Detail information of BGIOSGA034304_circ_ig.2


General Information
CircRNA Name BGIOSGA034304_circ_ig.2
ID in PlantcircBase osi_circ_003070
Alias 11:5324822|5325503
Organism Oryza sativa ssp. indica
Position chr11: 5324822-5325503  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ig-circRNA
Identification method find_circ
Parent gene NA
Parent gene annotation NA
Parent gene strand NA
Alternative splicing BGIOSGA034304_circ_ig.1
Support reads NA
Tissues leaf
Exon boundary   NA-NA
Splicing signals   CT-AC
Number of exons covered NA
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GTCGTTGCCCTTCCCCCGCTGGATCCACTCGTCGCCGCCCAAGCTCCACCACCAGGGCCGGCGC
CGGCTCACCGCTCGCCGCCTCTTCCTGTGAGTGGATctagaatacccttaggaaaccctatcca
tccacccaaccctatacacatatctctctccttcctgcgcgagttgcggcggcggcatgtgatg
gtgtggcg
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CTAGAATACCCTTAGGAAACCCTATCCATCCACCCAACCCTATACACATATCTCTCTCCTTCCT
GCGCGAGTTGCGGCGGCGGCATGTGATGGTGTGGCGGCGGCGCCGAGGGGGCGGAGGGAGGGAG
CAGCGGGGGCAGCTCACGGAGGGGCGAGTTGTGGCGGCGGCACACGAAGGGGCGAGTTGCGGTG
GCGGCGCACGGAGGGGACGAGTGGCCGCGCCGGCTCGTGGAGGGAGGGAGGGAGTGGCGGCGGT
AGCTGAGGGGCGTGGAGGGAGTGGATCCATGCCAGCGCTGGCTTGTGGAGGGAGGAAGTGGATC
CACGCCGGCGCCGCCTTGTGGAGGGAGAGAGCTGCGGAGGGAGCGGATCCACGTTGACGCCGCC
TCATGGAGCGCGGCGGCGGCGGAGGGGCACGGAGGGAGCGCATCCATGCTGATGCCGCCTCGTG
GATGGAGGGAGCGACAGTGGCGGGCCCCTCCCTCCGTGCGGTCACTGCCCGAGCGCCGCGGGCC
GGATCCGCGGACCGCAGCTCGAGCTCCACCGCCCGGACCCGCCGCCGCCACTCCTCGTCGTCGC
CGAGCCGTCGTTGCCCTTCCCCCGCTGGATCCACTCGTCGCCGCCCAAGCTCCACCACCAGGGC
CGGCGCCGGCTCACCGCTCGCCGCCTCTTCCTGTGAGTGGAT
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021