Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os05g0579900_circ_g.3 |
ID in PlantcircBase | osa_circ_042197 |
Alias | NA |
Organism | Oryza sativa |
Position | chr5: 28870377-28870810 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | i-circRNA |
Identification method | CIRI-long |
Parent gene | Os05g0579900 |
Parent gene annotation |
Similar to 10A19I.11. (Os05t0579900-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os05t0579900-02) |
Parent gene strand | + |
Alternative splicing | Os05g0579900_circ_g.4 |
Support reads | NA |
Tissues | leaf |
Exon boundary | NA-NA |
Splicing signals | GT-AG |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.107718894 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | this study |