Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Os10g0537500_circ_igg.1 |
ID in PlantcircBase | osa_circ_007840 |
Alias | Os10circ08899/Os_ciR515 |
Organism | Oryza sativa |
Position | chr10: 20940114-20940686 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | igg-circRNA |
Identification method | CIRI, SMALT, Segemehl, circRNA_finder, circseq_cup, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | NA |
Support reads | 2/67/6/3 |
Tissues | leaf and panicle/root/root/seed |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | NA |
Conservation Information | |
---|---|
Conserved circRNAs | osi_circ_008653 |
PMCS | 0.349294037 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Lu et al., 2015;Ye et al., 2015;Ye et al., 2016;Chu et al., 2017 |