Plant Circular RNA Database

Detail information of Zm00001d011483_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d011483_circ_g.1
					
						ID in PlantcircBase
						zma_circ_009733
					
						Alias
						zma_circ_0002855
					
						Organism
						
							Zea mays						
					
						Position
						
							chr8: 151886536-151890720  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d011483						
					
						Parent gene annotation
						
							Transducin/WD40 repeat-like superfamily protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d011483_T031:6
Zm00001d011483_T009:6
Zm00001d011483_T005:6
Zm00001d011483_T036:6
Zm00001d011483_T029:6
Zm00001d011483_T002:6
Zm00001d011483_T014:6
Zm00001d011483_T048:1
Zm00001d011483_T019:6
Zm00001d011483_T037:6
Zm00001d011483_T050:6
Zm00001d011483_T025:6
Zm00001d011483_T004:6
Zm00001d011483_T032:6
Zm00001d011483_T043:6
Zm00001d011483_T001:6
Zm00001d011483_T022:6
Zm00001d011483_T035:6
Zm00001d011483_T042:6
Zm00001d011483_T021:4
Zm00001d011483_T020:6
Zm00001d011483_T046:6
Zm00001d011483_T026:6
Zm00001d011483_T007:6
Zm00001d011483_T044:6
Zm00001d011483_T017:6
Zm00001d011483_T030:7
Zm00001d011483_T012:6
Zm00001d011483_T008:6
Zm00001d011483_T016:6
Zm00001d011483_T033:6
Zm00001d011483_T045:6
Zm00001d011483_T040:5
Zm00001d011483_T038:6
Zm00001d011483_T027:6
Zm00001d011483_T003:6
Zm00001d011483_T006:4

