Detail information of BGIOSGA033236_circ_g.2


General Information
CircRNA Name BGIOSGA033236_circ_g.2
ID in PlantcircBase osi_circ_008579
Alias Chr10:21640522_21640720(ZS97RS2)
Organism Oryza sativa ssp. indica
Position chr10: 18252011-18252209  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA033236
Parent gene annotation NA
Parent gene strand +
Alternative splicing NA
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   GT-CA
Number of exons covered BGIOSGA033236-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CAGAAGGGCCAGTTGGAAGAATTACTACAGAAGGCACAAGAAGATCTTGGATCAATCCAAGAAC
AACACCGAGTGAAGGTTCAACAGTTACTGACCTTAggaggaattcaagatgttgtcttcacaag
tttcctctgctttcagcgcaaatgaacagttgcttatgcaagctagaaaagaggctgcagagct
acagtta
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GGAGGAATTCAAGATGTTGTCTTCACAAGTTTCCTCTGCTTTCAGCGCAAATGAACAGTTGCTT
ATGCAAGCTAGAAAAGAGGCTGCAGAGCTACAGTTACAGAAGGGCCAGTTGGAAGAATTACTAC
AGAAGGCACAAGAAGATCTTGGATCAATCCAAGAACAACACCGAGTGAAGGTTCAACAGTTACT
GACCTTA
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021