Plant Circular RNA Database

Detail information of Solyc01g079720.2_circ_g.3

			
						 General Information
					
						CircRNA Name
						Solyc01g079720.2_circ_g.3
					
						ID in PlantcircBase
						sly_circ_000180
					
						Alias
						1:71341928|71346648
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr1: 78831122-78835842  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc01g079720.2						
					
						Parent gene annotation
						
							Protein phosphatase 2C 70
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Solyc01g079720.2_circ_g.1 Solyc01g079720.2_circ_g.2 Solyc01g079720.2_circ_g.4 						
					
						Support reads
						3
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc01g079720.2.1:4

General Information
CircRNA Name	Solyc01g079720.2_circ_g.3
ID in PlantcircBase	sly_circ_000180
Alias	1:71341928\|71346648
Organism	Solanum lycopersicum
Position	chr1: 78831122-78835842 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	CIRI
Parent gene	Solyc01g079720.2
Parent gene annotation	Protein phosphatase 2C 70
Parent gene strand	-
Alternative splicing	Solyc01g079720.2_circ_g.1 Solyc01g079720.2_circ_g.2 Solyc01g079720.2_circ_g.4
Support reads	3
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc01g079720.2.1:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGTTCTTCTGCTAACTGATTAAACACAAGTGGACGCTTAAGCGTCTGCCCAATAGAGATATCTT
CTGAAGTATCACAAACATCCAGAACAAAACTGTCGGcttatccgttcccggaagaggccaatgg
taatagcaaacatcttccataggcagcttctttcctcctcgacgtacggccatggcatctgatg
ctatacca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTATCCGTTCCCGGAAGAGGCCAATGGTAATAGCAAACATCTTCCATAGGCAGCTTCTTTCCT
CCTCGACGTACGGCCATGGCATCTGATGCTATACCAATCCCAAATGGGACATGATCATTTTGGG
ATCTAATATGTACCTGGAATCAAAAAATACATGACAATGAGCACCTGCATACACGCCTGCAATC
AAACACTAATTATTTGTTACCATTTTTTTTTAAGGTACTTGCAACCAATTTTCTATTTTGGTTT
GCCTGGGACTCTGGGAGACATGTAAGCTTTTCTGAAATGCCACCCATTTAAAAAATTTAATGAC
TTAAATTAAGCATTTCATGATTAATTCACCCTAATACACTAGGTTTTTTTAAAACAGGTGAACT
CCAATACACTAGTTTTTCCACCCAAATATTAACAGTAGGTGACTTAAAGGATCACGGTTGCTCA
TTGACACTTTCAAATTTCAAGTCTATACAAGTAAACACATGCTATACCAGAGTATTATTCATCT
TCCTACTACTTCTTCCCCCATCCAAAAGAACTAAAATGGGTTACAAAGGCAAACCCGACTAACT
TAGACCAGATTTAGGTATTGAATGATTTCTTTTTTATAATTGGTATTTAACAATTTACATTTTT
GATAATAAAAACAAGTAAAATTTGAGCTGTGTAAGAGGACATCCAAAAAAAGAAGCTAGAATCT
TAAAATATCAATTGCAAGTCAAAAGAGGATGGGTTCACTCTCCAAAATGTCAGTAGGTGAATCT
TCCTACAAGGAAGTTAGTTAAACTTGTTAGGAATCACTCCTTCCCGCTCTATCCTTAACTCATT
TGTTTCATTCAATAGGGCTTTTATTCCTCTATACAGTACAATCAACTTTCTGGAAATACCAGAT
ATTGCTTTTTATCAAAGAACATATACATATTACAAAATATTTTTTGGATAAACAGTGGTATCCA
CGTCAGCATTTGCACACACCTCGAGTAAATGGATATCTGCTACCTCTCAGCAATGATAACTATG
TGAACCAAGACTTGAGCAAATGCAAAAAATTCAACTAGTGTCGCCTCTGCTGGGATTAAAACCT
TGGTTCCAAGGCTGTGACTGCACTTCTTTGACCACTAGGATAAGTTAAGAGTAAGACAGACACA
GGCACTACAAGTTTAGCCAGCGAGATAAGAGTTTAGTTGAGGTGAGATCAAATATTGAGGTAGC
TAAATGTGAACATCTTTTCTAGGTTCAATGTTCCCAAAGAATGGAATGATGGATAAAGATGTTA
CACATAAGATTAAAGTAGGATGCTTGATATGTGTCTCAGAAGTATTTGGTGATCGGAAGAGTGA
ATGTTGGGGCTCTTAAGCTCATCACATCCACAAGATAAGTGTTGCAGAGATGCGAATACTCATA
TGGATATGTGGTCATACAAGATTAGATAAGATCATAAATGATCATATCCATATATGGTGCAACC
AACACATATAAATGAGAAAATTCTTGAGCTGGTTCAGCCACGTGTTACGTAGGCCTCTGGATGC
ACACGGGTTTCTTACATGTGAAAACATGATGATTAAGGTGTAAAAAGAGGACGCACTAGACCTA
AAATCACATGGAAAGAATTACCTCAACATATTTAGGTTTTCTCTAAATACAGGCAGATCGCAAA
ATCTAGAAAACAATGGAAGTTGAAATCCGTATATGTGATAACAACTAGAAGACTAGTGCTTATG
AGAAGACTCTTAGGGTGGGTTTGGTAAAGAGGGAACATGTTACAGCAAATGCTTTCCAACGTAT
GGTTCCAAACATTTTCTCTAGGCAAACAAGTTCCTTAAAATAAGGAAAGACTTCCCAAATGGAA
GTAGGGGAAACAAATCGCGCAAGTGCATTCCAAGTTTATTGTCTCCTCTCCACCCACCCAATAC
CCCTAACCCTCACCCCTTGATCATACTCCCCTACTGCCACCCCTGAACCCCCACTGCCCATCCC
TACCCACCTCCATAATGTTTTGATAGTTAACATAAAAAACTCTTGGATAATATTTTCTTGCTTA
CTTACCAAACACTAGATAATATGAAAAGAAAAAAAATACTTACTTTCCAAGAAAACAGTTTCTA
GGAAATCACTTTCCGTGAACATTTTCCTTCATACCAAACACACCCTAAGTATATTAAAGATATG
AGCACTGACTAGAGTATATTAGAGAACTCCAGAGTTGCACAATCTTTAAGTACTTAGCATAATA
TATTTTGGACCCAAACAGAGCATTTGTGATATCATTCATACGACTGACTGCATCTAGCTAGGGA
TTGAGGGGAAGTCCTTGTATTAGATCAACTTTTTATATTCAAAACCCATGCTAGGACTCATGCC
TTGCATTTGTATCATGCTAAAAGATTACTTAGATCCCTTCTGAAATCCTACTTTCTTATTCACC
TTGTCATGATTGGTTTCAACTCTCATTTAATCAGAGAGATCAAATTATTTATGTTTCAGTAAAA
TAAAGAGCAAACTGTAATTTCCATGATCAATCTGTAGCTTAATCCTTATTTTAATACCTATAGC
AGTTGGAAAATTCAACATTCTGTTCAAATGAAAAGAGCCAATTTGGTTTCTTCACGTGAAATAT
AGTTTTGGAAAAGAACTTAAAGGCTTCATCAACTTCTATAACCCTCCATACCTTTTTTAGTTGC
TCTTTGAAAACCCCGCACCCTACATCATACAAGTTTACCTGCACCCCCTGTAAATGAACTTCTC
AACTCGATACAAAAGCTGCTCAGATCACCACAAATTTGCAAGGGGTAGATTTAGACCAAGGAGA
TGGAGGGACAGAGCATGAGAGAAATGGTGGACGAATAGCATCAATAAGGGAAGTGATGGTGAGA
GCACAAAAATGGTCTTTCAAGGAGGCTATATATCTGGCAATTCTGCTTTGGAAGCTTATATGGA
AGGTTAAAATACCAGATAAACTGGTAGTTTTTACTTGGTTGGTGGTTAAAGAAGGTGTATTACA
CAAGAGAATCTTATGAAGAGGTGACCACAGATGTGCCCAAGATGTTTTTGTGAGCAGGGTGGTT
CGCCAGCTTTGGAATTTGTTTACTAGCTTCATAGGTATAAGTTGGACTGTTCCATAGAGAACAG
GACAGGCTCCAGAAAGCTGGAACAAGGAGGGCAGTAACAGCCCAGACAAGAGTAGATGGAAAAT
TGTCCCAGCAGTTATTTGGTGTACCATATGGAAAGAAAGGAATTCTAGGGAGTTCTGATAACAA
GAGCAGCCCTCTGCACAAGATTAAAATGACTGCATTATCACTTTTTACTATTGGTGTAGTTGAC
CCTGTGGCTATTGTAGACATTCTAGGGACCTTATAGTTTCTCTTTTCTTCTTTTCTTTTCTTTA
TCTTTTGTTTATGCCAGACACACACGTGTGGAGCGAGGATATGATCTAGATTCTTGGATACCAG
CATACCAGCTTTGAGCTGATGATAGATATGCAAATGTTACCTTTATCCAAAAAAAATATATATT
TGGCAATTCTTCTCCCTTTTTAGCTAAGTAATTACATCGACCAAAGAATTCAAATGTTATCATT
AGGCACTTTTTTCTTTATGGGGTGACACGGAGCATGCTAGAGCACGGGGTGTTCATTAGTGCCA
TTGAGTTTCACTTCTTGCTGGTGCTCCTTGACTGTAGGTATCCTTTGTTTTCATAGCAACTCCT
TGGTCATCAATTTTGCAACAAATAAATTCTAATAACTTTTCAAATAGCTAGCCTTGAATATAAC
TATAACATGGAAGTATACAAAGCAAAGATACTCTGTTAAAGTTGATGCCTTTATTTAGTGGGGA
GGATCACCAAGGAATTCTTTGTCTATTCATTCATTTATTTTGTGGGAGGGGGATGAGTCCATCA
TCAAATGAAGAACTTTAACATAGTGACAGCAGCACAAAGACCATTCACTTACAAATATTCTCGA
AGTTGTGCCAAGTGTTATTATGTCCCCATTTGCAAGCTCAATTGGATCGCCCCACTGTCTGCTC
CCAGAATGAGGATTATGCACAGCATTGGAATTTACTAGTGTGCCATTCAAGCTACCCATGTCAA
CCAGCTCCCACCTCAATTTCTGAAACAATAAAAGTGGAAAGTGTCTTCTATTTTATTTTCTTTT
GCAAATTCATAACTAAGAAACAATACAACACGTTAATAACATCTGCCAAGATCCATAAGAATCC
CTAATTTTCAATGGACATACATTTATATTCCAGTTTATCATAGCATGCTTGCCAGAAACCTCTG
AATCCATCACCAAGATATCACTAGGTGTCACTCTTCCAAGAGTAAGTGGAAGCCTAGATGTATC
TGTTGACTGCATGGAATGTTGAAGACCTTGACAGGGTCCTGAGATAACCTCCAGCATGAGGATG
CTTCCTGCACTTCTAAAAGGAAAATATGATGACACTATTTACACACGCTTCCAATCAAAAGAGT
GTAAAGAACATCAAGCACTTGTCACAGTGATAGAAGAAATTACTTTGATCTTTTGTATCTTTAG
GAGCAAAATCTCCGAACTTCTCGTTCTGTATTGCCAAATTCGGTCTGTACTTTACATCCTCTGG
TCTGATGTGTTTCTGTTCTTCTGCTAACTGATTAAACACAAGTGGACGCTTAAGCGTCTGCCCA
ATAGAGATATCTTCTGAAGTATCACAAACATCCAGAACAAAACTGTCGG
						
