Plant Circular RNA Database

Detail information of Os05g0290400_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os05g0290400_circ_g.2
					
						ID in PlantcircBase
						osa_circ_027247
					
						Alias
						Os_ciR3051
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr5: 12678512-12681285  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os05g0290400						
					
						Parent gene annotation
						
							Hypothetical gene. (Os05t0290400-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						4/1
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os05t0290400-01:5

General Information
CircRNA Name	Os05g0290400_circ_g.2
ID in PlantcircBase	osa_circ_027247
Alias	Os_ciR3051
Organism	Oryza sativa
Position	chr5: 12678512-12681285 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os05g0290400
Parent gene annotation	Hypothetical gene. (Os05t0290400-01)
Parent gene strand	+
Alternative splicing	NA
Support reads	4/1
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os05t0290400-01:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CAAATTCTCTTGGAAGATGCATACAATCCCCCAGAATGGTGAATGCCGCACATTCTTGTAGCCT
TGCTGGCATCCTTGTATTTGAGGAAAGGATGACAGTctgaaaagacgccataatgatgccactg
tctgaatctgtcttgaatatatcaaggagatcaaccactgaagcagggtaacatgcaatgttgc
aagctgga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1391
Transcript exons: 12678512-12679006,12680110-12680331,12680402-12680505,12
680586-12680723,12680854-12681285
CTGAAAAGACGCCATAATGATGCCACTGTCTGAATCTGTCTTGAATATATCAAGGAGATCAACC
ACTGAAGCAGGGTAACATGCAATGTTGCAAGCTGGATAACATCTATGAAGAATGAAACAGGAAC
TGTTAAACCAAGAAGGATCCCAGAAAATGCAAGACCCCAAATTATGTGCCTTAGGAAGCCTCCC
ACAATTGACCAAAGAGTTGAATATATCTGAATTGCATTAAGTGAAATCATGCCTAAAAGCTCTG
CCAACTCTGTATTCAGCTTAAAGCCTGCTGGAACACCCATCAGCCACACACAGCCAGATCTCAA
AACACTATCGGTCATGTAGTGAACAAGAGCAAAGGTCCAAGAACAAATTATCTCTGTTTTCAAC
AATAGCACTACTCCAAGGAATAAACCAGTCAAGAGATCCATCACAATATTTGACCACAACATAT
GCTTCTGAATTGCTGCTTTATGTGCATATTCAACATTCACAGTAGAGCTTAGGGATCTATCTTG
CAGGATAATTGGCCAGTAGAGAATATGGCAGCAACGGAGATGCATGTTTTTCCATGAATGCCCA
AAAACCTTTTGTAACATGAAGTACTGATATATATTGCTTAAATATTTTTGGAACACTTGAATGA
AGATGTAGACGATAGTCGATATTGAAGCCAAAAGTATTCCCACGGAGTGCCATGTTACTTGAAC
TATCGCAAAAACCACAGATGCAAAGAGAAAGCGAGCCACAGAATTACTGGTAGCAGCTTCCTGA
GCAACTGATAGTCTAGCAGCATTTGAACAATTAAGTCCCAAAATAATTGGATCCAAATCAAATT
CTAATCGTTTGCATTCTAGATTATTTATCCAATTTGGCTTTCTGAAGGAAGACTTTGATCTGCA
AGGTGCATCCTCACCCAGGGAAAAATGGTTTCCACAAGCAGTTGGAACATCATATAGTACGACG
TGGCAATGACTAGTCTCAAACTTCTGGTCATCAAGGCACAAATAATGAAGCACAGGGACTTGAT
TCAGATTGCATTTCAAGCTCTTGCTAGACTTAAAGCACAAGTGCACCCTGTTGTGCTCTTTGAC
TACTGACTTCTTGCAAGCATCCAGAAGACCATCTAAGATGCTACAATCATATTCCCATTTGCTA
CTGTAGCCGCTTTGGTCTTGGGCTCCACTTTCCAATGATCCACTCGATACAACAGGACTGTTCT
GGGTCATATAAAAATGCCCTTTTTGAACAGATTGAGTCCCCAATGGCTGATGATGTTGTTTACT
ACAGCATACTTCAAATTCTCTTGGAAGATGCATACAATCCCCCAGAATGGTGAATGCCGCACAT
TCTTGTAGCCTTGCTGGCATCCTTGTATTTGAGGAAAGGATGACAGT
						
					

