGCCACAATCCCAACAC
CGTCAAGGATGATTGTGCTCTTATTTGAACAAGATGTATTTGGTATATCCATTCTACTCAGATC
CAATTGGCACTACAACTCAGTATTGATTACAGCTTCAGTTGGAAAAAGTGAATAATCTTATATG
GTAGTTTCTATTTCAGATCGAGTTATCGACATATCTATTACTAGTATGAGATTCAATTTTCATA
GTGCAAAATTATTTCATTTGAATTATATCGATTTCAGTGCCAGTCAACAAAGAATATATTATTT
TATTATGGTTAAGTTGCGTGATTTATTAGGAACAACTCCCACTGATATATTAGGAACTTGGCAT
ATGAACATATTTGTGTAATACTCTGCTACCAAACAGAGTCCTAATCAGTAGAATGCACGAATAA
CTAGGGCCCTAACCCCTTCTATTACTTCTATGCATCATTCTTTTCAGTAAACATCACCTAAGCC
CCATTATTCTCTTCCAAACCCACCATTCTCACTTGACACTGGTAGCAGTAGCAGTAGCCCCTAT
GGAGTCTGGACCTTACCACTGCCACCTCCTCTTGCTCTGAAACAACCACCTATCTCACATTTTT
TTCCCGTAAAATATATTAATTTAACTATCCCGAAAATGCAGGTGTCGAATCATTCTACACGTTA
AACCAGATGATTCTTGGGAAATCATTATGAGCTAGCATTGCACTTCTAGGTGAAAAGCATCTCA
TTTGTTTCTTTTTTCTAGAAAGAACAGTGACCATGTGAAATTCTGGTAGTGGATGATCAGGTAG
AAGATTTTAAAGAAACGGATGACTTGAATATGATTCTAAAGTATTGAAAAATAGCAAAAAAGAA
TATACCTCATTTCTGTCAGCCCTGTCTTCTGCAGTGGCACCAGTTGGGACCTGGAGAACAATCA
AAAGAAACCATGAGTTACTTTTGCTGCTCCACCTCCACAAAGGAGACATCACTGCTGCCTCAGA
TATGAAAACTTATTTAGTAATATTTTGATCACCAATATAATAATTCTAGTGATTGACTTTCCAT
GTGCAGTACAGACAGAAATGACTATCGGTTACTTCCAAGACCACTGGCACAAAGATACAATAGA
ATTTTAGCATTGTTCAGAATGATAACAAAATGAAAATACCCACCTCCATTCTACTCATGAGCCT
TCTAGAACGTAACTGCGCAATGGCATCTTCTGTGGTAGCTGTGCGGGCTGTCCCATAACAAATA
GCACATAAGTTCATACTGTTATTGATGCACCAAACATAACTGCAGATCGAGGTTTGCAAAATCA
TACCTGTTGGTGATTGAGCGAACCTATACTCTATGTCATGTTCTGTATCCCAATGACCCTGTCA
GCAGGACCTAAGGTAAGATATGTTGAACATATTGCAATCACTCTAAGAAATGTCAATTTGTAGT
ACCTGACCAAGGCTTCCATGAGGTGTCAGGAAATAATGGTCATCAGGAACATCAGGAGGGTTTA
GCACATTATGGAAAAATATTGTTATGGAATCAAAGTAAAATTGTGGACGGGGTGAATTGTGATC
CCCATCGAATTTAATAATGTTTTTGTCTCCCTGCAGATGCATTTAAATCAACCATATATTACTA
CCTTATCAGACAAAGGAATCATTTGTCCACATTGAAGGGTAAGGTGGAAACTTACAACATAGGA
TTCATAGATTTTGTCTGAATGATGGGGCAGTATAAAATCATCTTCAGTCGCATGTCCAAACAAA
GCAGGAACAAAGCACCGCTTTGCTACCTGAAAAATTAAATTTCAGATATTAATTGTGTACTGAT
GTATGGTCACAACTGTCACAAATAAATGGAGCGGAGGTGTTTTACAGCATTATCTGATTATCTC
AACTATATAAATCAACATATAGTAGTGGTGGAGGCAGTATGCCATCCCACTACCACCACTTGAA
TATCAGTATCTTCTGTGGATAGATATAAGACTCTATTTGTATGGTGATGTTTTGGTGCAAACTG
TACATGTTCTTTTCTAGAGAAATATATATCTCCATTTAAGTTTAGAAATTGTCACATATTTGTT
TGGAATAGATTGCAACACACAAGTATTTGGCTATTCAAATAAAATTGCAGTGTCATTCACAGTT
GGGAGAAGAAAATGCATGCACATCCTATGAAAAGGTTTGCCTTCCTTTGTTTCTTATTCAGCCT
TCTGCTCTTGTTTACTCAAGGGCACAAGGGGGGAATGAAGAAAGAATTGTATATGAAAGCCAAC
CTAGCAATCTAGGGCTGGGCATCAAAATTGAAAAAGAACAGAGATGCTATAGCAAAAGCTCCTA
AAATTCAATAAGACATGCAAAATAACCAAAAATAAGAATGCAAACACAAAATAGAGATTAGAAA
AAGGGTAATACCAAAAGCAAACTGAATCAAAATCAAATAAAGAGGTCAAAGATTATGATAAATG
AAATCTTCCCCCATGGATACAATGCGTGTAATCTAGACAAGGAGGGGCAAATCACTACACCAGC
CAAAACATTGGAGCAACACAATATTTAGTATATGGACGGTAGCAAACCTGAATGGTATCAAGTT
CCATGATGTCAAAGCTGGCTTTTCTCTTGACAACCTTTCGCATATGTTGTATTGCTAGTTTCAC
CTAAGAAACAAACAAAAGTTCCACAATAAATAAGATACAAATATGGGGCCTACCCTTATGACAC
TGTCATAAAGACTAAGCATATCTATCATCAAATAAAATTAGTACAGTTAACAAATTAAATATAA
CTGGAAACACCAAAAAACAGATGTCACAATCTTCTGAGAAATGCACAGATGGCTGGAAACAGTT
TATGCACCATTGGAACAAATTGTAGTTGCTAACTTGATAGTTGCCATGGGTGTCCCCAATAAGG
TCAATCATCCAATGGCAAGACTAGGTTGCTTTCTACACAAGTTCAGTTTGTTTCCAAGTTTGTC
AGCTAAGAGATTATAAGAACGGATTTATTAATTCAATGAAAGCCTGATTAGTTGTTTGTTTAGT
TTTATTTGTCAGAGAAACGATTAGATATGGATTATCAGCCAAGGATGACATCTATATAAGCTAG
CTTATGCGGTACAATGCAGTATGATTGCAAGCATCATGCAGTCACGGTAGCAGGTGCCACAAGG
GAGTAATGTTTAGAGCAACTGTTAATAACAGCACAGTAAAGTTAAAGCACATATCAACTATAAT
AGTTACTGGACCAACAATTTCATCACCGAAAAGCAAAAAGTTCATTTCATCAAATGATGCTTAC
CGTGAATTTTGGTAGTGGATATTTATATGTATCCACTAGTTCCATCATCAAGTCAACCAGGTTA
GAAAATGGACTGTCAAGAACCATTCCAGCAATTGATGGATCCTCTGCTCCATACATCAGACTGA
AAAATAAAGATAGCAGATTTCATAAACACTAAAAGGCTAAAATTATATAGAATGATGATGTGTA
TTATGTACAATAGGACAACGACTGTAAATGTGAGGAGATTTGTGTGGGACTGTGGGTGTTTTTT
GGGGGCGGCAGGTGCTACATACTTAAGGATAATATTTCACATACTAAAGGATGATAATCGGCAT
CACTCTTTTCCAATTAGCAGCTCAAGTATTGGGATAGCAGGTGTCCTAAAAGAATACTAAAGAT
GAATGCCATCCTAACATAATTTACTCATTTAAAGAAGATACCTTGTTACTGCACCCATTGAGCG
GCCCCACAGACCAATACAAGATATGTTCCCATCTGTCCGCAAATGATTGACAACAGCTTTCAGA
TCTTCTCTCTGTAAAGAAAAACAGATATCATCTACCATTATGCTCTTCGAATAGTGTAAAAGAA
TTGCATTAGCCTAAAAAAATCTATGCTTGGTGCCTTGCTGGCAATGTGCTGTTACTGAGACAAG
CTGATGCAGAATTGAAGAAGAAGCATGTCAATATGATTTCTGTAGAAAGGTTTATATTTCAGTC
TCTACTCTCTAGCCCTCCATTTAATAGCTGTTATAATCATTTTCCAGGTTATTTCTTTCTGAAC
GACAACATGAAGAAATATGAAGTATTCAACTAGCTTTGAATGCACAAAGTTTACAAGCAAACAG
AAGGTTTTAAAAAAGAACAAGTACAAACAGAAGGTTTTAAAAAAGAACAAGTATCATATTTATC
TTCTATAAGTACAAGAATGACTCACTTCATTCCAGCCTAATGTAACATGTTCTCCTTCAGAGAG
TCCAGACCCTGAAAAGTCCAGTGTAAAGACTGTAATATTTGATGGTAGAAGAATAATTGCGGCT
TCACTAGCATCGGCTCTGCATCCA
						
					

			
		

Sequences
Splice junction sequence	TCCTTCAGAGAGTCCAGACCCTGAAAAGTCCAGTGTAAAGACTGTAATATTTGATGGTAGAAGA ATAATTGCGGCTTCACTAGCATCGGCTCTGCATCCAtctatcctcatcttcctcagtgtagggc atatctgatagactatcaaatgagtactccacatactcgccatcatcagaggttggagtcagga gccttcca
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1029 Transcript exons: 13928740-13928898,13930138-13930260,13930416-13930619,13 930703-13930811,13931601-13931664,13932300-13932447,1393 2749-13932843,13933245-13933371 TCTATCCTCATCTTCCTCAGTGTAGGGCATATCTGATAGACTATCAAATGAGTACTCCACATAC TCGCCATCATCAGAGGTTGGAGTCAGGAGCCTTCCATTGCGGCCATTAGGAGGAGTTGCAGTAG ATACACTAGAAGAGGAAGGACCATTATCACTATACAATAGAATTTTAGCATTGTTCAGAATGAT AACAAAATGAAAATACCCACCTCCATTCTACTCATGAGCCTTCTAGAACGTAACTGCGCAATGG CATCTTCTGTGGTAGCTGTGCGGGCTGTAAGATATGTTGAACATATTGCAATCACTCTAAGAAA TGTCAATTTGTAGTACCTGACCAAGGCTTCCATGAGGTGTCAGGAAATAATGGTCATCAGGAAC ATCAGGAGGGTTTAGCACATTATGGAAAAATATTGTTATGGAATCAAAGTAAAATTGTGGACGG GGTGAATTGTGATCCCCATCGAATTTAATAATGTTTTTGTGGAAACTTACAACATAGGATTCAT AGATTTTGTCTGAATGATGGGGCAGTATAAAATCATCTTCAGTCGCATGTCCAAACAAAGCAGG AACAAAGCACCGCTTTGCTACCTGAATGGTATCAAGTTCCATGATGTCAAAGCTGGCTTTTCTC TTGACAACCTTTCGCATATTTCATTTCATCAAATGATGCTTACCGTGAATTTTGGTAGTGGATA TTTATATGTATCCACTAGTTCCATCATCAAGTCAACCAGGTTAGAAAATGGACTGTCAAGAACC ATTCCAGCAATTGATGGATCCTCTGCTCCATACATCAGACTTGTTACTGCACCCATTGAGCGGC CCCACAGACCAATACAAGATATGTTCCCATCTGTCCGCAAATGATTGACAACAGCTTTCAGATC TTCTCTTTCATTCCAGCCTAATGTAACATGTTCTCCTTCAGAGAGTCCAGACCCTGAAAAGTCC AGTGTAAAGACTGTAATATTTGATGGTAGAAGAATAATTGCGGCTTCACTAGCATCGGCTCTGC ATCCA
Genomic sequence	TCTATCCTCATCTTCCTCAGTGTAGGGCATATCTGATAGACTATCAAATGAGTACTCCACATAC TCGCCATCATCAGAGGTTGGAGTCAGGAGCCTTCCATTGCGGCCATTAGGAGGAGTTGCAGTAG ATACACTAGAAGAGGAAGGACCATTATCACTGTCCATTACCTGTACAAACAGAATCGAATAGCA ATCTCAATGCCAGTGGTGATACTCTGAGCATTATATTCTGAAAGCTCAAAAGATTTGTATCATC CACATATATACTGAAAGAAAACTGATGTGTCATAATGATGATACTACAGCCACAATCCCAACAC CGTCAAGGATGATTGTGCTCTTATTTGAACAAGATGTATTTGGTATATCCATTCTACTCAGATC CAATTGGCACTACAACTCAGTATTGATTACAGCTTCAGTTGGAAAAAGTGAATAATCTTATATG GTAGTTTCTATTTCAGATCGAGTTATCGACATATCTATTACTAGTATGAGATTCAATTTTCATA GTGCAAAATTATTTCATTTGAATTATATCGATTTCAGTGCCAGTCAACAAAGAATATATTATTT TATTATGGTTAAGTTGCGTGATTTATTAGGAACAACTCCCACTGATATATTAGGAACTTGGCAT ATGAACATATTTGTGTAATACTCTGCTACCAAACAGAGTCCTAATCAGTAGAATGCACGAATAA CTAGGGCCCTAACCCCTTCTATTACTTCTATGCATCATTCTTTTCAGTAAACATCACCTAAGCC CCATTATTCTCTTCCAAACCCACCATTCTCACTTGACACTGGTAGCAGTAGCAGTAGCCCCTAT GGAGTCTGGACCTTACCACTGCCACCTCCTCTTGCTCTGAAACAACCACCTATCTCACATTTTT TTCCCGTAAAATATATTAATTTAACTATCCCGAAAATGCAGGTGTCGAATCATTCTACACGTTA AACCAGATGATTCTTGGGAAATCATTATGAGCTAGCATTGCACTTCTAGGTGAAAAGCATCTCA TTTGTTTCTTTTTTCTAGAAAGAACAGTGACCATGTGAAATTCTGGTAGTGGATGATCAGGTAG AAGATTTTAAAGAAACGGATGACTTGAATATGATTCTAAAGTATTGAAAAATAGCAAAAAAGAA TATACCTCATTTCTGTCAGCCCTGTCTTCTGCAGTGGCACCAGTTGGGACCTGGAGAACAATCA AAAGAAACCATGAGTTACTTTTGCTGCTCCACCTCCACAAAGGAGACATCACTGCTGCCTCAGA TATGAAAACTTATTTAGTAATATTTTGATCACCAATATAATAATTCTAGTGATTGACTTTCCAT GTGCAGTACAGACAGAAATGACTATCGGTTACTTCCAAGACCACTGGCACAAAGATACAATAGA ATTTTAGCATTGTTCAGAATGATAACAAAATGAAAATACCCACCTCCATTCTACTCATGAGCCT TCTAGAACGTAACTGCGCAATGGCATCTTCTGTGGTAGCTGTGCGGGCTGTCCCATAACAAATA GCACATAAGTTCATACTGTTATTGATGCACCAAACATAACTGCAGATCGAGGTTTGCAAAATCA TACCTGTTGGTGATTGAGCGAACCTATACTCTATGTCATGTTCTGTATCCCAATGACCCTGTCA GCAGGACCTAAGGTAAGATATGTTGAACATATTGCAATCACTCTAAGAAATGTCAATTTGTAGT