Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G17580_circ_g.1 |
ID in PlantcircBase | ath_circ_003099 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 6039835-6042207 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, PcircRNA_finder |
Parent gene | AT1G17580 |
Parent gene annotation |
Myosin-5 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G17580.1:8 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.162712808 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |