Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d052840_circ_g.1 |
| ID in PlantcircBase | zma_circ_001802 |
| Alias | circ823 |
| Organism | Zea mays |
| Position | chr4: 202386503-202390539 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | u-circRNA |
| Identification method | CIRI |
| Parent gene | Zm00001d052840 |
| Parent gene annotation |
Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 |
| Parent gene strand | + |
| Alternative splicing | NA |
| Support reads | 5 |
| Tissues | seedling leaves |
| Exon boundary | No-Yes |
| Splicing signals | GT-CA |
| Number of exons covered | Zm00001d052840_T018:13 Zm00001d052840_T020:4 Zm00001d052840_T008:13 Zm00001d052840_T012:11 Zm00001d052840_T003:12 Zm00001d052840_T004:13 Zm00001d052840_T013:12 Zm00001d052840_T006:13 Zm00001d052840_T001:13 Zm00001d052840_T010:13 Zm00001d052840_T015:12 Zm00001d052840_T009:9 Zm00001d052840_T007:13 Zm00001d052840_T005:13 Zm00001d052840_T023:9 Zm00001d052840_T011:13 Zm00001d052840_T016:13 Zm00001d052840_T019:13 Zm00001d052840_T021:13 Zm00001d052840_T002:12 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.02997237 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chen et al., 2017b |