General Information
CircRNA Name	Zm00001d011483_circ_g.1
ID in PlantcircBase	zma_circ_009733
Alias	zma_circ_0002855
Organism	Zea mays
Position	chr8: 151886536-151890720 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d011483
Parent gene annotation	Transducin/WD40 repeat-like superfamily protein
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d011483_T031:6 Zm00001d011483_T009:6 Zm00001d011483_T005:6 Zm00001d011483_T036:6 Zm00001d011483_T029:6 Zm00001d011483_T002:6 Zm00001d011483_T014:6 Zm00001d011483_T048:1 Zm00001d011483_T019:6 Zm00001d011483_T037:6 Zm00001d011483_T050:6 Zm00001d011483_T025:6 Zm00001d011483_T004:6 Zm00001d011483_T032:6 Zm00001d011483_T043:6 Zm00001d011483_T001:6 Zm00001d011483_T022:6 Zm00001d011483_T035:6 Zm00001d011483_T042:6 Zm00001d011483_T021:4 Zm00001d011483_T020:6 Zm00001d011483_T046:6 Zm00001d011483_T026:6 Zm00001d011483_T007:6 Zm00001d011483_T044:6 Zm00001d011483_T017:6 Zm00001d011483_T030:7 Zm00001d011483_T012:6 Zm00001d011483_T008:6 Zm00001d011483_T016:6 Zm00001d011483_T033:6 Zm00001d011483_T045:6 Zm00001d011483_T040:5 Zm00001d011483_T038:6 Zm00001d011483_T027:6 Zm00001d011483_T003:6 Zm00001d011483_T006:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTTGCAGGTATATGTGTGCGCATGCCTTGTCACTCAGCCATCCTGGTATAAGATGTCGTTGCCT
TGCAGCATATGGGGACCCTGTTAGTGCTGTGAAATGgtatgttgcaattgtatggccagatatt
ccctcttttgctgtgtgcaaagcaagtgattggtcagttgttgattcaggcacagggaagcttt
ttgcctgg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GTATGTTGCAATTGTATGGCCAGATATTCCCTCTTTTGCTGTGTGCAAAGCAAGTGATTGGTCA
GTTGTTGATTCAGGCACAGGGAAGCTTTTTGCCTGGGACACCTGTCGAGACAGATATGCTTTAG
TAGAGAGTGCATTGGCCCCAAGAATGCCACTTGTTGTGAAAGGTGGTTCTTCTAAAAAGGCAAA
AGAAGCAGCAGCAGCTGCAGCTCAAGCAGCAGCTGCTGCAGCTAGTGCTGCTTCTGCCGCCACA
GTGCAAGTGCGTATCTTATTAGATGATGGAACAGCACATGTTCTGCAGAGATCGATTGATGGTC
GTAGTGAACCGGTCAGTAATTATCGCTCGTCTTCGTCTCCCCTTTTTGTTTTTTTTGTAGCACT
AATCAGTCTTCAATTCCAATTCTTTGTTCATAGTTTGACGGAGATCTGAACTTATCTTTTGTAG
ATACCCTAATATTGTGTCCGAAATATGCTGCAGTAATAGTTTGTGATGGGAATTTTTCAGATTA
AGGGCTTGTTTGGTTAGAAGGGGATTGGAGGGGATTGAGGGGGAAATTAGTTCATTTCCCCCTC
AATCCCCTCCAATTCCCTTCAATCCCCTTCTAACCAAACAAGCCCTAAAGAAGTTAAAAATTGC
ATTTCATAGTAATATGTTTTCTTCTAATTAACGTGCTTATTAAGTATTAACATCGACGAGCTAT
ATGATGTCTGACTAATTTAAACCATTGGCTGAACTTTTTTATGCTTGCTCAATTGCATAAAAGT
TCCTGTTTGTGGACAATGTGTCAACACACTGACAATTCTGTATATTGAATTTTATTGTTATCTT
TACACTTTCCTTGTCTCATCATGCTGGTGTCATTGGAAACTAGCTGTGCTTTCATATCATGCTG
TAGTTGCATCGAGCATTAGCAGAGTGATACTGACATAGGTGTTGCTAGGTTGAGTTTCTTTCTT
TCACTTCTGAGTACATCTTTGTTTGACCAGTGAACTATAAACCCTTAACTTTCTGTCCATTGTC
TTCATCAGCAAAAACTCTTCTGTCTAGTGTAATGGCTGTGATATTTCAGGTTATTGGACTGCAT
GGTGGTGCTTTACTTGGTGTCACATACCGCACATCTCGTAGAATCAGTCCTTTGACAGCAACAG
CTATATCAACTGTTCAATCGATGCCCTTATCAGGTTTTGGTGGAAGTGGATCATCTTTTGCATC
CGATGATCCGTTTTCTTCTAAGGAAGGGCCTCCACAAAATTTCCAATTGTACAGGTATGCATTT
AAGTATTGTTCTTTTTTTCTTGAATACACAGATTTGTGTGTCTTTGTATTAAGAGAGAATAAAC
ACCCCTTTATAGTTTCTCACTGCCTCACTCCGGGGCGAGCCATCAGCGGTGTCTGATAGTTATT
TCTTGGCTGATACATTGTTCTTATGTACCTGTAAAGTTCACTTTGCTTGTACAATGATCTAAAG
AGCTAACATCTTTGGGAGACTAAAAGTTACATTTTAAATTGGTGCAGCTGGGAGACCTATCAGC
CTGTAAGCGGCCTACTTGCACAACCTGAGTGGACCGCGTGGGACCAAACTGTGGAGTATTGTGC
ATTTGCTTATCAGCAGTATATAGTAATTTCTTCCTTGCGGCCTCAATTTAGGTACCTTGGAGAT
GTCTCAATTCCCTTTGCAACTGGTGCCGTCTGGCATCGAAGGCAGTTATTTGTGGCTACACCAA
CAACAATTGAGTAAGATTTTAATCTTCATACAATTACTTCAATAATGTTCCCTTTTGCCCTTGA
AAGAAGATATCTCAATATTGCTATGCTTATGATGCAAGCTTGTATATACTACTAGCAATAGCCT
ATGCTAACGCTACGATCCTAGTAAGGGGAGGGGAGGGGTCCGTGGCGGCGGCGTGAGTGGAGGG
GTTGACGGTGGCGGTGGTGGCGGCACGAGTGAGGGGAGGGGGAGGCTAGGGGTGGTGGCATGGT
CACGTGTGAGAGGGGGAGGGATGAGAGATGATCCAAATAATATTGTCCATTTGATTTGAGTGAG
TAATGGAGAGAGTTATCCAACGATCTGAACCGTTGGTTTTGATGATGTGTTAAGTCTGGGTGTA
ATTTGTTTGGTGGATTTAGTGGAGATTATGAGTGTGGGGGTGATTTGGTTGGGTGTGTTTTGTA
AAGTTTAAACTGGTGGATTATATAGTGTTATATATATAGAAATGGATAATGACGTATGAAGGTT
ATGAACTTGTGATTGCTTGTATGATTAAAATTGTAGTCTGTAGAAGCATATAGACAGCTTAGCA
AATAATTTCATTTTCAGGGTAATTTTAAAATTCGAATCGTGTTTAGTGGTACCAAAAATGATAG
GGTCAAGTTATTAAGCACACAGTTTATTTGATTCTTCTTCGAGATTTTCTTGTTTCCAGGATTA
TAGTTGCATATAAGTTGAACATGTAGTCTAGGTTGTGTCAAGCGATCAGTGTTTTCAACTTTTG
ATGATGGCTCATGGACACACCTTCTGTTCCTTGATCTTGTAAACAATATTTCCCAGGTGTGTCT
TTGTTGATGCTGGAGTGGCAGATATTGACATTGAAACGAAAAGGAGAAAAGAAGAAATGAAAGC
AAGAGAAGCTCAGAGTCGGGCAGTTGAGGAGCATGGAGATTTGGCTCTTATCACTGTTGAAGCT
CCCCAGGTTACCGTGAGTGAAAAGGTACCACTGAGGCCACCAATGTTGCAGGTATGACATGCAG
TATGCTGAGTGCTTTTAGTGCCCATTTTCTCCTTTATTGATAATTTGATATATTGTCTTCTGTT
TTCGTAAGTGTTACCTGAAGTTAATGTATAATAAGAAATTCTGGACATAATCAACATGATTCTT
TTCTTTTTGGTGTTTTAGACTTTCTGCACTTATCAACAGAAATCTCAAGATATCAAGCCTTGTA
AAATGCAACATACACTTTTGAAGTTCTATGTTAGATATAAAAATAGTTTCACACTCCTTATCAT
TAGACAAAATGTATGGAGCAATGCTTATTCTCTCTAGTTTTGTCATAAATCAAACTTCAACCAA
GGTTCTAGAAAATATATCAACATCTAGAATACCCAAAAAATGCAATATAAGATATATTTGATTG
GTTGATTTAGTGAAAAAACTTGATGCTGTATATATTCGTGCATTTTTCTAAAAACTTGGTCAAA
GTTACATAAGTTTGACTTAGGACAAAACTAAAGTGGCCTACATCTTGAAACAGTGGGAGTACTA
GTCATTACTCAATATTTTGAGGCTATCAATCTGAGTTTTTTTTGAGAAACAGAATTATTTATGT
CGAGGTGCCAATATTTGCCCAATGCCGTGTTGAAAAATTAACATTTATTTCAAGTATTTTTAAC
CCTTACAAGTATTGCCCAATGACCACAATTTATTGTAAAATCTTCTGTGAACCAAAGCTATCTT
GGAAAATCAGGACCAGGTTTAACCTGGCATTTTCATTTGAGTAGTAATCTATCTCTTCACTTCT
TCAGGGTACATTTAGTTTCAAACAGCCTGCTATATTTTTTCAATGTTTTGTTATTTTTTTCCTG
AAAATTGGCAATATGTTAATATATTGAATGTTGCACATGGTGACATAATTTATTGTTCTGACAT
CCTTCACTTTTGTTCCAGGTTGTTCGTTTGGCCTCCTTTCAGCACGCTCCATCAATACCTCCAT
TTATAGTGCCAAAGCAATCCAAGTTCGATGGAGACGATTCAGTGTTTCAGAAGGAACTGGATGA
CAGAAGATATGCTGAAGTTGCTGTTGCTGGAGGAGGGGTGTCTGTTGCTGTAACTCGTTTCCCT
CCGGAACAGAAGAGACCTATCGGACCTCTTGTTGTGGTTGGTGTAAGAGATGGAGTTCTCTGGC
TTGTTGACAGGTAACATATACTCTCATGAGCATCTTATCTCTTTATTAAAAGAGCAAGAGCAGT
TCCTTGATGCACAATGAAATGCCGTGGAATTAAATTTTCTTCAAGCAACTTACCTTGTCACCTT
TTGTTACTCTTTGATATGCTTACTTGGATTCAACTACGAAAAATTCCATGTTCTTTGCAGGTAT
ATGTGTGCGCATGCCTTGTCACTCAGCCATCCTGGTATAAGATGTCGTTGCCTTGCAGCATATG
GGGACCCTGTTAGTGCTGTGAAATG
						
					

			
		

Sequences
Splice junction sequence	TTTGCAGGTATATGTGTGCGCATGCCTTGTCACTCAGCCATCCTGGTATAAGATGTCGTTGCCT TGCAGCATATGGGGACCCTGTTAGTGCTGTGAAATGgtatgttgcaattgtatggccagatatt ccctcttttgctgtgtgcaaagcaagtgattggtcagttgttgattcaggcacagggaagcttt ttgcctgg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GTATGTTGCAATTGTATGGCCAGATATTCCCTCTTTTGCTGTGTGCAAAGCAAGTGATTGGTCA GTTGTTGATTCAGGCACAGGGAAGCTTTTTGCCTGGGACACCTGTCGAGACAGATATGCTTTAG TAGAGAGTGCATTGGCCCCAAGAATGCCACTTGTTGTGAAAGGTGGTTCTTCTAAAAAGGCAAA AGAAGCAGCAGCAGCTGCAGCTCAAGCAGCAGCTGCTGCAGCTAGTGCTGCTTCTGCCGCCACA GTGCAAGTGCGTATCTTATTAGATGATGGAACAGCACATGTTCTGCAGAGATCGATTGATGGTC GTAGTGAACCGGTCAGTAATTATCGCTCGTCTTCGTCTCCCCTTTTTGTTTTTTTTGTAGCACT AATCAGTCTTCAATTCCAATTCTTTGTTCATAGTTTGACGGAGATCTGAACTTATCTTTTGTAG ATACCCTAATATTGTGTCCGAAATATGCTGCAGTAATAGTTTGTGATGGGAATTTTTCAGATTA AGGGCTTGTTTGGTTAGAAGGGGATTGGAGGGGATTGAGGGGGAAATTAGTTCATTTCCCCCTC AATCCCCTCCAATTCCCTTCAATCCCCTTCTAACCAAACAAGCCCTAAAGAAGTTAAAAATTGC ATTTCATAGTAATATGTTTTCTTCTAATTAACGTGCTTATTAAGTATTAACATCGACGAGCTAT ATGATGTCTGACTAATTTAAACCATTGGCTGAACTTTTTTATGCTTGCTCAATTGCATAAAAGT TCCTGTTTGTGGACAATGTGTCAACACACTGACAATTCTGTATATTGAATTTTATTGTTATCTT TACACTTTCCTTGTCTCATCATGCTGGTGTCATTGGAAACTAGCTGTGCTTTCATATCATGCTG TAGTTGCATCGAGCATTAGCAGAGTGATACTGACATAGGTGTTGCTAGGTTGAGTTTCTTTCTT TCACTTCTGAGTACATCTTTGTTTGACCAGTGAACTATAAACCCTTAACTTTCTGTCCATTGTC TTCATCAGCAAAAACTCTTCTGTCTAGTGTAATGGCTGTGATATTTCAGGTTATTGGACTGCAT GGTGGTGCTTTACTTGGTGTCACATACCGCACATCTCGTAGAATCAGTCCTTTGACAGCAACAG CTATATCAACTGTTCAATCGATGCCCTTATCAGGTTTTGGTGGAAGTGGATCATCTTTTGCATC CGATGATCCGTTTTCTTCTAAGGAAGGGCCTCCACAAAATTTCCAATTGTACAGGTATGCATTT AAGTATTGTTCTTTTTTTCTTGAATACACAGATTTGTGTGTCTTTGTATTAAGAGAGAATAAAC ACCCCTTTATAGTTTCTCACTGCCTCACTCCGGGGCGAGCCATCAGCGGTGTCTGATAGTTATT TCTTGGCTGATACATTGTTCTTATGTACCTGTAAAGTTCACTTTGCTTGTACAATGATCTAAAG AGCTAACATCTTTGGGAGACTAAAAGTTACATTTTAAATTGGTGCAGCTGGGAGACCTATCAGC CTGTAAGCGGCCTACTTGCACAACCTGAGTGGACCGCGTGGGACCAAACTGTGGAGTATTGTGC ATTTGCTTATCAGCAGTATATAGTAATTTCTTCCTTGCGGCCTCAATTTAGGTACCTTGGAGAT GTCTCAATTCCCTTTGCAACTGGTGCCGTCTGGCATCGAAGGCAGTTATTTGTGGCTACACCAA CAACAATTGAGTAAGATTTTAATCTTCATACAATTACTTCAATAATGTTCCCTTTTGCCCTTGA AAGAAGATATCTCAATATTGCTATGCTTATGATGCAAGCTTGTATATACTACTAGCAATAGCCT ATGCTAACGCTACGATCCTAGTAAGGGGAGGGGAGGGGTCCGTGGCGGCGGCGTGAGTGGAGGG GTTGACGGTGGCGGTGGTGGCGGCACGAGTGAGGGGAGGGGGAGGCTAGGGGTGGTGGCATGGT