Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G20910_circ_g.3 |
ID in PlantcircBase | ath_circ_003683 |
Alias | 1:7279041-7280650 |
Organism | Arabidpsis thaliana |
Position | chr1: 7279041-7280650 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G20910 |
Parent gene annotation |
AT-rich interactive domain-containing protein 6 |
Parent gene strand | - |
Alternative splicing | AT1G20910_circ_g.1 AT1G20910_circ_g.2 AT1G20910_circ_g.4 AT1G20910_circ_g.5 |
Support reads | 2 |
Tissues | root |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G20910.1:6 AT1G20910.2:6 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.111306532 |
Functional Information | |
---|---|
Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Philips et al., 2020 |