Plant Circular RNA Database

Detail information of Zm00001d025830_circ_g.4

			
				
						 General Information
					

				
						CircRNA Name
						Zm00001d025830_circ_g.4
					

						ID in PlantcircBase
						zma_circ_010330
					

						Alias
						zma_circ_0000065
					

						Organism
						
							Zea mays						
					

						Position
						
							chr10: 131200671-131202723  JBrowse»						
					

						Reference genome
						
							AGPv4.38						
					

						Type  
						
							u-circRNA							
									
								

					

						Identification method
						find_circ
					

						Parent gene
						
							Zm00001d025830						
					

						Parent gene annotation
						
							 dicer-like 103
							
					

						Parent gene strand
						-
					

						Alternative splicing
						
							Zm00001d025830_circ_g.1 Zm00001d025830_circ_g.2 Zm00001d025830_circ_g.3 Zm00001d025830_circ_g.5 						
					

						Support reads
						NA
					

						Tissues
						leaf, root
					

						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

					

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

					

						Number of exons covered
						Zm00001d025830_T031:6
Zm00001d025830_T055:6
Zm00001d025830_T074:5
Zm00001d025830_T032:6
Zm00001d025830_T049:6
Zm00001d025830_T025:6
Zm00001d025830_T057:6
Zm00001d025830_T066:6
Zm00001d025830_T015:6
Zm00001d025830_T070:6
Zm00001d025830_T010:6
Zm00001d025830_T050:6
Zm00001d025830_T039:6
Zm00001d025830_T001:5
Zm00001d025830_T080:4
Zm00001d025830_T024:6
Zm00001d025830_T027:6
Zm00001d025830_T077:4
Zm00001d025830_T073:6
Zm00001d025830_T078:4
Zm00001d025830_T084:5
Zm00001d025830_T046:6
Zm00001d025830_T021:6
Zm00001d025830_T016:6
Zm00001d025830_T083:6
Zm00001d025830_T037:6
Zm00001d025830_T075:4
Zm00001d025830_T019:5
Zm00001d025830_T007:6
Zm00001d025830_T068:6
Zm00001d025830_T059:6
Zm00001d025830_T058:6
Zm00001d025830_T065:6
Zm00001d025830_T069:2
Zm00001d025830_T028:6
Zm00001d025830_T008:6
Zm00001d025830_T006:3
Zm00001d025830_T013:6
Zm00001d025830_T022:6
Zm00001d025830_T076:6
Zm00001d025830_T054:6
Zm00001d025830_T056:6
Zm00001d025830_T041:6
Zm00001d025830_T079:2
Zm00001d025830_T004:6
Zm00001d025830_T020:6
Zm00001d025830_T036:6
Zm00001d025830_T063:6
Zm00001d025830_T042:6
Zm00001d025830_T012:5
Zm00001d025830_T033:6
Zm00001d025830_T011:6
Zm00001d025830_T009:1
Zm00001d025830_T061:6
Zm00001d025830_T029:6
Zm00001d025830_T023:6
Zm00001d025830_T048:6
Zm00001d025830_T071:6
Zm00001d025830_T047:6
Zm00001d025830_T062:6
Zm00001d025830_T038:6
Zm00001d025830_T043:6
Zm00001d025830_T081:6
Zm00001d025830_T002:6
Zm00001d025830_T045:4
Zm00001d025830_T072:6
Zm00001d025830_T018:3
Zm00001d025830_T060:5
Zm00001d025830_T051:6
Zm00001d025830_T067:4
Zm00001d025830_T052:6
Zm00001d025830_T040:6
Zm00001d025830_T035:4
Zm00001d025830_T034:6
Zm00001d025830_T082:6
Zm00001d025830_T064:1
Zm00001d025830_T026:6
Zm00001d025830_T003:6
Zm00001d025830_T014:6
Zm00001d025830_T044:6
Zm00001d025830_T017:6
Zm00001d025830_T005:6
Zm00001d025830_T030:6
Zm00001d025830_T053:6

					

			
		

General Information
CircRNA Name	Zm00001d025830_circ_g.4
ID in PlantcircBase	zma_circ_010330
Alias	zma_circ_0000065
Organism	Zea mays
Position	chr10: 131200671-131202723 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d025830
Parent gene annotation	dicer-like 103
Parent gene strand	-
Alternative splicing	Zm00001d025830_circ_g.1 Zm00001d025830_circ_g.2 Zm00001d025830_circ_g.3 Zm00001d025830_circ_g.5
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d025830_T031:6 Zm00001d025830_T055:6 Zm00001d025830_T074:5 Zm00001d025830_T032:6 Zm00001d025830_T049:6 Zm00001d025830_T025:6 Zm00001d025830_T057:6 Zm00001d025830_T066:6 Zm00001d025830_T015:6 Zm00001d025830_T070:6 Zm00001d025830_T010:6 Zm00001d025830_T050:6 Zm00001d025830_T039:6 Zm00001d025830_T001:5 Zm00001d025830_T080:4 Zm00001d025830_T024:6 Zm00001d025830_T027:6 Zm00001d025830_T077:4 Zm00001d025830_T073:6 Zm00001d025830_T078:4 Zm00001d025830_T084:5 Zm00001d025830_T046:6 Zm00001d025830_T021:6 Zm00001d025830_T016:6 Zm00001d025830_T083:6 Zm00001d025830_T037:6 Zm00001d025830_T075:4 Zm00001d025830_T019:5 Zm00001d025830_T007:6 Zm00001d025830_T068:6 Zm00001d025830_T059:6 Zm00001d025830_T058:6 Zm00001d025830_T065:6 Zm00001d025830_T069:2 Zm00001d025830_T028:6 Zm00001d025830_T008:6 Zm00001d025830_T006:3 Zm00001d025830_T013:6 Zm00001d025830_T022:6 Zm00001d025830_T076:6 Zm00001d025830_T054:6 Zm00001d025830_T056:6 Zm00001d025830_T041:6 Zm00001d025830_T079:2 Zm00001d025830_T004:6 Zm00001d025830_T020:6 Zm00001d025830_T036:6 Zm00001d025830_T063:6 Zm00001d025830_T042:6 Zm00001d025830_T012:5 Zm00001d025830_T033:6 Zm00001d025830_T011:6 Zm00001d025830_T009:1 Zm00001d025830_T061:6 Zm00001d025830_T029:6 Zm00001d025830_T023:6 Zm00001d025830_T048:6 Zm00001d025830_T071:6 Zm00001d025830_T047:6 Zm00001d025830_T062:6 Zm00001d025830_T038:6 Zm00001d025830_T043:6 Zm00001d025830_T081:6 Zm00001d025830_T002:6 Zm00001d025830_T045:4 Zm00001d025830_T072:6 Zm00001d025830_T018:3 Zm00001d025830_T060:5 Zm00001d025830_T051:6 Zm00001d025830_T067:4 Zm00001d025830_T052:6 Zm00001d025830_T040:6 Zm00001d025830_T035:4 Zm00001d025830_T034:6 Zm00001d025830_T082:6 Zm00001d025830_T064:1 Zm00001d025830_T026:6 Zm00001d025830_T003:6 Zm00001d025830_T014:6 Zm00001d025830_T044:6 Zm00001d025830_T017:6 Zm00001d025830_T005:6 Zm00001d025830_T030:6 Zm00001d025830_T053:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCAAAAATCAAGGCACTTCAGATTTTGGAGAATTTGAACTACTACTCTTGCGACAATGATTCTT
TTCACAAAAACAATGCACTTCATGTTTTCCTCCAACctttgtttaaaatgttctgcatacgttg
caccgttcaactcacttttagcatttgttccatccagaatggcatcaacgaagaaaaacaggtc
ggtgtggg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1524
Transcript exons: 131200671-131201092,131201178-131201452,131201533-131201
798,131201879-131202085,131202248-131202408,131202531-13
1202723
CTTTGTTTAAAATGTTCTGCATACGTTGCACCGTTCAACTCACTTTTAGCATTTGTTCCATCCA
GAATGGCATCAACGAAGAAAAACAGGTCGGTGTGGGGAGTATAGACCAAACTGCCAATCACATC
AGCTTTGTTGTATGTTCCACCAAGAAGCTTCAAAGACTCATTTGGTAAATATGAATCATGCAGA
GACAAACCCATTGGATCTTGAAATGCAGGTGATGATAAACACCGCTTTACTGCTGGCCAATCAA
TCATATTATCACCATAGAATTTCTGCTTGATGGGAAGTAAAAGGTAAAATGTTGAATCCATGTC
CAATGCACCATCATTCCCCAACAAAATATAAGATGGTGTGAACTCAGATCTATCCAGGAGAACT
TTCAAAAACATTTCTTGAAAATTGTGTGCGAGTATCATCTCTTCTTTGTTAAACTCAATCTTTC
CCAAATATTTAATTCCTGCTTTCACAATCCTCGCACGAGCAAGATGCAATTCAACATCCAACTT
TTCAGATTCCTCTGGAAGGCGATTGATCACAAAAAGACCAAACATCTGATATCGTCTATCTGCT
GGTATGGGAATAAATTCTATGTAATAGAAATGCAACTTAAACGAGGAGTCTAGTTTGCATCTTG
AAGGTCTCAGAACTGCAGGGATTAACATCTCATAAAGCTCTTCCCTAAAACTTTCATCATCGTC
TTTGTTGCTTTCTGAATTATTTGTTGTTGATACCTTAATCTTTCTAGAGCCTTGGCCAGGTAGA
AGAAAATCTGTCAAAGCACCGAGTTCATGAAGTTTGATGCATGCTTTCAAGCATGCATCTCTCT
TAGCTTCATCTTTCGATGGACAGGGTTGACCATTCACTTGACGGAAAGCAGCATTTGGTGGAAG
AATTAATTTGCATACTATTCCATCGACGTCATCAACAAAGAAGAATGATGGGGAAGGAACAAAA
AAAATATCTCTAGGAAGGTTATCACAGTAGCGATGTAATAGAGATACACTGCAAGCAGTGCTAA
TGGAAGCACCAGTATCATTGACTCGATAGATGTTCTCCTCAAGGCAATTGAACATATCATTTGA
TGTTCTCAAGTTAATCTCTTTATCCATAATGATTTCACCAGTAATATAATCATCAAGTAACTTC
TCCTGAGAATGATTTCCCCTCTCCAAGAGAAAAACATATTTCGATTTACTCATCCGGGCACGCC
CCCTTGATTGGATAAAGCTATTAACAGTTTCAGGGAGATCAAACCGCACAACAAGGCAGCAAGT
CTGAATATCAAGTCCCTCCTCACCTACACTAGTAGCAACCAAAAGGTTTACCTCACCCGAAGAG
AACTTTTCAATGATAGAACTCATCTTATCCCTTGACATATTCCTTAACCCCGAGTGGCATCCCA
CAAGAAACTCACATCTCCAAAAATCAAGGCACTTCAGATTTTGGAGAATTTGAACTACTACTCT
TGCGACAATGATTCTTTTCACAAAAACAATGCACTTCATGTTTTCCTCCAAC
						