					

			
		

Sequences
Splice junction sequence	TGTTCTTCTGCTAACTGATTAAACACAAGTGGACGCTTAAGCGTCTGCCCAATAGAGATATCTT CTGAAGTATCACAAACATCCAGAACAAAACTGTCGGcttatccgttcccggaagaggccaatgg taatagcaaacatcttccataggcagcttctttcctcctcgacgtacggccatggcatctgatg ctatacca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTATCCGTTCCCGGAAGAGGCCAATGGTAATAGCAAACATCTTCCATAGGCAGCTTCTTTCCT CCTCGACGTACGGCCATGGCATCTGATGCTATACCAATCCCAAATGGGACATGATCATTTTGGG ATCTAATATGTACCTGGAATCAAAAAATACATGACAATGAGCACCTGCATACACGCCTGCAATC AAACACTAATTATTTGTTACCATTTTTTTTTAAGGTACTTGCAACCAATTTTCTATTTTGGTTT GCCTGGGACTCTGGGAGACATGTAAGCTTTTCTGAAATGCCACCCATTTAAAAAATTTAATGAC TTAAATTAAGCATTTCATGATTAATTCACCCTAATACACTAGGTTTTTTTAAAACAGGTGAACT CCAATACACTAGTTTTTCCACCCAAATATTAACAGTAGGTGACTTAAAGGATCACGGTTGCTCA TTGACACTTTCAAATTTCAAGTCTATACAAGTAAACACATGCTATACCAGAGTATTATTCATCT TCCTACTACTTCTTCCCCCATCCAAAAGAACTAAAATGGGTTACAAAGGCAAACCCGACTAACT TAGACCAGATTTAGGTATTGAATGATTTCTTTTTTATAATTGGTATTTAACAATTTACATTTTT GATAATAAAAACAAGTAAAATTTGAGCTGTGTAAGAGGACATCCAAAAAAAGAAGCTAGAATCT TAAAATATCAATTGCAAGTCAAAAGAGGATGGGTTCACTCTCCAAAATGTCAGTAGGTGAATCT TCCTACAAGGAAGTTAGTTAAACTTGTTAGGAATCACTCCTTCCCGCTCTATCCTTAACTCATT TGTTTCATTCAATAGGGCTTTTATTCCTCTATACAGTACAATCAACTTTCTGGAAATACCAGAT ATTGCTTTTTATCAAAGAACATATACATATTACAAAATATTTTTTGGATAAACAGTGGTATCCA CGTCAGCATTTGCACACACCTCGAGTAAATGGATATCTGCTACCTCTCAGCAATGATAACTATG TGAACCAAGACTTGAGCAAATGCAAAAAATTCAACTAGTGTCGCCTCTGCTGGGATTAAAACCT TGGTTCCAAGGCTGTGACTGCACTTCTTTGACCACTAGGATAAGTTAAGAGTAAGACAGACACA GGCACTACAAGTTTAGCCAGCGAGATAAGAGTTTAGTTGAGGTGAGATCAAATATTGAGGTAGC TAAATGTGAACATCTTTTCTAGGTTCAATGTTCCCAAAGAATGGAATGATGGATAAAGATGTTA CACATAAGATTAAAGTAGGATGCTTGATATGTGTCTCAGAAGTATTTGGTGATCGGAAGAGTGA ATGTTGGGGCTCTTAAGCTCATCACATCCACAAGATAAGTGTTGCAGAGATGCGAATACTCATA TGGATATGTGGTCATACAAGATTAGATAAGATCATAAATGATCATATCCATATATGGTGCAACC AACACATATAAATGAGAAAATTCTTGAGCTGGTTCAGCCACGTGTTACGTAGGCCTCTGGATGC ACACGGGTTTCTTACATGTGAAAACATGATGATTAAGGTGTAAAAAGAGGACGCACTAGACCTA AAATCACATGGAAAGAATTACCTCAACATATTTAGGTTTTCTCTAAATACAGGCAGATCGCAAA ATCTAGAAAACAATGGAAGTTGAAATCCGTATATGTGATAACAACTAGAAGACTAGTGCTTATG AGAAGACTCTTAGGGTGGGTTTGGTAAAGAGGGAACATGTTACAGCAAATGCTTTCCAACGTAT GGTTCCAAACATTTTCTCTAGGCAAACAAGTTCCTTAAAATAAGGAAAGACTTCCCAAATGGAA GTAGGGGAAACAAATCGCGCAAGTGCATTCCAAGTTTATTGTCTCCTCTCCACCCACCCAATAC CCCTAACCCTCACCCCTTGATCATACTCCCCTACTGCCACCCCTGAACCCCCACTGCCCATCCC TACCCACCTCCATAATGTTTTGATAGTTAACATAAAAAACTCTTGGATAATATTTTCTTGCTTA CTTACCAAACACTAGATAATATGAAAAGAAAAAAAATACTTACTTTCCAAGAAAACAGTTTCTA GGAAATCACTTTCCGTGAACATTTTCCTTCATACCAAACACACCCTAAGTATATTAAAGATATG AGCACTGACTAGAGTATATTAGAGAACTCCAGAGTTGCACAATCTTTAAGTACTTAGCATAATA