CACGTGTGAGAGGGGGAGGGATGAGAGATGATCCAAATAATATTGTCCATTTGATTTGAGTGAG TAATGGAGAGAGTTATCCAACGATCTGAACCGTTGGTTTTGATGATGTGTTAAGTCTGGGTGTA ATTTGTTTGGTGGATTTAGTGGAGATTATGAGTGTGGGGGTGATTTGGTTGGGTGTGTTTTGTA AAGTTTAAACTGGTGGATTATATAGTGTTATATATATAGAAATGGATAATGACGTATGAAGGTT ATGAACTTGTGATTGCTTGTATGATTAAAATTGTAGTCTGTAGAAGCATATAGACAGCTTAGCA AATAATTTCATTTTCAGGGTAATTTTAAAATTCGAATCGTGTTTAGTGGTACCAAAAATGATAG GGTCAAGTTATTAAGCACACAGTTTATTTGATTCTTCTTCGAGATTTTCTTGTTTCCAGGATTA TAGTTGCATATAAGTTGAACATGTAGTCTAGGTTGTGTCAAGCGATCAGTGTTTTCAACTTTTG ATGATGGCTCATGGACACACCTTCTGTTCCTTGATCTTGTAAACAATATTTCCCAGGTGTGTCT TTGTTGATGCTGGAGTGGCAGATATTGACATTGAAACGAAAAGGAGAAAAGAAGAAATGAAAGC AAGAGAAGCTCAGAGTCGGGCAGTTGAGGAGCATGGAGATTTGGCTCTTATCACTGTTGAAGCT CCCCAGGTTACCGTGAGTGAAAAGGTACCACTGAGGCCACCAATGTTGCAGGTATGACATGCAG TATGCTGAGTGCTTTTAGTGCCCATTTTCTCCTTTATTGATAATTTGATATATTGTCTTCTGTT TTCGTAAGTGTTACCTGAAGTTAATGTATAATAAGAAATTCTGGACATAATCAACATGATTCTT TTCTTTTTGGTGTTTTAGACTTTCTGCACTTATCAACAGAAATCTCAAGATATCAAGCCTTGTA AAATGCAACATACACTTTTGAAGTTCTATGTTAGATATAAAAATAGTTTCACACTCCTTATCAT TAGACAAAATGTATGGAGCAATGCTTATTCTCTCTAGTTTTGTCATAAATCAAACTTCAACCAA GGTTCTAGAAAATATATCAACATCTAGAATACCCAAAAAATGCAATATAAGATATATTTGATTG GTTGATTTAGTGAAAAAACTTGATGCTGTATATATTCGTGCATTTTTCTAAAAACTTGGTCAAA GTTACATAAGTTTGACTTAGGACAAAACTAAAGTGGCCTACATCTTGAAACAGTGGGAGTACTA GTCATTACTCAATATTTTGAGGCTATCAATCTGAGTTTTTTTTGAGAAACAGAATTATTTATGT CGAGGTGCCAATATTTGCCCAATGCCGTGTTGAAAAATTAACATTTATTTCAAGTATTTTTAAC CCTTACAAGTATTGCCCAATGACCACAATTTATTGTAAAATCTTCTGTGAACCAAAGCTATCTT GGAAAATCAGGACCAGGTTTAACCTGGCATTTTCATTTGAGTAGTAATCTATCTCTTCACTTCT TCAGGGTACATTTAGTTTCAAACAGCCTGCTATATTTTTTCAATGTTTTGTTATTTTTTTCCTG AAAATTGGCAATATGTTAATATATTGAATGTTGCACATGGTGACATAATTTATTGTTCTGACAT CCTTCACTTTTGTTCCAGGTTGTTCGTTTGGCCTCCTTTCAGCACGCTCCATCAATACCTCCAT TTATAGTGCCAAAGCAATCCAAGTTCGATGGAGACGATTCAGTGTTTCAGAAGGAACTGGATGA CAGAAGATATGCTGAAGTTGCTGTTGCTGGAGGAGGGGTGTCTGTTGCTGTAACTCGTTTCCCT CCGGAACAGAAGAGACCTATCGGACCTCTTGTTGTGGTTGGTGTAAGAGATGGAGTTCTCTGGC TTGTTGACAGGTAACATATACTCTCATGAGCATCTTATCTCTTTATTAAAAGAGCAAGAGCAGT TCCTTGATGCACAATGAAATGCCGTGGAATTAAATTTTCTTCAAGCAACTTACCTTGTCACCTT TTGTTACTCTTTGATATGCTTACTTGGATTCAACTACGAAAAATTCCATGTTCTTTGCAGGTAT ATGTGTGCGCATGCCTTGTCACTCAGCCATCCTGGTATAAGATGTCGTTGCCTTGCAGCATATG GGGACCCTGTTAGTGCTGTGAAATG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.106755577

Conservation Information
Conserved circRNAs	NA
PMCS	0.106755577

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							151886688-151890717(+)
151886677-151890707(-)
						
					

						Potential amino acid sequence
						
							MPLVVKGGSSKKAKEAAAAAAQAAAAAASAASAATVQVRILLDDGTAHVLQRSIDGRSEPVIGL
HGGALLGVTYRTSRRISPLTATAISTVQSMPLSGFGGSGSSFASDDPYLGDVSIPFATGAVWHR
RQLFVATPTTIECVFVDAGVADIDIETKRRKEEMKAREAQSRAVEEHGDLALITVEAPQVTVSE
KVPLRPPMLQVVRLASFQHAPSIPPFIVPKQSKFDGDDSVFQKELDDRRYAEVAVAGGGVSVAV
TRFPPEQKRPIGPLVVVGVRDGVLWLVDRYMCAHALSLSHPGIRCRCLAAYGDPVSAVKWYVAI
VWPDIPSFAVCKASDWSVVDSGTGKLFAWDTCRDRYALVESALAPRMPLVVKGGSSKKAKEAAA
AAAQAAAAAASAASAATVQVRILLDDGTAHVLQRSIDGRSEPVIGLHGGALLGVTYRTSRRISP
LTATAISTVQSMPLSGFGGSGSSFASDDPYLGDVSIPFATGAVWHRRQLFVATPTTIECVFVDA
GVADIDIETKRRKEEMKAREAQSRAVEEHGDLALITVEAPQVTVSEKVPLRPPMLQVVRLASFQ
HAPSIPPFIVPKQSKFDGDDSVFQKELDDRRYAEVAVAGGGVSVAVTRFPPEQKRPIGPLVVVG
VRDGVLWLVDRYMCAHALSLSHPGIRCRCLAAYGDPVSAVKWYVAIVWPDIPSFAVCKASDWSV
VDSGTGKLFAWDTCRDRYALVESALAPRMPLVVKGGSSKKAKEAAAAAAQAAAAAASAASAATV
QVRILLDDGTAHVLQRSIDGRSEPVIGLHGGALLGVTYRTSRRISPLTATAISTVQSMPLSGFG
GSGSSFASDDPYLGDVSIPFATGAVWHRRQLFVATPTTIECVFVDAGVADIDIETKRRKEEMKA
REAQSRAVEEHGDLALITVEAPQVTVSEKVPLRPPMLQVVRLASFQHAPSIPPFIVPKQSKFDG
DDSVFQKELDDRRYAEVAVAGGGVSVAVTRFPPEQKRPIGPLVVVGVRDGVLWLVDRYMCAHAL
SLSHPGIRCRCLAAYGDPVSAVKWYVAIVWPDIPSFAVCKASDWSVVDSGTGKLFAWDTCRDRY
ALVESALAPRMPLVVKGGSSKKAKEAAAAAAQAAAAAASAASAATVQVRILLDDGTAHVLQRSI
DGRSEPVIGLHGGALLGVTYRTSRRISPLTATAISTVQSMPLSGFGGSGSSFASDDPYLGDVSI
PFATGAVWHRRQLFVATPTTIECVFVDAGVADIDIETKRRKEEMKAREAQSRAVEEHGDLALIT
VEAPQVTVSEKVPLRPPMLQVVRLASFQHAPSIPPFIVPKQSKFDGDDSVFQKELDDRRYAEVA
VAGGGVSVAVTRFPPEQKRPIGPLVVVGVRDGVLWLVDRYMCAHALSLSHPGIRCRCLAAYGDP
VSAVK(+)