					

						Genomic sequence
						
							CTTTGTTTAAAATGTTCTGCATACGTTGCACCGTTCAACTCACTTTTAGCATTTGTTCCATCCA
GAATGGCATCAACGAAGAAAAACAGGTCGGTGTGGGGAGTATAGACCAAACTGCCAATCACATC
AGCTTTGTTGTATGTTCCACCAAGAAGCTTCAAAGACTCATTTGGTAAATATGAATCATGCAGA
GACAAACCCATTGGATCTTGAAATGCAGGTGATGATAAACACCGCTTTACTGCTGGCCAATCAA
TCATATTATCACCATAGAATTTCTGCTTGATGGGAAGTAAAAGGTAAAATGTTGAATCCATGTC
CAATGCACCATCATTCCCCAACAAAATATAAGATGGTGTGAACTCAGATCTATCCAGGAGAACT
TTCAAAAACATTTCTTGAAAATTGTGTGCGAGTATCATCTGTAAGATAAAAGAAAAAAGACATG
TCAGGCATTGCTCCCTGAAAATTTTGTGTTGGCATCTGAACAGATAAGCAAGACAGTGCCTCTT
CTTTGTTAAACTCAATCTTTCCCAAATATTTAATTCCTGCTTTCACAATCCTCGCACGAGCAAG
ATGCAATTCAACATCCAACTTTTCAGATTCCTCTGGAAGGCGATTGATCACAAAAAGACCAAAC
ATCTGATATCGTCTATCTGCTGGTATGGGAATAAATTCTATGTAATAGAAATGCAACTTAAACG
AGGAGTCTAGTTTGCATCTTGAAGGTCTCAGAACTGCAGGGATTAACATCTCATAAAGCTCTTC
CCTAAAACTTTCATCTGAAAATGGAAAAAATATGTTTAAGCTAAATTACCAATATTTTCCGCAT
TATATTCTGAATAATGAACGATGACCATACCATCGTCTTTGTTGCTTTCTGAATTATTTGTTGT
TGATACCTTAATCTTTCTAGAGCCTTGGCCAGGTAGAAGAAAATCTGTCAAAGCACCGAGTTCA
TGAAGTTTGATGCATGCTTTCAAGCATGCATCTCTCTTAGCTTCATCTTTCGATGGACAGGGTT
GACCATTCACTTGACGGAAAGCAGCATTTGGTGGAAGAATTAATTTGCATACTATTCCATCGAC
GTCATCAACAAAGAAGAATGATGGGGAAGGAACAAAAAAACTGCAACAAGATGTATCAAATTAT
TCTAGGATATTCCCATGACACAAAATGGGTAGAATAATAAATGATCCTTTGCATACATATCTCT
AGGAAGGTTATCACAGTAGCGATGTAATAGAGATACACTGCAAGCAGTGCTAATGGAAGCACCA
GTATCATTGACTCGATAGATGTTCTCCTCAAGGCAATTGAACATATCATTTGATGTTCTCAAGT
TAATCTCTTTATCCATAATGATTTCACCAGTAATATAATCATCAAGTAACTTCTCCTGAGAATG
ATTTCCCCTAGTAAATATCAAAATGAAGAGCTTCAAGGTCTAGAACCAAAAACAAGGAACTAAA
TTCAAGGAAAATGTTAATAGCATTATGATAGGTTTGTGTAAATTAGAACAGTGTAATCGGTGAG
TGGGTGTGTGTGCTCATGTGGGTGGGTGTTACGAAAATGACCTCTCCAAGAGAAAAACATATTT
CGATTTACTCATCCGGGCACGCCCCCTTGATTGGATAAAGCTATTAACAGTTTCAGGGAGATCA
AACCGCACAACAAGGCAGCAAGTCTGAATATCAAGTCCCTCCTCACCTACACTAGTAGCAACCA
AAAGGTTTACCTGCAAAAAAAGTATTGAAAAAGGCTGTAACACAAGAAGCATAAACATATATAC
TGGTGTTAGTGGAGATAATAGATAAACCTGACAAGAACTATTAAGGATGGACAGACTTCAGATT
ATACCTCACCCGAAGAGAACTTTTCAATGATAGAACTCATCTTATCCCTTGACATATTCCTTAA
CCCCGAGTGGCATCCCACAAGAAACTCACATCTCCAAAAATCAAGGCACTTCAGATTTTGGAGA
ATTTGAACTACTACTCTTGCGACAATGATTCTTTTCACAAAAACAATGCACTTCATGTTTTCCT
CCAAC
						
					

			
		