ACCTGACCAAGGCTTCCATGAGGTGTCAGGAAATAATGGTCATCAGGAACATCAGGAGGGTTTA GCACATTATGGAAAAATATTGTTATGGAATCAAAGTAAAATTGTGGACGGGGTGAATTGTGATC CCCATCGAATTTAATAATGTTTTTGTCTCCCTGCAGATGCATTTAAATCAACCATATATTACTA CCTTATCAGACAAAGGAATCATTTGTCCACATTGAAGGGTAAGGTGGAAACTTACAACATAGGA TTCATAGATTTTGTCTGAATGATGGGGCAGTATAAAATCATCTTCAGTCGCATGTCCAAACAAA GCAGGAACAAAGCACCGCTTTGCTACCTGAAAAATTAAATTTCAGATATTAATTGTGTACTGAT GTATGGTCACAACTGTCACAAATAAATGGAGCGGAGGTGTTTTACAGCATTATCTGATTATCTC AACTATATAAATCAACATATAGTAGTGGTGGAGGCAGTATGCCATCCCACTACCACCACTTGAA TATCAGTATCTTCTGTGGATAGATATAAGACTCTATTTGTATGGTGATGTTTTGGTGCAAACTG TACATGTTCTTTTCTAGAGAAATATATATCTCCATTTAAGTTTAGAAATTGTCACATATTTGTT TGGAATAGATTGCAACACACAAGTATTTGGCTATTCAAATAAAATTGCAGTGTCATTCACAGTT GGGAGAAGAAAATGCATGCACATCCTATGAAAAGGTTTGCCTTCCTTTGTTTCTTATTCAGCCT TCTGCTCTTGTTTACTCAAGGGCACAAGGGGGGAATGAAGAAAGAATTGTATATGAAAGCCAAC CTAGCAATCTAGGGCTGGGCATCAAAATTGAAAAAGAACAGAGATGCTATAGCAAAAGCTCCTA AAATTCAATAAGACATGCAAAATAACCAAAAATAAGAATGCAAACACAAAATAGAGATTAGAAA AAGGGTAATACCAAAAGCAAACTGAATCAAAATCAAATAAAGAGGTCAAAGATTATGATAAATG AAATCTTCCCCCATGGATACAATGCGTGTAATCTAGACAAGGAGGGGCAAATCACTACACCAGC CAAAACATTGGAGCAACACAATATTTAGTATATGGACGGTAGCAAACCTGAATGGTATCAAGTT CCATGATGTCAAAGCTGGCTTTTCTCTTGACAACCTTTCGCATATGTTGTATTGCTAGTTTCAC CTAAGAAACAAACAAAAGTTCCACAATAAATAAGATACAAATATGGGGCCTACCCTTATGACAC TGTCATAAAGACTAAGCATATCTATCATCAAATAAAATTAGTACAGTTAACAAATTAAATATAA CTGGAAACACCAAAAAACAGATGTCACAATCTTCTGAGAAATGCACAGATGGCTGGAAACAGTT TATGCACCATTGGAACAAATTGTAGTTGCTAACTTGATAGTTGCCATGGGTGTCCCCAATAAGG TCAATCATCCAATGGCAAGACTAGGTTGCTTTCTACACAAGTTCAGTTTGTTTCCAAGTTTGTC AGCTAAGAGATTATAAGAACGGATTTATTAATTCAATGAAAGCCTGATTAGTTGTTTGTTTAGT TTTATTTGTCAGAGAAACGATTAGATATGGATTATCAGCCAAGGATGACATCTATATAAGCTAG CTTATGCGGTACAATGCAGTATGATTGCAAGCATCATGCAGTCACGGTAGCAGGTGCCACAAGG GAGTAATGTTTAGAGCAACTGTTAATAACAGCACAGTAAAGTTAAAGCACATATCAACTATAAT AGTTACTGGACCAACAATTTCATCACCGAAAAGCAAAAAGTTCATTTCATCAAATGATGCTTAC CGTGAATTTTGGTAGTGGATATTTATATGTATCCACTAGTTCCATCATCAAGTCAACCAGGTTA