Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G16190_circ_g.2 |
ID in PlantcircBase | ath_circ_002873 |
Alias | Ath_circ_FC0395 |
Organism | Arabidpsis thaliana |
Position | chr1: 5545344-5545453 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | KNIFE, PcircRNA_finder, CIRI-full |
Parent gene | AT1G16190 |
Parent gene annotation |
RAD23A |
Parent gene strand | + |
Alternative splicing | AT1G16190_circ_g.3 |
Support reads | 1 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G16190.1:1 AT1G16190.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.240573906 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017;Chen et al., 2017a |