Sequences
Splice junction sequence	CCAAAAATCAAGGCACTTCAGATTTTGGAGAATTTGAACTACTACTCTTGCGACAATGATTCTT TTCACAAAAACAATGCACTTCATGTTTTCCTCCAACctttgtttaaaatgttctgcatacgttg caccgttcaactcacttttagcatttgttccatccagaatggcatcaacgaagaaaaacaggtc ggtgtggg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1524 Transcript exons: 131200671-131201092,131201178-131201452,131201533-131201 798,131201879-131202085,131202248-131202408,131202531-13 1202723 CTTTGTTTAAAATGTTCTGCATACGTTGCACCGTTCAACTCACTTTTAGCATTTGTTCCATCCA GAATGGCATCAACGAAGAAAAACAGGTCGGTGTGGGGAGTATAGACCAAACTGCCAATCACATC AGCTTTGTTGTATGTTCCACCAAGAAGCTTCAAAGACTCATTTGGTAAATATGAATCATGCAGA GACAAACCCATTGGATCTTGAAATGCAGGTGATGATAAACACCGCTTTACTGCTGGCCAATCAA TCATATTATCACCATAGAATTTCTGCTTGATGGGAAGTAAAAGGTAAAATGTTGAATCCATGTC CAATGCACCATCATTCCCCAACAAAATATAAGATGGTGTGAACTCAGATCTATCCAGGAGAACT TTCAAAAACATTTCTTGAAAATTGTGTGCGAGTATCATCTCTTCTTTGTTAAACTCAATCTTTC CCAAATATTTAATTCCTGCTTTCACAATCCTCGCACGAGCAAGATGCAATTCAACATCCAACTT TTCAGATTCCTCTGGAAGGCGATTGATCACAAAAAGACCAAACATCTGATATCGTCTATCTGCT GGTATGGGAATAAATTCTATGTAATAGAAATGCAACTTAAACGAGGAGTCTAGTTTGCATCTTG AAGGTCTCAGAACTGCAGGGATTAACATCTCATAAAGCTCTTCCCTAAAACTTTCATCATCGTC TTTGTTGCTTTCTGAATTATTTGTTGTTGATACCTTAATCTTTCTAGAGCCTTGGCCAGGTAGA AGAAAATCTGTCAAAGCACCGAGTTCATGAAGTTTGATGCATGCTTTCAAGCATGCATCTCTCT TAGCTTCATCTTTCGATGGACAGGGTTGACCATTCACTTGACGGAAAGCAGCATTTGGTGGAAG AATTAATTTGCATACTATTCCATCGACGTCATCAACAAAGAAGAATGATGGGGAAGGAACAAAA AAAATATCTCTAGGAAGGTTATCACAGTAGCGATGTAATAGAGATACACTGCAAGCAGTGCTAA TGGAAGCACCAGTATCATTGACTCGATAGATGTTCTCCTCAAGGCAATTGAACATATCATTTGA TGTTCTCAAGTTAATCTCTTTATCCATAATGATTTCACCAGTAATATAATCATCAAGTAACTTC TCCTGAGAATGATTTCCCCTCTCCAAGAGAAAAACATATTTCGATTTACTCATCCGGGCACGCC CCCTTGATTGGATAAAGCTATTAACAGTTTCAGGGAGATCAAACCGCACAACAAGGCAGCAAGT CTGAATATCAAGTCCCTCCTCACCTACACTAGTAGCAACCAAAAGGTTTACCTCACCCGAAGAG AACTTTTCAATGATAGAACTCATCTTATCCCTTGACATATTCCTTAACCCCGAGTGGCATCCCA CAAGAAACTCACATCTCCAAAAATCAAGGCACTTCAGATTTTGGAGAATTTGAACTACTACTCT TGCGACAATGATTCTTTTCACAAAAACAATGCACTTCATGTTTTCCTCCAAC
Genomic sequence	CTTTGTTTAAAATGTTCTGCATACGTTGCACCGTTCAACTCACTTTTAGCATTTGTTCCATCCA GAATGGCATCAACGAAGAAAAACAGGTCGGTGTGGGGAGTATAGACCAAACTGCCAATCACATC AGCTTTGTTGTATGTTCCACCAAGAAGCTTCAAAGACTCATTTGGTAAATATGAATCATGCAGA GACAAACCCATTGGATCTTGAAATGCAGGTGATGATAAACACCGCTTTACTGCTGGCCAATCAA TCATATTATCACCATAGAATTTCTGCTTGATGGGAAGTAAAAGGTAAAATGTTGAATCCATGTC CAATGCACCATCATTCCCCAACAAAATATAAGATGGTGTGAACTCAGATCTATCCAGGAGAACT TTCAAAAACATTTCTTGAAAATTGTGTGCGAGTATCATCTGTAAGATAAAAGAAAAAAGACATG TCAGGCATTGCTCCCTGAAAATTTTGTGTTGGCATCTGAACAGATAAGCAAGACAGTGCCTCTT CTTTGTTAAACTCAATCTTTCCCAAATATTTAATTCCTGCTTTCACAATCCTCGCACGAGCAAG ATGCAATTCAACATCCAACTTTTCAGATTCCTCTGGAAGGCGATTGATCACAAAAAGACCAAAC ATCTGATATCGTCTATCTGCTGGTATGGGAATAAATTCTATGTAATAGAAATGCAACTTAAACG AGGAGTCTAGTTTGCATCTTGAAGGTCTCAGAACTGCAGGGATTAACATCTCATAAAGCTCTTC CCTAAAACTTTCATCTGAAAATGGAAAAAATATGTTTAAGCTAAATTACCAATATTTTCCGCAT TATATTCTGAATAATGAACGATGACCATACCATCGTCTTTGTTGCTTTCTGAATTATTTGTTGT TGATACCTTAATCTTTCTAGAGCCTTGGCCAGGTAGAAGAAAATCTGTCAAAGCACCGAGTTCA TGAAGTTTGATGCATGCTTTCAAGCATGCATCTCTCTTAGCTTCATCTTTCGATGGACAGGGTT GACCATTCACTTGACGGAAAGCAGCATTTGGTGGAAGAATTAATTTGCATACTATTCCATCGAC GTCATCAACAAAGAAGAATGATGGGGAAGGAACAAAAAAACTGCAACAAGATGTATCAAATTAT TCTAGGATATTCCCATGACACAAAATGGGTAGAATAATAAATGATCCTTTGCATACATATCTCT AGGAAGGTTATCACAGTAGCGATGTAATAGAGATACACTGCAAGCAGTGCTAATGGAAGCACCA GTATCATTGACTCGATAGATGTTCTCCTCAAGGCAATTGAACATATCATTTGATGTTCTCAAGT TAATCTCTTTATCCATAATGATTTCACCAGTAATATAATCATCAAGTAACTTCTCCTGAGAATG ATTTCCCCTAGTAAATATCAAAATGAAGAGCTTCAAGGTCTAGAACCAAAAACAAGGAACTAAA TTCAAGGAAAATGTTAATAGCATTATGATAGGTTTGTGTAAATTAGAACAGTGTAATCGGTGAG TGGGTGTGTGTGCTCATGTGGGTGGGTGTTACGAAAATGACCTCTCCAAGAGAAAAACATATTT CGATTTACTCATCCGGGCACGCCCCCTTGATTGGATAAAGCTATTAACAGTTTCAGGGAGATCA AACCGCACAACAAGGCAGCAAGTCTGAATATCAAGTCCCTCCTCACCTACACTAGTAGCAACCA AAAGGTTTACCTGCAAAAAAAGTATTGAAAAAGGCTGTAACACAAGAAGCATAAACATATATAC TGGTGTTAGTGGAGATAATAGATAAACCTGACAAGAACTATTAAGGATGGACAGACTTCAGATT ATACCTCACCCGAAGAGAACTTTTCAATGATAGAACTCATCTTATCCCTTGACATATTCCTTAA CCCCGAGTGGCATCCCACAAGAAACTCACATCTCCAAAAATCAAGGCACTTCAGATTTTGGAGA ATTTGAACTACTACTCTTGCGACAATGATTCTTTTCACAAAAACAATGCACTTCATGTTTTCCT CCAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.198757659

