Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os11g0158832_circ_g.1 |
ID in PlantcircBase | osa_circ_008524 |
Alias | Os11circ01009 |
Organism | Oryza sativa |
Position | chr11: 2842829-2843702 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ue-circRNA |
Identification method | CIRCexplorer, SMALT, Segemehl |
Parent gene | Os11g0158832 |
Parent gene annotation |
Similar to Associated with HOX family protein, expressed. (Os11t 0158832-00) |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 14/2 |
Tissues | leaf and panicle/shoot |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | Os11t0158832-00:1 |
Conservation Information | |
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Conserved circRNAs | osi_circ_003021* |
PMCS | 0.5980435 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | osa-miR5809 |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015;Chu et al., 2017 |