CircRNA Name |
1_circ_ag.4 |
ID in PlantcircBase |
ath_circ_002476 |
Alias |
At_ciR386, Ath_circ_FC0339 |
Organism |
Arabidpsis thaliana |
Position |
chr1: 4863838-4870979 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
ag-circRNA
|
Identification method |
CIRI, find_circ |
Parent gene |
NA |
Parent gene annotation |
NA |
Parent gene strand |
NA |
Alternative splicing |
1_circ_ag.3 AT1G14240_circ_g.1 AT1G14240_circ_g.2 AT1G14240_circ_g.3 |
Support reads |
7/42 |
Tissues |
leaf/root, leaf, aerial, inflorescences, whole_plant |
Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
NA
|