Conservation Information
Conserved circRNAs	NA
PMCS	0.198757659

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							131202680-131200775(+)
131202712-131200673(-)
						
					

						Potential amino acid sequence
						
							MILFTKTMHFMFSSNLCLKCSAYVAPFNSLLAFVPSRMASTKKNRSVWGV*(+)
MKCIVFVKRIIVARVVVQILQNLKCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFSSGEVNLL
VATSVGEEGLDIQTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNHSQEKLLDDYIT
GEIIMDKEINLRTSNDMFNCLEENIYRVNDTGASISTACSVSLLHRYCDNLPRDIFFVPSPSFF
FVDDVDGIVCKLILPPNAAFRQVNGQPCPSKDEAKRDACLKACIKLHELGALTDFLLPGQGSRK
IKVSTTNNSESNKDDDESFREELYEMLIPAVLRPSRCKLDSSFKLHFYYIEFIPIPADRRYQMF
GLFVINRLPEESEKLDVELHLARARIVKAGIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEF
TPSYILLGNDGALDMDSTFYLLLPIKQKFYGDNMIDWPAVKRCLSSPAFQDPMGLSLHDSYLPN
ESLKLLGGTYNKADVIGSLVYTPHTDLFFFVDAILDGTNAKSELNGATYAEHFKQRLEENMKCI
VFVKRIIVARVVVQILQNLKCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFSSGEVNLLVATS
VGEEGLDIQTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNHSQEKLLDDYITGEII
MDKEINLRTSNDMFNCLEENIYRVNDTGASISTACSVSLLHRYCDNLPRDIFFVPSPSFFFVDD
VDGIVCKLILPPNAAFRQVNGQPCPSKDEAKRDACLKACIKLHELGALTDFLLPGQGSRKIKVS
TTNNSESNKDDDESFREELYEMLIPAVLRPSRCKLDSSFKLHFYYIEFIPIPADRRYQMFGLFV
INRLPEESEKLDVELHLARARIVKAGIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEFTPSY
ILLGNDGALDMDSTFYLLLPIKQKFYGDNMIDWPAVKRCLSSPAFQDPMGLSLHDSYLPNESLK
LLGGTYNKADVIGSLVYTPHTDLFFFVDAILDGTNAKSELNGATYAEHFKQRLEENMKCIVFVK
RIIVARVVVQILQNLKCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFSSGEVNLLVATSVGEE
GLDIQTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNHSQEKLLDDYITGEIIMDKE
INLRTSNDMFNCLEENIYRVNDTGASISTACSVSLLHRYCDNLPRDIFFVPSPSFFFVDDVDGI
VCKLILPPNAAFRQVNGQPCPSKDEAKRDACLKACIKLHELGALTDFLLPGQGSRKIKVSTTNN
SESNKDDDESFREELYEMLIPAVLRPSRCKLDSSFKLHFYYIEFIPIPADRRYQMFGLFVINRL
PEESEKLDVELHLARARIVKAGIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEFTPSYILLG
NDGALDMDSTFYLLLPIKQKFYGDNMIDWPAVKRCLSSPAFQDPMGLSLHDSYLPNESLKLLGG
TYNKADVIGSLVYTPHTDLFFFVDAILDGTNAKSELNGATYAEHFKQRLEENMKCIVFVKRIIV
ARVVVQILQNLKCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFSSGEVNLLVATSVGEEGLDI
QTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNHSQEKLLDDYITGEIIMDKEINLR
TSNDMFNCLEENIYRVNDTGASISTACSVSLLHRYCDNLPRDIFFVPSPSFFFVDDVDGIVCKL
ILPPNAAFRQVNGQPCPSKDEAKRDACLKACIKLHELGALTDFLLPGQGSRKIKVSTTNNSESN
KDDDESFREELYEMLIPAVLRPSRCKLDSSFKLHFYYIEFIPIPADRRYQMFGLFVINRLPEES
EKLDVELHLARARIVKAGIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEFTPSYILLGNDGA
LDMDSTFYLLLPIKQKFYGDNMIDWPAVKRCLSSPAFQDPMGLSLHDSYLPNESLKLLGGTYNK
