Plant Circular RNA Database

Detail information of AT4G03560_circ_g.3

			
						 General Information
					
						CircRNA Name
						AT4G03560_circ_g.3
					
						ID in PlantcircBase
						ath_circ_029595
					
						Alias
						Ath_circ_FC2537, Ath_circ_FC2538
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 1580701-1584359  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder
					
						Parent gene
						
							AT4G03560						
					
						Parent gene annotation
						
							AT4G03560 protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT4G03560_circ_g.1 AT4G03560_circ_g.2 AT4G03560_circ_g.4 AT4G03560_circ_g.5 AT4G03560_circ_g.6 AT4G03560_circ_g.7 AT4G03560_circ_g.8 AT4G03560_circ_g.9 AT4G03560_circ_g.10 						
					
						Support reads
						16
					
						Tissues
						whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G03560.1:16

General Information
CircRNA Name	AT4G03560_circ_g.3
ID in PlantcircBase	ath_circ_029595
Alias	Ath_circ_FC2537, Ath_circ_FC2538
Organism	Arabidpsis thaliana
Position	chr4: 1580701-1584359 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer, PcircRNA_finder
Parent gene	AT4G03560
Parent gene annotation	AT4G03560 protein
Parent gene strand	+
Alternative splicing	AT4G03560_circ_g.1 AT4G03560_circ_g.2 AT4G03560_circ_g.4 AT4G03560_circ_g.5 AT4G03560_circ_g.6 AT4G03560_circ_g.7 AT4G03560_circ_g.8 AT4G03560_circ_g.9 AT4G03560_circ_g.10
Support reads	16
Tissues	whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G03560.1:16

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGCATTTATTGCGACGTTCATAACTCTTATTCCAAGTTTGATGCCATATTTAGGGACCATTTTC
TGCGTGCTGTGTATCTACTGCTCTATTGGCGTACAGgctgaagatggtattggtcttcctgtgg
aaatacttgatcagtcgagtttcggggagtctgctaggtattacttcatcttcacacgtttgga
tctgatct

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GCTGAAGATGGTATTGGTCTTCCTGTGGAAATACTTGATCAGTCGAGTTTCGGGGAGTCTGCTA
GGTATTACTTCATCTTCACACGTTTGGATCTGATCTGGTCACTCAACTATTTCGCTCTGCTTTT
CCTTAACTTCTTCGAGGTCAGCACATTTCTTTGGTATACACCAACCTTGCTTGAAAAATTTATA
GAAAATCACAACTTGAAAGTAATCACACACTTTTCCTGTCTTTTGCAGCAACCATTGTGGTGTG
AAAAAAACCCTAAACCGTCTTGCAAAGATAGAGATTACTATTACCTGGGAGAGTTACCGTACTT
GACCAATGCAGAATCCATTATCTATGAGGCAAGTAATTACACTTAAGTCTTGTTTGCCTTTGTT
TTTTTGCTATAGATGCATAGATTTAGTGCAGATGGGCTCATGATATACATGTACATCCACTTGA
AAGTTTAAGACTTGAATTGCCTTATGTTTGTTTTCTTTAAATCTTGAGAAGCCTTGAGTATTTA
TTCAAGACTAGTTTATCTCGTTTAATTCGTCGTTAAGAACTTAATATCAACACTCACATCTTAT
TTTGGATATGTTTATTATAAGGACTGGCCAAGATCCTTTTCTCATTGTGCTGAAATTATAATAT
TCTTTGCTGTCCAAATAGGTGATTACCCTGGCTATACTCCTTGTACATACTTTCTTCCCGATAT
CCTATGAAGGTTCCCGAATCTTTTGGACTAGTCGCCTGAATCTAGTGAAGGTATTTCCTTACTA
GCCACTTCACAGTTTTGTGTTTCTTCTTTTTGTTGAAAATCGATCAGAAAGTAAGAAATTCCTT
TTCTTCGTGCAACAATTTGTCTTCATATTGATTCCAGGTTGCTTGCGTGGTAATTTTGTTTGTT
GATGTGCTGGTTGACTTTCTGTATCTGTCTCCACTGGCTTTCGACTTTCTCCCTTTTAGAATCG
CCCCATACGTGAGAGTTATCATATTCATCCTCAGCATAAGGTATCCGTAGATCTCTGCTTCTTT
TCTATCAACTATATGGGTTATATGTCTTTATTTCTATAGACAAAGATGCGCAGATCATGTCATG
TATGATAAATGTCGACGTGTGATTATTTGACCTACTATTCCTCCTATTAAATCTCTAAATACAG
CACATTCCCCAAAGTTATGATTCTTTACATTTCTGTACAGGGAACTTCGGGACACCCTTGTCCT
TCTGTCTGGAATGCTTGGCACATACTTGAATATCTTGGTCAGTGGCCTTCCCCAATCATTTTTG
ACTTTCAGATAAGTAATTAACTCATATTGATTGTCATCCTATTTACTTAACTCCTTGAATATTT
TCACAGGCTCTATGGATGCTGTTCCTTCTATTTGCCAGTTGGATTGCTTTTGTTATGTTTGAGG
ACACGCAGCAGGGCCTCACGGTCTTCACTTCATATGGTGCAACTCTTTACCAGATGTTTATTTT
GTTCACAACATCCAACAATCCTGATGTCTGGATTCCTGCATACAAGTAAGTATTAGGTGAAATC
CCATTTGTGTCTCAGTTTGCTTGTATGGCGTTGCATCCAGTAATTTAGTGACTTATTTGTTCTG
TCCTCTAAGGTCTTCTCGCTGGTCTTCGGTGTTCTTCGTGCTCTACGTGCTAATTGGCGTCTAC
TTTGTCACAAACTTGATTCTTGCCGTTGTTTATGACAGTTTCAAAGAACAGGTGGATTAAGGAT
TTGATGTTTGTATGGTTCTTATGTCAGCTTTTAAAACAAAAGTATTAACCTCTTTTGACACCTT
GTGTCATATCATATCTATTCTGTTTGCAGCTCGCAAAGCAAGTATCTGGAATGGATCAAATGAA
GAGAAGAATGTTGGAGAAAGCCTTTGGTCTTATAGACTCAGACGTAAGTTCATCTACGCATAGT
GATTATATCTACTCCTAGAGATATCCGGAGAAGTTCTCCTTGGGCAAAGATCTTCATGAATGGA
GAGTCTTTGTATAGTTAACCACTTTGCTGAGCATATATTTCTTCGTTCTTTATTTCATGTTTTA
ACAGAAAAACGGGGAGATTGATAAGAACCAATGCATTAAGCTCTTTGAACAGTTGACTAATTAC
AGGTTTGTTGCTATGATCTTTGGTATTTTCAATCTTTCCTATGTTTCGAAAAAGAAATACATCT
TTTATATACTTGTTTGTGGTTTCTTCCCTTTTGTATGTTAACTTGTGAGACCTGATAATGATAT
GCATTCATTTTTCCTTATAGGACGTTGCCGAAGATATCAAAAGAAGAATTCGGATTGATATTTG
ATGAGCTTGACGATACTCGTGACTTTAAGGTAGAGATCTGTGAAGGATGTGGCACATATGATCA
GGATACACCTTAAGATTACTATTCACCTAAACCTCTTGACGACTAACAGATTCTTTGTCCCCTT
TTTGTTTCCTGTTGAGCAGATAAACAAGGATGAGTTTGCTGACCTCTGCCAGGCCATTGCTTTA
AGATTCCAAAAGGAGGAAGTAGTAAGTTCACATATACTTTATTTTCCTTCTCTCAAAATTTACT
TACCTCCACCATATGTTTACATTAGCGATCCTTTTTGTTTTCATTGCAGCCGTCTCTCTTTGAA
CATTTTCCGCAAATTTACCATTCCGCCTTATCACAACAACTGAGAGCCTTTGTTCGAAGCCCCA
ACTTTGGCTACGCTATTTCTTTCATCCTCATTATCAATTTCATTGCTGTCGTTGTTGAAACAAC
GGTATATCATGTTCCCATATTTCTTTGACATGCGATTCCTAATTCTTTCATAAGCCATAACAGA
TTTTGGTATGCAGCTTGATATCGAAGAAAGCTCGGCTCAGAAGCCATGGCAGGTTGCCGAGTTT
GTCTTTGGTAAGAACTTGAATAGGTTTCCACTATCTTCTCTCCATTTTGTATTTTTCTTCTATT
TGATGCTTTGTGAAGTGTATAATCTATGGTTACTGAGAAATATGATGAAAAGATGAAGAATGAA
ATAGAAGTTAAGCTATTTCCTGTGTTATTACACTGAGTAGAGTACTTCTATGGATCATATTAGA
TTGTAACAGCCGAATTTTATTGACCACCTTTTCAGAGTCTTAACTTTTTCTTCTTTTAATTTCT
ATCTTTGAATGTTTTTACAGGTTGGATATATGTGTTGGAGATGGCTCTGAAGATCTATACATAT
GGATTTGAGAATTATTGGAGAGAGGGTGCTAACCGATTTGATTTTCTAGTCACATGGGTCATAG
GTAACCTATTGAAGCAGCATTTTCATCTTGTTTTGCTGATTGAGTGATTGATGGCTATGCTATA
AGTGATAATCTTTGTATCTGCAGTTATTGGGGAAACAGCTACCTTCATAACTCCAGACGAGAAT
ACTTTCTTCTCAAATGGAGAATGGTGAGGAATAACGATGACATATTTGTTACAATGGTCTTCTT
TTGTACTAACCCAGACTCTGGTTCTCATTGATAGGATCCGGTACCTTCTCCTGGCGAGAATGTT
AAGACTGATAAGGCTTCTTATGAACGTCCAGCGATACCGAGCATTTATTGCGACGTTCATAACT
CTTATTCCAAGTTTGATGCCATATTTAGGGACCATTTTCTGCGTGCTGTGTATCTACTGCTCTA
TTGGCGTACAG
						
					

			
		

Sequences
Splice junction sequence	AGCATTTATTGCGACGTTCATAACTCTTATTCCAAGTTTGATGCCATATTTAGGGACCATTTTC TGCGTGCTGTGTATCTACTGCTCTATTGGCGTACAGgctgaagatggtattggtcttcctgtgg aaatacttgatcagtcgagtttcggggagtctgctaggtattacttcatcttcacacgtttgga tctgatct
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GCTGAAGATGGTATTGGTCTTCCTGTGGAAATACTTGATCAGTCGAGTTTCGGGGAGTCTGCTA GGTATTACTTCATCTTCACACGTTTGGATCTGATCTGGTCACTCAACTATTTCGCTCTGCTTTT CCTTAACTTCTTCGAGGTCAGCACATTTCTTTGGTATACACCAACCTTGCTTGAAAAATTTATA GAAAATCACAACTTGAAAGTAATCACACACTTTTCCTGTCTTTTGCAGCAACCATTGTGGTGTG AAAAAAACCCTAAACCGTCTTGCAAAGATAGAGATTACTATTACCTGGGAGAGTTACCGTACTT GACCAATGCAGAATCCATTATCTATGAGGCAAGTAATTACACTTAAGTCTTGTTTGCCTTTGTT TTTTTGCTATAGATGCATAGATTTAGTGCAGATGGGCTCATGATATACATGTACATCCACTTGA AAGTTTAAGACTTGAATTGCCTTATGTTTGTTTTCTTTAAATCTTGAGAAGCCTTGAGTATTTA TTCAAGACTAGTTTATCTCGTTTAATTCGTCGTTAAGAACTTAATATCAACACTCACATCTTAT TTTGGATATGTTTATTATAAGGACTGGCCAAGATCCTTTTCTCATTGTGCTGAAATTATAATAT TCTTTGCTGTCCAAATAGGTGATTACCCTGGCTATACTCCTTGTACATACTTTCTTCCCGATAT CCTATGAAGGTTCCCGAATCTTTTGGACTAGTCGCCTGAATCTAGTGAAGGTATTTCCTTACTA GCCACTTCACAGTTTTGTGTTTCTTCTTTTTGTTGAAAATCGATCAGAAAGTAAGAAATTCCTT TTCTTCGTGCAACAATTTGTCTTCATATTGATTCCAGGTTGCTTGCGTGGTAATTTTGTTTGTT GATGTGCTGGTTGACTTTCTGTATCTGTCTCCACTGGCTTTCGACTTTCTCCCTTTTAGAATCG CCCCATACGTGAGAGTTATCATATTCATCCTCAGCATAAGGTATCCGTAGATCTCTGCTTCTTT TCTATCAACTATATGGGTTATATGTCTTTATTTCTATAGACAAAGATGCGCAGATCATGTCATG TATGATAAATGTCGACGTGTGATTATTTGACCTACTATTCCTCCTATTAAATCTCTAAATACAG CACATTCCCCAAAGTTATGATTCTTTACATTTCTGTACAGGGAACTTCGGGACACCCTTGTCCT TCTGTCTGGAATGCTTGGCACATACTTGAATATCTTGGTCAGTGGCCTTCCCCAATCATTTTTG ACTTTCAGATAAGTAATTAACTCATATTGATTGTCATCCTATTTACTTAACTCCTTGAATATTT TCACAGGCTCTATGGATGCTGTTCCTTCTATTTGCCAGTTGGATTGCTTTTGTTATGTTTGAGG ACACGCAGCAGGGCCTCACGGTCTTCACTTCATATGGTGCAACTCTTTACCAGATGTTTATTTT GTTCACAACATCCAACAATCCTGATGTCTGGATTCCTGCATACAAGTAAGTATTAGGTGAAATC CCATTTGTGTCTCAGTTTGCTTGTATGGCGTTGCATCCAGTAATTTAGTGACTTATTTGTTCTG TCCTCTAAGGTCTTCTCGCTGGTCTTCGGTGTTCTTCGTGCTCTACGTGCTAATTGGCGTCTAC TTTGTCACAAACTTGATTCTTGCCGTTGTTTATGACAGTTTCAAAGAACAGGTGGATTAAGGAT