GAAAATGGACTGTCAAGAACCATTCCAGCAATTGATGGATCCTCTGCTCCATACATCAGACTGA AAAATAAAGATAGCAGATTTCATAAACACTAAAAGGCTAAAATTATATAGAATGATGATGTGTA TTATGTACAATAGGACAACGACTGTAAATGTGAGGAGATTTGTGTGGGACTGTGGGTGTTTTTT GGGGGCGGCAGGTGCTACATACTTAAGGATAATATTTCACATACTAAAGGATGATAATCGGCAT CACTCTTTTCCAATTAGCAGCTCAAGTATTGGGATAGCAGGTGTCCTAAAAGAATACTAAAGAT GAATGCCATCCTAACATAATTTACTCATTTAAAGAAGATACCTTGTTACTGCACCCATTGAGCG GCCCCACAGACCAATACAAGATATGTTCCCATCTGTCCGCAAATGATTGACAACAGCTTTCAGA TCTTCTCTCTGTAAAGAAAAACAGATATCATCTACCATTATGCTCTTCGAATAGTGTAAAAGAA TTGCATTAGCCTAAAAAAATCTATGCTTGGTGCCTTGCTGGCAATGTGCTGTTACTGAGACAAG CTGATGCAGAATTGAAGAAGAAGCATGTCAATATGATTTCTGTAGAAAGGTTTATATTTCAGTC TCTACTCTCTAGCCCTCCATTTAATAGCTGTTATAATCATTTTCCAGGTTATTTCTTTCTGAAC GACAACATGAAGAAATATGAAGTATTCAACTAGCTTTGAATGCACAAAGTTTACAAGCAAACAG AAGGTTTTAAAAAAGAACAAGTACAAACAGAAGGTTTTAAAAAAGAACAAGTATCATATTTATC TTCTATAAGTACAAGAATGACTCACTTCATTCCAGCCTAATGTAACATGTTCTCCTTCAGAGAG TCCAGACCCTGAAAAGTCCAGTGTAAAGACTGTAATATTTGATGGTAGAAGAATAATTGCGGCT TCACTAGCATCGGCTCTGCATCCA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.214118363

Conservation Information
Conserved circRNAs	NA
PMCS	0.214118363

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							13928815-13932311(-)
13928742-13933258(-)
						
						Potential amino acid sequence
						
							MMASMWSTHLIVYQICPTLRKMRIDGCRADASEAAIILLPSNITVFTLDFSGSGLSEGEHVTLG
WNEREDLKAVVNHLRTDGNISCIGLWGRSMGAVTSLMYGAEDPSIAGMVLDSPFSNLVDLMMEL
VDTYKYPLPKFTVSII*(-)
MDAEPMLVKPQLFFYHQILQSLHWTFQGLDSLKENMLH*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	13928815-13932311(-) 13928742-13933258(-)
Potential amino acid sequence	MMASMWSTHLIVYQICPTLRKMRIDGCRADASEAAIILLPSNITVFTLDFSGSGLSEGEHVTLG WNEREDLKAVVNHLRTDGNISCIGLWGRSMGAVTSLMYGAEDPSIAGMVLDSPFSNLVDLMMEL VDTYKYPLPKFTVSII(-) MDAEPMLVKPQLFFYHQILQSLHWTFQGLDSLKENMLH(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os03g0358975_circ_g.1

Address

Any questions?

Supported by