ADVIGSLVYTPHTDLFFFVDAILDGTNAKSELNGATYAEHFKQ(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	131202680-131200775(+) 131202712-131200673(-)
Potential amino acid sequence	MILFTKTMHFMFSSNLCLKCSAYVAPFNSLLAFVPSRMASTKKNRSVWGV*(+) MKCIVFVKRIIVARVVVQILQNLKCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFSSGEVNLL VATSVGEEGLDIQTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNHSQEKLLDDYIT GEIIMDKEINLRTSNDMFNCLEENIYRVNDTGASISTACSVSLLHRYCDNLPRDIFFVPSPSFF FVDDVDGIVCKLILPPNAAFRQVNGQPCPSKDEAKRDACLKACIKLHELGALTDFLLPGQGSRK IKVSTTNNSESNKDDDESFREELYEMLIPAVLRPSRCKLDSSFKLHFYYIEFIPIPADRRYQMF GLFVINRLPEESEKLDVELHLARARIVKAGIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEF TPSYILLGNDGALDMDSTFYLLLPIKQKFYGDNMIDWPAVKRCLSSPAFQDPMGLSLHDSYLPN ESLKLLGGTYNKADVIGSLVYTPHTDLFFFVDAILDGTNAKSELNGATYAEHFKQRLEENMKCI VFVKRIIVARVVVQILQNLKCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFSSGEVNLLVATS VGEEGLDIQTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNHSQEKLLDDYITGEII MDKEINLRTSNDMFNCLEENIYRVNDTGASISTACSVSLLHRYCDNLPRDIFFVPSPSFFFVDD VDGIVCKLILPPNAAFRQVNGQPCPSKDEAKRDACLKACIKLHELGALTDFLLPGQGSRKIKVS TTNNSESNKDDDESFREELYEMLIPAVLRPSRCKLDSSFKLHFYYIEFIPIPADRRYQMFGLFV INRLPEESEKLDVELHLARARIVKAGIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEFTPSY ILLGNDGALDMDSTFYLLLPIKQKFYGDNMIDWPAVKRCLSSPAFQDPMGLSLHDSYLPNESLK LLGGTYNKADVIGSLVYTPHTDLFFFVDAILDGTNAKSELNGATYAEHFKQRLEENMKCIVFVK RIIVARVVVQILQNLKCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFSSGEVNLLVATSVGEE GLDIQTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNHSQEKLLDDYITGEIIMDKE INLRTSNDMFNCLEENIYRVNDTGASISTACSVSLLHRYCDNLPRDIFFVPSPSFFFVDDVDGI VCKLILPPNAAFRQVNGQPCPSKDEAKRDACLKACIKLHELGALTDFLLPGQGSRKIKVSTTNN SESNKDDDESFREELYEMLIPAVLRPSRCKLDSSFKLHFYYIEFIPIPADRRYQMFGLFVINRL PEESEKLDVELHLARARIVKAGIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEFTPSYILLG NDGALDMDSTFYLLLPIKQKFYGDNMIDWPAVKRCLSSPAFQDPMGLSLHDSYLPNESLKLLGG TYNKADVIGSLVYTPHTDLFFFVDAILDGTNAKSELNGATYAEHFKQRLEENMKCIVFVKRIIV ARVVVQILQNLKCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFSSGEVNLLVATSVGEEGLDI QTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNHSQEKLLDDYITGEIIMDKEINLR TSNDMFNCLEENIYRVNDTGASISTACSVSLLHRYCDNLPRDIFFVPSPSFFFVDDVDGIVCKL ILPPNAAFRQVNGQPCPSKDEAKRDACLKACIKLHELGALTDFLLPGQGSRKIKVSTTNNSESN KDDDESFREELYEMLIPAVLRPSRCKLDSSFKLHFYYIEFIPIPADRRYQMFGLFVINRLPEES EKLDVELHLARARIVKAGIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEFTPSYILLGNDGA LDMDSTFYLLLPIKQKFYGDNMIDWPAVKRCLSSPAFQDPMGLSLHDSYLPNESLKLLGGTYNK ADVIGSLVYTPHTDLFFFVDAILDGTNAKSELNGATYAEHFKQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d025830_circ_g.4

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