TATTTTGGACCCAAACAGAGCATTTGTGATATCATTCATACGACTGACTGCATCTAGCTAGGGA TTGAGGGGAAGTCCTTGTATTAGATCAACTTTTTATATTCAAAACCCATGCTAGGACTCATGCC TTGCATTTGTATCATGCTAAAAGATTACTTAGATCCCTTCTGAAATCCTACTTTCTTATTCACC TTGTCATGATTGGTTTCAACTCTCATTTAATCAGAGAGATCAAATTATTTATGTTTCAGTAAAA TAAAGAGCAAACTGTAATTTCCATGATCAATCTGTAGCTTAATCCTTATTTTAATACCTATAGC AGTTGGAAAATTCAACATTCTGTTCAAATGAAAAGAGCCAATTTGGTTTCTTCACGTGAAATAT AGTTTTGGAAAAGAACTTAAAGGCTTCATCAACTTCTATAACCCTCCATACCTTTTTTAGTTGC TCTTTGAAAACCCCGCACCCTACATCATACAAGTTTACCTGCACCCCCTGTAAATGAACTTCTC AACTCGATACAAAAGCTGCTCAGATCACCACAAATTTGCAAGGGGTAGATTTAGACCAAGGAGA TGGAGGGACAGAGCATGAGAGAAATGGTGGACGAATAGCATCAATAAGGGAAGTGATGGTGAGA GCACAAAAATGGTCTTTCAAGGAGGCTATATATCTGGCAATTCTGCTTTGGAAGCTTATATGGA AGGTTAAAATACCAGATAAACTGGTAGTTTTTACTTGGTTGGTGGTTAAAGAAGGTGTATTACA CAAGAGAATCTTATGAAGAGGTGACCACAGATGTGCCCAAGATGTTTTTGTGAGCAGGGTGGTT CGCCAGCTTTGGAATTTGTTTACTAGCTTCATAGGTATAAGTTGGACTGTTCCATAGAGAACAG GACAGGCTCCAGAAAGCTGGAACAAGGAGGGCAGTAACAGCCCAGACAAGAGTAGATGGAAAAT TGTCCCAGCAGTTATTTGGTGTACCATATGGAAAGAAAGGAATTCTAGGGAGTTCTGATAACAA GAGCAGCCCTCTGCACAAGATTAAAATGACTGCATTATCACTTTTTACTATTGGTGTAGTTGAC CCTGTGGCTATTGTAGACATTCTAGGGACCTTATAGTTTCTCTTTTCTTCTTTTCTTTTCTTTA TCTTTTGTTTATGCCAGACACACACGTGTGGAGCGAGGATATGATCTAGATTCTTGGATACCAG CATACCAGCTTTGAGCTGATGATAGATATGCAAATGTTACCTTTATCCAAAAAAAATATATATT TGGCAATTCTTCTCCCTTTTTAGCTAAGTAATTACATCGACCAAAGAATTCAAATGTTATCATT AGGCACTTTTTTCTTTATGGGGTGACACGGAGCATGCTAGAGCACGGGGTGTTCATTAGTGCCA TTGAGTTTCACTTCTTGCTGGTGCTCCTTGACTGTAGGTATCCTTTGTTTTCATAGCAACTCCT TGGTCATCAATTTTGCAACAAATAAATTCTAATAACTTTTCAAATAGCTAGCCTTGAATATAAC TATAACATGGAAGTATACAAAGCAAAGATACTCTGTTAAAGTTGATGCCTTTATTTAGTGGGGA GGATCACCAAGGAATTCTTTGTCTATTCATTCATTTATTTTGTGGGAGGGGGATGAGTCCATCA TCAAATGAAGAACTTTAACATAGTGACAGCAGCACAAAGACCATTCACTTACAAATATTCTCGA AGTTGTGCCAAGTGTTATTATGTCCCCATTTGCAAGCTCAATTGGATCGCCCCACTGTCTGCTC CCAGAATGAGGATTATGCACAGCATTGGAATTTACTAGTGTGCCATTCAAGCTACCCATGTCAA CCAGCTCCCACCTCAATTTCTGAAACAATAAAAGTGGAAAGTGTCTTCTATTTTATTTTCTTTT GCAAATTCATAACTAAGAAACAATACAACACGTTAATAACATCTGCCAAGATCCATAAGAATCC CTAATTTTCAATGGACATACATTTATATTCCAGTTTATCATAGCATGCTTGCCAGAAACCTCTG AATCCATCACCAAGATATCACTAGGTGTCACTCTTCCAAGAGTAAGTGGAAGCCTAGATGTATC TGTTGACTGCATGGAATGTTGAAGACCTTGACAGGGTCCTGAGATAACCTCCAGCATGAGGATG CTTCCTGCACTTCTAAAAGGAAAATATGATGACACTATTTACACACGCTTCCAATCAAAAGAGT GTAAAGAACATCAAGCACTTGTCACAGTGATAGAAGAAATTACTTTGATCTTTTGTATCTTTAG GAGCAAAATCTCCGAACTTCTCGTTCTGTATTGCCAAATTCGGTCTGTACTTTACATCCTCTGG TCTGATGTGTTTCTGTTCTTCTGCTAACTGATTAAACACAAGTGGACGCTTAAGCGTCTGCCCA ATAGAGATATCTTCTGAAGTATCACAAACATCCAGAACAAAACTGTCGG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.124035148

Conservation Information
Conserved circRNAs	NA
PMCS	0.124035148

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							78831209-78835817(-)
78835532-78835755(-)
						
						Potential amino acid sequence
						
							MPWPYVEEERSCLWKMFAITIGLFRERISRQFCSGCL*(-)
MLEVISGPCQGLQHSMQSTDTSRLPLTLGRVTPSDILVMDSEVSGKHAMINWNINKLRWELVDM
GSLNGTLVNSNAVHNPHSGSRQWGDPIELANGDIITLGTTSRIFVHIRSQNDHVPFGIGIASDA
MAVRRGGKKLPMEDVCYYHWPLPGTDKPTVLFWMFVILQKISLLGRRLSVHLCLIS*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						fruit ripening

Functional Information
Coding potential	Y
Potential coding position	78831209-78835817(-) 78835532-78835755(-)
Potential amino acid sequence	MPWPYVEEERSCLWKMFAITIGLFRERISRQFCSGCL(-) MLEVISGPCQGLQHSMQSTDTSRLPLTLGRVTPSDILVMDSEVSGKHAMINWNINKLRWELVDM GSLNGTLVNSNAVHNPHSGSRQWGDPIELANGDIITLGTTSRIFVHIRSQNDHVPFGIGIASDA MAVRRGGKKLPMEDVCYYHWPLPGTDKPTVLFWMFVILQKISLLGRRLSVHLCLIS(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	fruit ripening

			
						 Other Information
					
						References
						Yin et al., 2018

circRNA

Detail information of Solyc01g079720.2_circ_g.3

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