Detail information of BGIOSGA014996_circ_g.1


General Information
CircRNA Name BGIOSGA014996_circ_g.1
ID in PlantcircBase osi_circ_005507
Alias 4:20597344|20597579
Organism Oryza sativa ssp. indica
Position chr4: 20597344-20597579  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA014996
Parent gene annotation NA
Parent gene strand -
Alternative splicing NA
Support reads NA
Tissues leaf
Exon boundary   No-No
Splicing signals   GT-AG
Number of exons covered BGIOSGA014996-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CGGGCACGAAGTAGTTGTCGGAGAGGAGCACCACCCAGCCGACGCGCCGCAGCGCGTCCTGCCC
GTCGTCGCAGAAGAAGCGCGGGTCGTTGGCGTTGCGgcgtggtaccgcgccaccatcccccaca
ccgtgttgctcgggtggagcaggtagcggccgaggtggtggaacgcggcgtcgcggcgcggcag
catccgcg
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GCGTGGTACCGCGCCACCATCCCCCACACCGTGTTGCTCGGGTGGAGCAGGTAGCGGCCGAGGT
GGTGGAACGCGGCGTCGCGGCGCGGCAGCATCCGCGACAGCGCGCGCTCGAACCGCGGGACCAG
GAACAGCCCGGGCACGAAGTAGTTGTCGGAGAGGAGCACCACCCAGCCGACGCGCCGCAGCGCG
TCCTGCCCGTCGTCGCAGAAGAAGCGCGGGTCGTTGGCGTTGCG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021