Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT2G47000_circ_g.2 |
ID in PlantcircBase | ath_circ_018771 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr2: 19310457-19314776 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | CIRCexplorer |
Parent gene | AT2G47000 |
Parent gene annotation |
ABC transporter B family member 4 |
Parent gene strand | - |
Alternative splicing | AT2G47000_circ_g.3 AT2G47000_circ_g.4 |
Support reads | 1 |
Tissues | root |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT2G47000.7:8 AT2G47000.6:10 AT2G47000.3:9 AT2G47000.4:9 AT2G47000.2:10 AT2G47000.5:10 AT2G47000.1:10 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.174052489 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | ath-miR854b |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |