Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d048424_circ_g.1 |
ID in PlantcircBase | zma_circ_010104 |
Alias | zma_circ_0003134 |
Organism | Zea mays |
Position | chr9: 155994401-155994658 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d048424 |
Parent gene annotation |
evolutionarily conserved C-terminal region 2 |
Parent gene strand | - |
Alternative splicing | Zm00001d048424_circ_g.2 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d048424_T003:1 Zm00001d048424_T019:1 Zm00001d048424_T012:2 Zm00001d048424_T001:1 Zm00001d048424_T014:1 Zm00001d048424_T013:1 Zm00001d048424_T006:1 Zm00001d048424_T011:1 Zm00001d048424_T009:1 Zm00001d048424_T016:1 Zm00001d048424_T008:1 Zm00001d048424_T007:1 Zm00001d048424_T017:1 Zm00001d048424_T002:1 Zm00001d048424_T010:1 Zm00001d048424_T005:1 Zm00001d048424_T015:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.097221964 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |