Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d018657_circ_g.1 |
ID in PlantcircBase | zma_circ_009200 |
Alias | zma_circ_0002699, GRMZM2G018926_C2 |
Organism | Zea mays |
Position | chr7: 2069542-2070656 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ, CIRI2 |
Parent gene | Zm00001d018657 |
Parent gene annotation |
PHD finger family protein |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d018657_T029:5 Zm00001d018657_T056:5 Zm00001d018657_T053:3 Zm00001d018657_T024:5 Zm00001d018657_T002:5 Zm00001d018657_T009:5 Zm00001d018657_T049:5 Zm00001d018657_T031:5 Zm00001d018657_T004:5 Zm00001d018657_T015:5 Zm00001d018657_T044:3 Zm00001d018657_T036:4 Zm00001d018657_T012:4 Zm00001d018657_T001:5 Zm00001d018657_T037:5 Zm00001d018657_T021:5 Zm00001d018657_T057:5 Zm00001d018657_T008:5 Zm00001d018657_T014:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.166906474 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to drought stress |
Other Information | |
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References | Ma et al., 2021b;Zhang et al., 2019 |