Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0716000_circ_g.5 |
ID in PlantcircBase | osa_circ_032345 |
Alias | NA |
Organism | Oryza sativa |
Position | chr6: 30413894-30414088 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | circseq_cup |
Parent gene | Os06g0716000 |
Parent gene annotation |
Protein of unknown function DUF668 family protein. (Os06t0716000 -01);Hypothetical conserved gene. (Os06t0716000-02) |
Parent gene strand | + |
Alternative splicing | Os06g0716000_circ_g.4 Os06g0716000_circ_g.6 Os06g0716000_circ_g.7 Os06g0716000_circ_g.8 Os06g0716000_circ_g.9 Os06g0716000_circ_g.10 |
Support reads | 3 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | AG-GC |
Number of exons covered | Os06t0716050-00:1 Os06t0716000-02:1 Os06t0716050-00:1 Os06t0716000-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.422651368 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2016 |