MHSLLKHICLDRCPRQKASLCLNQQLTNHLLCTQQKREYLAIQLQHTISQH*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	151886688-151890717(+) 151886677-151890707(-)
Potential amino acid sequence	MPLVVKGGSSKKAKEAAAAAAQAAAAAASAASAATVQVRILLDDGTAHVLQRSIDGRSEPVIGL HGGALLGVTYRTSRRISPLTATAISTVQSMPLSGFGGSGSSFASDDPYLGDVSIPFATGAVWHR RQLFVATPTTIECVFVDAGVADIDIETKRRKEEMKAREAQSRAVEEHGDLALITVEAPQVTVSE KVPLRPPMLQVVRLASFQHAPSIPPFIVPKQSKFDGDDSVFQKELDDRRYAEVAVAGGGVSVAV TRFPPEQKRPIGPLVVVGVRDGVLWLVDRYMCAHALSLSHPGIRCRCLAAYGDPVSAVKWYVAI VWPDIPSFAVCKASDWSVVDSGTGKLFAWDTCRDRYALVESALAPRMPLVVKGGSSKKAKEAAA AAAQAAAAAASAASAATVQVRILLDDGTAHVLQRSIDGRSEPVIGLHGGALLGVTYRTSRRISP LTATAISTVQSMPLSGFGGSGSSFASDDPYLGDVSIPFATGAVWHRRQLFVATPTTIECVFVDA GVADIDIETKRRKEEMKAREAQSRAVEEHGDLALITVEAPQVTVSEKVPLRPPMLQVVRLASFQ HAPSIPPFIVPKQSKFDGDDSVFQKELDDRRYAEVAVAGGGVSVAVTRFPPEQKRPIGPLVVVG VRDGVLWLVDRYMCAHALSLSHPGIRCRCLAAYGDPVSAVKWYVAIVWPDIPSFAVCKASDWSV VDSGTGKLFAWDTCRDRYALVESALAPRMPLVVKGGSSKKAKEAAAAAAQAAAAAASAASAATV QVRILLDDGTAHVLQRSIDGRSEPVIGLHGGALLGVTYRTSRRISPLTATAISTVQSMPLSGFG GSGSSFASDDPYLGDVSIPFATGAVWHRRQLFVATPTTIECVFVDAGVADIDIETKRRKEEMKA REAQSRAVEEHGDLALITVEAPQVTVSEKVPLRPPMLQVVRLASFQHAPSIPPFIVPKQSKFDG DDSVFQKELDDRRYAEVAVAGGGVSVAVTRFPPEQKRPIGPLVVVGVRDGVLWLVDRYMCAHAL SLSHPGIRCRCLAAYGDPVSAVKWYVAIVWPDIPSFAVCKASDWSVVDSGTGKLFAWDTCRDRY ALVESALAPRMPLVVKGGSSKKAKEAAAAAAQAAAAAASAASAATVQVRILLDDGTAHVLQRSI DGRSEPVIGLHGGALLGVTYRTSRRISPLTATAISTVQSMPLSGFGGSGSSFASDDPYLGDVSI PFATGAVWHRRQLFVATPTTIECVFVDAGVADIDIETKRRKEEMKAREAQSRAVEEHGDLALIT VEAPQVTVSEKVPLRPPMLQVVRLASFQHAPSIPPFIVPKQSKFDGDDSVFQKELDDRRYAEVA VAGGGVSVAVTRFPPEQKRPIGPLVVVGVRDGVLWLVDRYMCAHALSLSHPGIRCRCLAAYGDP VSAVK(+) MHSLLKHICLDRCPRQKASLCLNQQLTNHLLCTQQKREYLAIQLQHTISQH*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d011483_circ_g.1

Address

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