Plant Circular RNA Database

Detail information of Zm00001d013358_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d013358_circ_g.2
					
						ID in PlantcircBase
						zma_circ_008384
					
						Alias
						zma_circ_0002260
					
						Organism
						
							Zea mays						
					
						Position
						
							chr5: 9528433-9533412  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d013358						
					
						Parent gene annotation
						
							DEAD-box ATP-dependent RNA helicase 16
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d013358_circ_g.3 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d013358_T019:7
Zm00001d013358_T008:5
Zm00001d013358_T014:7
Zm00001d013358_T006:6
Zm00001d013358_T016:6
Zm00001d013358_T003:9
Zm00001d013358_T001:4
Zm00001d013358_T018:6
Zm00001d013358_T020:2
Zm00001d013358_T004:6
Zm00001d013358_T013:5
Zm00001d013358_T002:8
Zm00001d013358_T012:7
Zm00001d013358_T010:8
Zm00001d013358_T015:8
Zm00001d013358_T017:7
Zm00001d013358_T005:9
Zm00001d013358_T009:8

General Information
CircRNA Name	Zm00001d013358_circ_g.2
ID in PlantcircBase	zma_circ_008384
Alias	zma_circ_0002260
Organism	Zea mays
Position	chr5: 9528433-9533412 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d013358
Parent gene annotation	DEAD-box ATP-dependent RNA helicase 16
Parent gene strand	-
Alternative splicing	Zm00001d013358_circ_g.3
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d013358_T019:7 Zm00001d013358_T008:5 Zm00001d013358_T014:7 Zm00001d013358_T006:6 Zm00001d013358_T016:6 Zm00001d013358_T003:9 Zm00001d013358_T001:4 Zm00001d013358_T018:6 Zm00001d013358_T020:2 Zm00001d013358_T004:6 Zm00001d013358_T013:5 Zm00001d013358_T002:8 Zm00001d013358_T012:7 Zm00001d013358_T010:8 Zm00001d013358_T015:8 Zm00001d013358_T017:7 Zm00001d013358_T005:9 Zm00001d013358_T009:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTTCTGAGGACAACTTCAGTAGCTCGTGCAGAAGTGGGAGAAGATAGGCAAAGGTCTTCCCAGA
GCCAGTCTTGGCCTTTGCAACCACATCCTTCCCTTCtgtaaatacatttttgaagtcaattcct
ctgacaactccaaattcagcatctaaagtctgttgcaaatgtttgcgggacaccttttgctctt
tctggttt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TGTAAATACATTTTTGAAGTCAATTCCTCTGACAACTCCAAATTCAGCATCTAAAGTCTGTTGC
AAATGTTTGCGGGACACCTTTTGCTCTTTCTGGTTTTCCTTATTGGTTTGCTTCTTCCGTTTGC
GGGACAATGTTGCCTCTTTTTTATTTTCCTCATTGGTTTGCTTCTCCTTTGTTTTAGTGTCATC
CGTTGCTATTAGATAATCAAATAGCCTTGCGTTGAATGCCTAAAAAGAAATACACAAACAATTT
AAATTATTTCTGGAGCCACCTTGTCATCACAAGCAATCTGTGCAAACTTCTAGCAAATGATTTG
ATATCAAAGTCTTAAATATTGTTTAACAGGTAACCTTCCATACCAATGGCTTTTTTCTGTTTCT
CAACAAAAGGGGTCCAAGACTAAACCAAAGCACAGGAAAGATATTGCTATTCACGTAATAGAGG
CATATACTAGTCAATATTAAGAAACAAAGAAAAATGGCAGAGTTTTAGAGACGAGTGCCTTCAC
AAAGCACAATTACATAATTAACAAGCAATCTAAGGAGCTAAAGGGAACCTAGCTCAGGGGTTCA
TGCAACAACCAAGTTGTTTGCTTCATCTATCCATTTATTAAGTTCTTTATAATTACAAATAAGA
AGTGTAGGCCTGATGCAGTGGTGAGAGCTGTCTAACTAAGTCATCTGGTCATGGGTTCAAAGCA
GCCTCTCCGCATTTGCAGGGGGAGACTCATGTGGAAGCCTCGGTCTAACCTTTTTTCATAGTTA
CAAATAATTTGATAAAAGCCGTGCAAAAAAGATACCTCTATAATATGTAGTCGGGAATTTTGTG
GCAACTCAGCATTCAAAACTGCAGATCTTATCCCAAACTGCAAAAAGCAGAGCATATTCATCAT
AAGTATGTTAATACTACAAATGAAGCATACATTAAAAATAGAATCGAAATAGAAGCAACATAGT
ATGTGAACAAAAGCAGTTAAGTGAATAGTGTACACATAGAAACAATCATAGCATAGGCAAAGTT
TGTATAGCATTATCCAAAAATGGCAGTACAAGATGTCGCATTATCCAAGGTGAGTGTGGTGTTG
TATGGGAGGTTCTTGCCCCCTTTGGTCTTCTTAACATAATAATACACAACTCTCCAGCATGTTC
GAGAAAAAAGATGTAGCGCCAATCCTTCAGTTAATTTTTTACAAGACTTGCCTAACCTGGTATT
ATGGTTATCTGAAGAGACAAATGAACTTAATGACATAGCAAGAGAGTCAACTGTGACATGATTG
TATGCTCAACTTTATAACATCAAATACAGAAGGAACAAAGTAGGTCACAAGGTCAATAATTGCA
GCATATAAAGTCCAGGTTATCTCAAACCAGAATTCTAAGAATCAAACAATTCAGGATATGTACA
AGTTTTTTAAGGTGTCGAGTAAAATAAAATACCTTTTTATAGATCCAGATGATCAATCACGTTG
TAAGGGTAATAACACAAAGCAGTGGTTTGATTTACCTTTTCCAAGATCAGTCGTAATCTGAAAG
CCATATCAATTGAGTTTACAAATATAAGAACTTTCTTCTGAATGAGCTCAAACTTTAGAAGTGC
AAGGATATGAAGTATTTTATCCTTGGCATCACAGGAGATCTGTGGGCAAAAAATGAATGATATG
CGATGAGCAGGAATGAAGAAATAGCAGTGTAAAAAGCCAAGTAACTTCAGCAAAATGAATACGA
TTTTTTAAAATACGCCCATAGCTTAAGGATGACCTCAGATAAGGGACGGTCAGGAAAATGTAAC
CCTGTCAAGCATGAGAACTTTTGGTTTTCCAGTTTTTTTTTTTGGAACCTTCAAGTTGCAATGG
TAATATGAAAAGGAGCACAAGTACAGGAAGGAGGAAGCAGAAGATACTTGCCCAAAACTGCTGA
ACATTTTTGGGGATCACATCATCCTTTGCTTGACCAACCTCCGAAAGAGTTAGAACAAATGGGT
TATGCAGAAGTAGTTTTGTCAACTTGTCAACATCAGAGCTGCCATATAGTCAAATTTCAGTATC
ACCAAAAATAACACAAATGCAAGCAAGGGCCCAAGTTACTAATGATATTTCTTAGCAAGGGCCT
AAGTGGGAAACAGTAGCATGAATTCAATCCCCAACACTTACATGTCAGATGCATTCAAACAATT
ATTAAACTATCAGCATAGACACATAAAGAGAAGCAACAGCACAAACAGGTCTAACAGCAACCAC
CCACTTAACCAGCATGATAAAAATTTGGAAATAGAAAAAAAACAGAATTTCAAGAGCAAACCAT
CTGAGGCAAGTAATTATAAAATAATGAAATGCTTAGATAAATCATAAATGTAGGGTGCAGAATC
GAGATTTAATGGGTAGCTGCAGAAAAAGGACGAACATTGACCAGATTTAACCTTGAAGTTGCAG
ACATCAGAATAGACTGACAGCTTCTCGGGATATGTGGGATGAGAGCTTTCAAGTCAACTTCGCA
GCGGTAGGATAGAAGTAGGTCAGCCTGGCAACTAAAGATTGGTATATTAGTAACTTCTTCAAAA
AGGAACTTGCGTGATGAACATTGTAATTAATACACAATAGGTGTGGATTCTGGTGTACATCACT
TCAAAAAATGTTGTACTCCCTCCCTCAACCTTCTAAGGCATATTTTGATGCAAAAAAGTTGTAA
TTTTGACCAACTGTTGTCAAATTAAATGTATGTTTTGAAGTCATATTAATACATTCATATTTTT
GAAGTGTTTTGTAGTAATTGAAAATATACTGTGAAAAGAATTCAAAGGTTCAAATATGATTTTG
AAAACTTTACATACCAAAGTATACCCTACAATAATAAACAGAAGGCTCATATGGCAATGCAGCT
TTAAATAAAGTGTCACCAGATATGTAAAGTATGATCTCCAAGTCTTTAAAATGGTACAAATCAA
ATTGTTTTCGAGTCAAGAGTCAAGTCGTGCAACTACTGACTAGACGACCAGTCGTGACTAGTCG
AATATAAGTCGATGATTATATTTTTTATATTTTTCTATATATGCTAATACTAAAAACATGCTGA
AACACTAAAAACACTTTGTTTAGTATATCTTCATCCATCTCTATTTCCTACAATATATCATTAA
ATATTGAACAGTTTTGTAGCGAGTCTCCTATTGTTCTCTCTGATTTCAAAGAACTTGCTTGGAT
TCAAAAACAGTGCATGCCCCATAAAGATTGGTAGTCATCTGACTGTCCCACCTCTTACCAACAA
TAGAAATTACTTCATCAATTAGTCGCTCTTTGTGTTCCGAAGCTTCCTTGATGCTCTTTTTTTA
TAGTCCATGGCGGCCCACATTTCAGCCATTGCTGGTCTCTACCATTTCAGCCTAACAAGATCTC
TACCATTTGTCTTGGTCCTCATCAAGTCTTAAATCCTTCCTTGTCCATTGATCAACCTGGTCAT
CTTCTTTGCTTTAGCAATGCAGCCACTAAACTCTTTTATCTTCCCAATAACCTCCAGCATGAGA
TCCAAGTAGTAGGTAGCACAAGGTGTCCAAAATAAGGTAGGAAACTTACTAGGGTTTGAGATGG
TTGGGTGGGTTCACATTTTTATACCTAGGCCCAAATAAGTCGCCCGACTCAAATGCTATGACTA
GTCGACGAGTCGAGCGACTAGCAGAGAAAGTCGAGTCGTCCGACTAGCAGAGAAAGTCGAGTCG
CTCGACTTTAAAACCTTGAATCAAAATCACCATATGCAAATACATGGGGAAAAATTAAACTATA
GCTCAATTAAGAAAAATGGAATAACAGAAATTTCTTTTTATTATTTTATTAGACTGTGACAGAA
AATATAGCATCACAAATTCAACGCTAGCATTCTTCTTTACATTGCAGGGCCAATGAAATATGTA
AACAAAATGAAAGTAAACAAAAATATATATATGAACGACAACTGGAGAGCACCTCATCAAGAAT
CATCATTGAAAGTGACTCTTTAACTGCAGGTCCACGAATAATTCCCTTTGATATGCATGTTGCA
ACACAAGCTGGAGTTGATACGAGAATGTTAGGGGGGCCAGACAATGCAACAGTCTGCAAAAAAC
AGGCAAAAGTAAGTTAGTTACTTGAGACAATAGACATAATAATAATAATAATAACAAAACATGG
GTAACAAGTGGAGAAAATAACAATGGAACAGAATAGAATTCTCACAATATCCTTATCCGACATG
CTCGCGGTAACTTGCACAACCCTCAATTTGCATGTACAGAGCTCAAGGAGAGATAATGCCTCAT
TATACACCTATATCAAGCAAGTCGAGACAGCAGTGTTAGCTTCCTGTTTAGCAAAGATGAAAAC
AAGGGGAAGGAAAATTATATCATACCCACATGATATTAATAGCCAGCAAATTAAAAATACATCA
AAATAGTGAATATAAAAACATGTGTTTGCACTTCACTTGTCCAATGGGGAATCTCCATCTGTGC
ACCACCTGATGTGCATTTTTCACCTATACCACTCAACAAATCAATGACATGGAGTCTGGTTCTA
CACGTTATTGAAATATGTTGATGATATGAAAGGTATATATCAAGTGGTGGTGCAGATGAAAATA
TTCCACATCCAAATATAATCCAATCAGCTACTACATGCGTGTTTTATAGTCCAAGAACTAAATA
AACATTGCCAATGAATAGCATGTATAATTCATATGTATCCAAGTGAGATGCAAAACATAACTAC
TACAGCTAGCATTGAAACAACTAAAATCCCCAAACTTAGTCATCGAACACTCACAGAAAAGTAA
GCTAAGGTTCACTACCTGGTGGCATAAATCTCGAGTAGGAACCAGGATGAAAGCATTTGGTGCA
GGTTTTCGTATACGTCCTTCTGAGGACAACTTCAGTAGCTCGTGCAGAAGTGGGAGAAGATAGG
CAAAGGTCTTCCCAGAGCCAGTCTTGGCCTTTGCAACCACATCCTTCCCTTC
						
					

			
		

Sequences
Splice junction sequence	CTTCTGAGGACAACTTCAGTAGCTCGTGCAGAAGTGGGAGAAGATAGGCAAAGGTCTTCCCAGA GCCAGTCTTGGCCTTTGCAACCACATCCTTCCCTTCtgtaaatacatttttgaagtcaattcct ctgacaactccaaattcagcatctaaagtctgttgcaaatgtttgcgggacaccttttgctctt tctggttt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TGTAAATACATTTTTGAAGTCAATTCCTCTGACAACTCCAAATTCAGCATCTAAAGTCTGTTGC AAATGTTTGCGGGACACCTTTTGCTCTTTCTGGTTTTCCTTATTGGTTTGCTTCTTCCGTTTGC GGGACAATGTTGCCTCTTTTTTATTTTCCTCATTGGTTTGCTTCTCCTTTGTTTTAGTGTCATC CGTTGCTATTAGATAATCAAATAGCCTTGCGTTGAATGCCTAAAAAGAAATACACAAACAATTT AAATTATTTCTGGAGCCACCTTGTCATCACAAGCAATCTGTGCAAACTTCTAGCAAATGATTTG ATATCAAAGTCTTAAATATTGTTTAACAGGTAACCTTCCATACCAATGGCTTTTTTCTGTTTCT CAACAAAAGGGGTCCAAGACTAAACCAAAGCACAGGAAAGATATTGCTATTCACGTAATAGAGG CATATACTAGTCAATATTAAGAAACAAAGAAAAATGGCAGAGTTTTAGAGACGAGTGCCTTCAC AAAGCACAATTACATAATTAACAAGCAATCTAAGGAGCTAAAGGGAACCTAGCTCAGGGGTTCA TGCAACAACCAAGTTGTTTGCTTCATCTATCCATTTATTAAGTTCTTTATAATTACAAATAAGA AGTGTAGGCCTGATGCAGTGGTGAGAGCTGTCTAACTAAGTCATCTGGTCATGGGTTCAAAGCA GCCTCTCCGCATTTGCAGGGGGAGACTCATGTGGAAGCCTCGGTCTAACCTTTTTTCATAGTTA CAAATAATTTGATAAAAGCCGTGCAAAAAAGATACCTCTATAATATGTAGTCGGGAATTTTGTG GCAACTCAGCATTCAAAACTGCAGATCTTATCCCAAACTGCAAAAAGCAGAGCATATTCATCAT AAGTATGTTAATACTACAAATGAAGCATACATTAAAAATAGAATCGAAATAGAAGCAACATAGT ATGTGAACAAAAGCAGTTAAGTGAATAGTGTACACATAGAAACAATCATAGCATAGGCAAAGTT TGTATAGCATTATCCAAAAATGGCAGTACAAGATGTCGCATTATCCAAGGTGAGTGTGGTGTTG TATGGGAGGTTCTTGCCCCCTTTGGTCTTCTTAACATAATAATACACAACTCTCCAGCATGTTC GAGAAAAAAGATGTAGCGCCAATCCTTCAGTTAATTTTTTACAAGACTTGCCTAACCTGGTATT ATGGTTATCTGAAGAGACAAATGAACTTAATGACATAGCAAGAGAGTCAACTGTGACATGATTG TATGCTCAACTTTATAACATCAAATACAGAAGGAACAAAGTAGGTCACAAGGTCAATAATTGCA GCATATAAAGTCCAGGTTATCTCAAACCAGAATTCTAAGAATCAAACAATTCAGGATATGTACA AGTTTTTTAAGGTGTCGAGTAAAATAAAATACCTTTTTATAGATCCAGATGATCAATCACGTTG TAAGGGTAATAACACAAAGCAGTGGTTTGATTTACCTTTTCCAAGATCAGTCGTAATCTGAAAG CCATATCAATTGAGTTTACAAATATAAGAACTTTCTTCTGAATGAGCTCAAACTTTAGAAGTGC AAGGATATGAAGTATTTTATCCTTGGCATCACAGGAGATCTGTGGGCAAAAAATGAATGATATG CGATGAGCAGGAATGAAGAAATAGCAGTGTAAAAAGCCAAGTAACTTCAGCAAAATGAATACGA TTTTTTAAAATACGCCCATAGCTTAAGGATGACCTCAGATAAGGGACGGTCAGGAAAATGTAAC CCTGTCAAGCATGAGAACTTTTGGTTTTCCAGTTTTTTTTTTTGGAACCTTCAAGTTGCAATGG TAATATGAAAAGGAGCACAAGTACAGGAAGGAGGAAGCAGAAGATACTTGCCCAAAACTGCTGA ACATTTTTGGGGATCACATCATCCTTTGCTTGACCAACCTCCGAAAGAGTTAGAACAAATGGGT TATGCAGAAGTAGTTTTGTCAACTTGTCAACATCAGAGCTGCCATATAGTCAAATTTCAGTATC ACCAAAAATAACACAAATGCAAGCAAGGGCCCAAGTTACTAATGATATTTCTTAGCAAGGGCCT AAGTGGGAAACAGTAGCATGAATTCAATCCCCAACACTTACATGTCAGATGCATTCAAACAATT ATTAAACTATCAGCATAGACACATAAAGAGAAGCAACAGCACAAACAGGTCTAACAGCAACCAC CCACTTAACCAGCATGATAAAAATTTGGAAATAGAAAAAAAACAGAATTTCAAGAGCAAACCAT CTGAGGCAAGTAATTATAAAATAATGAAATGCTTAGATAAATCATAAATGTAGGGTGCAGAATC GAGATTTAATGGGTAGCTGCAGAAAAAGGACGAACATTGACCAGATTTAACCTTGAAGTTGCAG ACATCAGAATAGACTGACAGCTTCTCGGGATATGTGGGATGAGAGCTTTCAAGTCAACTTCGCA GCGGTAGGATAGAAGTAGGTCAGCCTGGCAACTAAAGATTGGTATATTAGTAACTTCTTCAAAA AGGAACTTGCGTGATGAACATTGTAATTAATACACAATAGGTGTGGATTCTGGTGTACATCACT TCAAAAAATGTTGTACTCCCTCCCTCAACCTTCTAAGGCATATTTTGATGCAAAAAAGTTGTAA TTTTGACCAACTGTTGTCAAATTAAATGTATGTTTTGAAGTCATATTAATACATTCATATTTTT GAAGTGTTTTGTAGTAATTGAAAATATACTGTGAAAAGAATTCAAAGGTTCAAATATGATTTTG AAAACTTTACATACCAAAGTATACCCTACAATAATAAACAGAAGGCTCATATGGCAATGCAGCT TTAAATAAAGTGTCACCAGATATGTAAAGTATGATCTCCAAGTCTTTAAAATGGTACAAATCAA ATTGTTTTCGAGTCAAGAGTCAAGTCGTGCAACTACTGACTAGACGACCAGTCGTGACTAGTCG AATATAAGTCGATGATTATATTTTTTATATTTTTCTATATATGCTAATACTAAAAACATGCTGA AACACTAAAAACACTTTGTTTAGTATATCTTCATCCATCTCTATTTCCTACAATATATCATTAA ATATTGAACAGTTTTGTAGCGAGTCTCCTATTGTTCTCTCTGATTTCAAAGAACTTGCTTGGAT TCAAAAACAGTGCATGCCCCATAAAGATTGGTAGTCATCTGACTGTCCCACCTCTTACCAACAA TAGAAATTACTTCATCAATTAGTCGCTCTTTGTGTTCCGAAGCTTCCTTGATGCTCTTTTTTTA TAGTCCATGGCGGCCCACATTTCAGCCATTGCTGGTCTCTACCATTTCAGCCTAACAAGATCTC TACCATTTGTCTTGGTCCTCATCAAGTCTTAAATCCTTCCTTGTCCATTGATCAACCTGGTCAT CTTCTTTGCTTTAGCAATGCAGCCACTAAACTCTTTTATCTTCCCAATAACCTCCAGCATGAGA TCCAAGTAGTAGGTAGCACAAGGTGTCCAAAATAAGGTAGGAAACTTACTAGGGTTTGAGATGG TTGGGTGGGTTCACATTTTTATACCTAGGCCCAAATAAGTCGCCCGACTCAAATGCTATGACTA GTCGACGAGTCGAGCGACTAGCAGAGAAAGTCGAGTCGTCCGACTAGCAGAGAAAGTCGAGTCG CTCGACTTTAAAACCTTGAATCAAAATCACCATATGCAAATACATGGGGAAAAATTAAACTATA GCTCAATTAAGAAAAATGGAATAACAGAAATTTCTTTTTATTATTTTATTAGACTGTGACAGAA AATATAGCATCACAAATTCAACGCTAGCATTCTTCTTTACATTGCAGGGCCAATGAAATATGTA AACAAAATGAAAGTAAACAAAAATATATATATGAACGACAACTGGAGAGCACCTCATCAAGAAT CATCATTGAAAGTGACTCTTTAACTGCAGGTCCACGAATAATTCCCTTTGATATGCATGTTGCA ACACAAGCTGGAGTTGATACGAGAATGTTAGGGGGGCCAGACAATGCAACAGTCTGCAAAAAAC AGGCAAAAGTAAGTTAGTTACTTGAGACAATAGACATAATAATAATAATAATAACAAAACATGG GTAACAAGTGGAGAAAATAACAATGGAACAGAATAGAATTCTCACAATATCCTTATCCGACATG CTCGCGGTAACTTGCACAACCCTCAATTTGCATGTACAGAGCTCAAGGAGAGATAATGCCTCAT TATACACCTATATCAAGCAAGTCGAGACAGCAGTGTTAGCTTCCTGTTTAGCAAAGATGAAAAC AAGGGGAAGGAAAATTATATCATACCCACATGATATTAATAGCCAGCAAATTAAAAATACATCA AAATAGTGAATATAAAAACATGTGTTTGCACTTCACTTGTCCAATGGGGAATCTCCATCTGTGC ACCACCTGATGTGCATTTTTCACCTATACCACTCAACAAATCAATGACATGGAGTCTGGTTCTA CACGTTATTGAAATATGTTGATGATATGAAAGGTATATATCAAGTGGTGGTGCAGATGAAAATA TTCCACATCCAAATATAATCCAATCAGCTACTACATGCGTGTTTTATAGTCCAAGAACTAAATA AACATTGCCAATGAATAGCATGTATAATTCATATGTATCCAAGTGAGATGCAAAACATAACTAC TACAGCTAGCATTGAAACAACTAAAATCCCCAAACTTAGTCATCGAACACTCACAGAAAAGTAA GCTAAGGTTCACTACCTGGTGGCATAAATCTCGAGTAGGAACCAGGATGAAAGCATTTGGTGCA GGTTTTCGTATACGTCCTTCTGAGGACAACTTCAGTAGCTCGTGCAGAAGTGGGAGAAGATAGG CAAAGGTCTTCCCAGAGCCAGTCTTGGCCTTTGCAACCACATCCTTCCCTTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.01930964

Conservation Information
Conserved circRNAs	NA
PMCS	0.01930964

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							9532657-9528435(-)
9528484-9533330(-)
						
						Potential amino acid sequence
						
							MSDKDITVALSGPPNILVSTPACVATCISKGIIRGPAVKESLSMMILDEISCDAKDKILHILAL
LKFELIQKKVLIFVNSIDMAFRLRLILEKVNQTTALCYYPYNFGIRSAVLNAELPQNSRLHIIE
AFNARLFDYLIATDDTKTKEKQTNEENKKEATLSRKRKKQTNKENQKEQKVSRKHLQQTLDAEF
GVVRGIDFKNVFTEGKDVVAKAKTGSGKTFAYLLPLLHELLKLSSEGRIRKPAPNAFILVPTRD
LCHQVYNEALSLLELCTCKLRVVQVTASMSDKDITVALSGPPNILVSTPACVATCISKGIIRGP
AVKESLSMMILDEISCDAKDKILHILALLKFELIQKKVLIFVNSIDMAFRLRLILEKVNQTTAL
CYYPYNFGIRSAVLNAELPQNSRLHIIEAFNARLFDYLIATDDTKTKEKQTNEENKKEATLSRK
RKKQTNKENQKEQKVSRKHLQQTLDAEFGVVRGIDFKNVFTEGKDVVAKAKTGSGKTFAYLLPL
LHELLKLSSEGRIRKPAPNAFILVPTRDLCHQVYNEALSLLELCTCKLRVVQVTASMSDKDITV
ALSGPPNILVSTPACVATCISKGIIRGPAVKESLSMMILDEISCDAKDKILHILALLKFELIQK
KVLIFVNSIDMAFRLRLILEKVNQTTALCYYPYNFGIRSAVLNAELPQNSRLHIIEAFNARLFD
YLIATDDTKTKEKQTNEENKKEATLSRKRKKQTNKENQKEQKVSRKHLQQTLDAEFGVVRGIDF
KNVFTEGKDVVAKAKTGSGKTFAYLLPLLHELLKLSSEGRIRKPAPNAFILVPTRDLCHQVYNE
ALSLLELCTCKLRVVQVTASMSDKDITVALSGPPNILVSTPACVATCISKGIIRGPAVKESLSM
MILDEISCDAKDKILHILALLKFELIQKKVLIFVNSIDMAFRLRLILEKVNQTTALCYYPYNFG
IRSAVLNAELPQNSRLHIIEAFNARLFDYLIATDDTKTKEKQTNEENKKEATLSRKRKKQTNKE
NQKEQKVSRKHLQQTLDAEFGVVRGIDFKNVFT(-)
MLNLELSEELTSKMYLQKGRMWLQRPRLALGRPLPIFSHFCTSY*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	9532657-9528435(-) 9528484-9533330(-)
Potential amino acid sequence	MSDKDITVALSGPPNILVSTPACVATCISKGIIRGPAVKESLSMMILDEISCDAKDKILHILAL LKFELIQKKVLIFVNSIDMAFRLRLILEKVNQTTALCYYPYNFGIRSAVLNAELPQNSRLHIIE AFNARLFDYLIATDDTKTKEKQTNEENKKEATLSRKRKKQTNKENQKEQKVSRKHLQQTLDAEF GVVRGIDFKNVFTEGKDVVAKAKTGSGKTFAYLLPLLHELLKLSSEGRIRKPAPNAFILVPTRD LCHQVYNEALSLLELCTCKLRVVQVTASMSDKDITVALSGPPNILVSTPACVATCISKGIIRGP AVKESLSMMILDEISCDAKDKILHILALLKFELIQKKVLIFVNSIDMAFRLRLILEKVNQTTAL CYYPYNFGIRSAVLNAELPQNSRLHIIEAFNARLFDYLIATDDTKTKEKQTNEENKKEATLSRK RKKQTNKENQKEQKVSRKHLQQTLDAEFGVVRGIDFKNVFTEGKDVVAKAKTGSGKTFAYLLPL LHELLKLSSEGRIRKPAPNAFILVPTRDLCHQVYNEALSLLELCTCKLRVVQVTASMSDKDITV ALSGPPNILVSTPACVATCISKGIIRGPAVKESLSMMILDEISCDAKDKILHILALLKFELIQK KVLIFVNSIDMAFRLRLILEKVNQTTALCYYPYNFGIRSAVLNAELPQNSRLHIIEAFNARLFD YLIATDDTKTKEKQTNEENKKEATLSRKRKKQTNKENQKEQKVSRKHLQQTLDAEFGVVRGIDF KNVFTEGKDVVAKAKTGSGKTFAYLLPLLHELLKLSSEGRIRKPAPNAFILVPTRDLCHQVYNE ALSLLELCTCKLRVVQVTASMSDKDITVALSGPPNILVSTPACVATCISKGIIRGPAVKESLSM MILDEISCDAKDKILHILALLKFELIQKKVLIFVNSIDMAFRLRLILEKVNQTTALCYYPYNFG IRSAVLNAELPQNSRLHIIEAFNARLFDYLIATDDTKTKEKQTNEENKKEATLSRKRKKQTNKE NQKEQKVSRKHLQQTLDAEFGVVRGIDFKNVFT(-) MLNLELSEELTSKMYLQKGRMWLQRPRLALGRPLPIFSHFCTSY*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d013358_circ_g.2

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