TTGATGTTTGTATGGTTCTTATGTCAGCTTTTAAAACAAAAGTATTAACCTCTTTTGACACCTT GTGTCATATCATATCTATTCTGTTTGCAGCTCGCAAAGCAAGTATCTGGAATGGATCAAATGAA GAGAAGAATGTTGGAGAAAGCCTTTGGTCTTATAGACTCAGACGTAAGTTCATCTACGCATAGT GATTATATCTACTCCTAGAGATATCCGGAGAAGTTCTCCTTGGGCAAAGATCTTCATGAATGGA GAGTCTTTGTATAGTTAACCACTTTGCTGAGCATATATTTCTTCGTTCTTTATTTCATGTTTTA ACAGAAAAACGGGGAGATTGATAAGAACCAATGCATTAAGCTCTTTGAACAGTTGACTAATTAC AGGTTTGTTGCTATGATCTTTGGTATTTTCAATCTTTCCTATGTTTCGAAAAAGAAATACATCT TTTATATACTTGTTTGTGGTTTCTTCCCTTTTGTATGTTAACTTGTGAGACCTGATAATGATAT GCATTCATTTTTCCTTATAGGACGTTGCCGAAGATATCAAAAGAAGAATTCGGATTGATATTTG ATGAGCTTGACGATACTCGTGACTTTAAGGTAGAGATCTGTGAAGGATGTGGCACATATGATCA GGATACACCTTAAGATTACTATTCACCTAAACCTCTTGACGACTAACAGATTCTTTGTCCCCTT TTTGTTTCCTGTTGAGCAGATAAACAAGGATGAGTTTGCTGACCTCTGCCAGGCCATTGCTTTA AGATTCCAAAAGGAGGAAGTAGTAAGTTCACATATACTTTATTTTCCTTCTCTCAAAATTTACT TACCTCCACCATATGTTTACATTAGCGATCCTTTTTGTTTTCATTGCAGCCGTCTCTCTTTGAA CATTTTCCGCAAATTTACCATTCCGCCTTATCACAACAACTGAGAGCCTTTGTTCGAAGCCCCA ACTTTGGCTACGCTATTTCTTTCATCCTCATTATCAATTTCATTGCTGTCGTTGTTGAAACAAC GGTATATCATGTTCCCATATTTCTTTGACATGCGATTCCTAATTCTTTCATAAGCCATAACAGA TTTTGGTATGCAGCTTGATATCGAAGAAAGCTCGGCTCAGAAGCCATGGCAGGTTGCCGAGTTT GTCTTTGGTAAGAACTTGAATAGGTTTCCACTATCTTCTCTCCATTTTGTATTTTTCTTCTATT TGATGCTTTGTGAAGTGTATAATCTATGGTTACTGAGAAATATGATGAAAAGATGAAGAATGAA ATAGAAGTTAAGCTATTTCCTGTGTTATTACACTGAGTAGAGTACTTCTATGGATCATATTAGA TTGTAACAGCCGAATTTTATTGACCACCTTTTCAGAGTCTTAACTTTTTCTTCTTTTAATTTCT ATCTTTGAATGTTTTTACAGGTTGGATATATGTGTTGGAGATGGCTCTGAAGATCTATACATAT GGATTTGAGAATTATTGGAGAGAGGGTGCTAACCGATTTGATTTTCTAGTCACATGGGTCATAG GTAACCTATTGAAGCAGCATTTTCATCTTGTTTTGCTGATTGAGTGATTGATGGCTATGCTATA AGTGATAATCTTTGTATCTGCAGTTATTGGGGAAACAGCTACCTTCATAACTCCAGACGAGAAT ACTTTCTTCTCAAATGGAGAATGGTGAGGAATAACGATGACATATTTGTTACAATGGTCTTCTT TTGTACTAACCCAGACTCTGGTTCTCATTGATAGGATCCGGTACCTTCTCCTGGCGAGAATGTT AAGACTGATAAGGCTTCTTATGAACGTCCAGCGATACCGAGCATTTATTGCGACGTTCATAACT CTTATTCCAAGTTTGATGCCATATTTAGGGACCATTTTCTGCGTGCTGTGTATCTACTGCTCTA TTGGCGTACAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.108808135

Conservation Information
Conserved circRNAs	NA
PMCS	0.108808135

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							1581927-1584356(+)
						
					

						Potential amino acid sequence
						
							MLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQMFILFTTSNNPDVWIPAY
KSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKN
GEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDDTRDFKINKDEFADLCQAIALRFQKEE
VPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAISFILIINFIAVVVETTLDIEESSAQKPWQVA
EFVFGWIYVLEMALKIYTYGFENYWREGANRFDFLVTWVIVIGETATFITPDENTFFSNGEWIR
YLLLARMLRLIRLLMNVQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQAEDGIGLPVE
ILDQSSFGESARYYFIFTRLDLIWSLNYFALLFLNFFEQPLWCEKNPKPSCKDRDYYYLGELPY
LTNAESIIYEVITLAILLVHTFFPISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLA
FDFLPFRIAPYVRVIIFILSIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQ
QGLTVFTSYGATLYQMFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYD
SFKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGL
IFDELDDTRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGY
AISFILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMALKIYTYGFENYWREGANR
FDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNVQRYRAFIATFITLI
PSLMPYLGTIFCVLCIYCSIGVQAEDGIGLPVEILDQSSFGESARYYFIFTRLDLIWSLNYFAL
LFLNFFEQPLWCEKNPKPSCKDRDYYYLGELPYLTNAESIIYEVITLAILLVHTFFPISYEGSR
IFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFILSIRELRDTLVLL
SGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQMFILFTTSNNPDVWIP
AYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVSGMDQMKRRMLEKAFGLIDSD
KNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDDTRDFKINKDEFADLCQAIALRFQK
EEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAISFILIINFIAVVVETTLDIEESSAQKPWQ
VAEFVFGWIYVLEMALKIYTYGFENYWREGANRFDFLVTWVIVIGETATFITPDENTFFSNGEW
IRYLLLARMLRLIRLLMNVQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQAEDGIGLP
VEILDQSSFGESARYYFIFTRLDLIWSLNYFALLFLNFFEQPLWCEKNPKPSCKDRDYYYLGEL
PYLTNAESIIYEVITLAILLVHTFFPISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSP
LAFDFLPFRIAPYVRVIIFILSIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFED
TQQGLTVFTSYGATLYQMFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVV
YDSFKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEF
GLIFDELDDTRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNF
GYAISFILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMALKIYTYGFENYWREGA
NRFDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNVQRYRAFIATFIT
LIPSLMPYLGTIFCVLCIYCSIGVQ(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	1581927-1584356(+)
Potential amino acid sequence	MLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQMFILFTTSNNPDVWIPAY KSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKN GEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDDTRDFKINKDEFADLCQAIALRFQKEE VPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAISFILIINFIAVVVETTLDIEESSAQKPWQVA EFVFGWIYVLEMALKIYTYGFENYWREGANRFDFLVTWVIVIGETATFITPDENTFFSNGEWIR YLLLARMLRLIRLLMNVQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQAEDGIGLPVE ILDQSSFGESARYYFIFTRLDLIWSLNYFALLFLNFFEQPLWCEKNPKPSCKDRDYYYLGELPY LTNAESIIYEVITLAILLVHTFFPISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLA FDFLPFRIAPYVRVIIFILSIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQ QGLTVFTSYGATLYQMFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYD SFKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGL IFDELDDTRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGY AISFILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMALKIYTYGFENYWREGANR FDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNVQRYRAFIATFITLI PSLMPYLGTIFCVLCIYCSIGVQAEDGIGLPVEILDQSSFGESARYYFIFTRLDLIWSLNYFAL LFLNFFEQPLWCEKNPKPSCKDRDYYYLGELPYLTNAESIIYEVITLAILLVHTFFPISYEGSR IFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFILSIRELRDTLVLL SGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQMFILFTTSNNPDVWIP AYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVSGMDQMKRRMLEKAFGLIDSD KNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDDTRDFKINKDEFADLCQAIALRFQK EEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAISFILIINFIAVVVETTLDIEESSAQKPWQ VAEFVFGWIYVLEMALKIYTYGFENYWREGANRFDFLVTWVIVIGETATFITPDENTFFSNGEW IRYLLLARMLRLIRLLMNVQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQAEDGIGLP VEILDQSSFGESARYYFIFTRLDLIWSLNYFALLFLNFFEQPLWCEKNPKPSCKDRDYYYLGEL PYLTNAESIIYEVITLAILLVHTFFPISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSP LAFDFLPFRIAPYVRVIIFILSIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFED TQQGLTVFTSYGATLYQMFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVV YDSFKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEF GLIFDELDDTRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNF GYAISFILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMALKIYTYGFENYWREGA NRFDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNVQRYRAFIATFIT LIPSLMPYLGTIFCVLCIYCSIGVQ(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017;Chen et al., 2017a

circRNA

Detail information of AT4G03560_circ_g.3

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