Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G70490_circ_g.4 |
ID in PlantcircBase | ath_circ_009466 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 26564434-26564759 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | KNIFE, PcircRNA_finder, circRNA_finder, find_circ |
Parent gene | AT1G70490 |
Parent gene annotation |
ADP-ribosylation factor 2-B |
Parent gene strand | - |
Alternative splicing | AT1G70490_circ_g.1 AT1G70490_circ_g.2 AT1G70490_circ_g.3 AT1G70490_circ_g.5 AT1G70490_circ_g.6 AT1G70490_circ_g.7 |
Support reads | 4 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G70490.2:2 AT1G70490.7:2 AT1G70490.4:2 AT1G70490.6:2 AT1G70490.3:2 AT1G70490.5:2 AT1G70490.1:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.69931012 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |