| CircRNA Name |
AT4G03440_circ_g.1 |
| ID in PlantcircBase |
ath_circ_029589 |
| Alias |
Ath_circ_FC2536, AT4G03440_C1 |
| Organism |
Arabidpsis thaliana |
| Position |
chr4: 1525028-1525575 JBrowse» |
| Reference genome |
TAIR10.38 |
| Type |
e-circRNA
|
| Identification method |
CIRCexplorer, KNIFE, PcircRNA_finder, circRNA_finder, CIRI2 |
| Parent gene |
AT4G03440 |
| Parent gene annotation |
Ankyrin repeat family protein
|
| Parent gene strand |
- |
| Alternative splicing |
NA |
| Support reads |
3 |
| Tissues |
inflorescences, whole_plant, leaf |
| Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
| Splicing signals |
CT-AC
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
| Number of exons covered |
AT4G03440.2:1
AT4G03440.3:1
AT4G03440.1:1
|