						Genomic sequence
						
							CTGAAAAGACGCCATAATGATGCCACTGTCTGAATCTGTCTTGAATATATCAAGGAGATCAACC
ACTGAAGCAGGGTAACATGCAATGTTGCAAGCTGGATAACATCTATGAAGAATGAAACAGGAAC
TGTTAAACCAAGAAGGATCCCAGAAAATGCAAGACCCCAAATTATGTGCCTTAGGAAGCCTCCC
ACAATTGACCAAAGAGTTGAATATATCTGAATTGCATTAAGTGAAATCATGCCTAAAAGCTCTG
CCAACTCTGTATTCAGCTTAAAGCCTGCTGGAACACCCATCAGCCACACACAGCCAGATCTCAA
AACACTATCGGTCATGTAGTGAACAAGAGCAAAGGTCCAAGAACAAATTATCTCTGTTTTCAAC
AATAGCACTACTCCAAGGAATAAACCAGTCAAGAGATCCATCACAATATTTGACCACAACATAT
GCTTCTGAATTGCTGCTTTATGTGCATATTCAACATTCACAGTAGAGCTACATAGCAAAAGCAA
AGTGGAACAAACTGTAGTTGAAGATAAGCTTCTGCTACTCATAAAAAAGAATCAACTATAATTG
AAGAGAAGTTTCACATAACTACATTTTGCTTTATCATCACTTAATAACTACAGAGTACTTCCTC
CGGTTCCATAATACTTGTCATTTTAGACAAGGACACGGTCTCCAAAAAACCACTTTGACCATTA
TTGTCTATTACAACATATATAGAAATATCAACAAATATATGATTTTATTAAAGTGTCATTCAAG
ATTATTCTATACATATAGTTTCCATGTTTGTAAAGTAATATTTTAAGGGCTTGTTCGGATCACA
GGATAGGAAAAACACAGCAATAATATAGGATTGCATATGCAAAACGTAGGATTGAAAAACATAG
GAATTTGATGGTGTGGAGCGTTCGGAATACAGGAATATATAAACCATAGGAATTTTCCAATCAA
CAGTAATCTCATAGATTATGGTCTAATTAAGCAATAAAATATTAGTTCCCATCTAGTCACTCCA
ACGTGATTAGCATCCATCCCGTCGTACCTAATGAAAAAAATGAGGTTTGAGTAGATGTTCAAAA
TCCTGTGAAATTCCTACGTTTTCACAGGGTTGCTATAGTATTCCTACAAAATTCCTACGCATGA
TTCATTTGAACCGAATGCATAAACAGTATCAAATTCAAAGGAATCGCTAATCCTACAAAAATCA
TGTGAAATCTCTCCATTCTTAACAATCCCTAAAATTTATTTATAGTCAAAGTTCTAAAAGTTTG
ACCTCAGCCTTGTCCAAAACGAAAGTATTATGGAACCGGAGGGAGTACTAAATATAATTTCTCC
TAATATTGGAAATTATAGAGGTTCTTTACATGACAGCTAACATAGAACAAAATATAGAAGCAAT
TAGTTTACAATCATAGATTAAAAAATAAGGAACCTAAGTTTTGACTGTGCCACCATGCAACTGC
AATATGGAATGCCATATGCCATCCTATCTAGCAACAGTAACTCCATTTGGCATGTCAAGATAAT
TCACTAAAACAGTATAAAAGAAGCTAATACTTAACTACAGCAGCATCAAAAGTCAAGTTTACCT
TAGGGATCTATCTTGCAGGATAATTGGCCAGTAGAGAATATGGCAGCAACGGAGATGCATGTTT
TTCCATGAATGCCCAAAAACCTTTTGTAACATGAAGTACTGATATATATTGCTTAAATATTTTT
GGAACACTTGAATGAAGATGTAGACGATAGTCGATATTGAAGCCAAAAGTATTCCCACGGAGTG
CCATGTTACTTGAACTATCGCAAAAACCCTAAATGAATAGGAAGTAAGAAAGGTGCAAAGCAGT
CGTACATCAAATATGATTAAGCAATGGTGCTTACACAGATGCAAAGAGAAAGCGAGCCACAGAA
TTACTGGTAGCAGCTTCCTGAGCAACTGATAGTCTAGCAGCATTTGAACAATTAAGTCCCAAAA
TAATTGGATCCTTTGGACAAAGATGTGAAACAGATCAGCCAATTACTAAAATTAAAATGTAACA
GCGTATCAAAGCATTCATGCACATACCAAATCAAATTCTAATCGTTTGCATTCTAGATTATTTA
TCCAATTTGGCTTTCTGAAGGAAGACTTTGATCTGCAAGGTGCATCCTCACCCAGGGAAAAATG
GTTTCCACAAGCAGTTGGAACATCATATAGTACGACCTAAATAAATGATACAGCATTTATAAGT
AACTCATCACAGGAACAAATCATTACTAGTGAGCAACAAAATTAAAATGGTTCAAGTTATGGTT
AACAAATTATGTTCAGAAGTGAGAATTGACTTACATACGTGGCAATGACTAGTCTCAAACTTCT
GGTCATCAAGGCACAAATAATGAAGCACAGGGACTTGATTCAGATTGCATTTCAAGCTCTTGCT
AGACTTAAAGCACAAGTGCACCCTGTTGTGCTCTTTGACTACTGACTTCTTGCAAGCATCCAGA
AGACCATCTAAGATGCTACAATCATATTCCCATTTGCTACTGTAGCCGCTTTGGTCTTGGGCTC
CACTTTCCAATGATCCACTCGATACAACAGGACTGTTCTGGGTCATATAAAAATGCCCTTTTTG
AACAGATTGAGTCCCCAATGGCTGATGATGTTGTTTACTACAGCATACTTCAAATTCTCTTGGA
AGATGCATACAATCCCCCAGAATGGTGAATGCCGCACATTCTTGTAGCCTTGCTGGCATCCTTG
TATTTGAGGAAAGGATGACAGT
						
					

			
		

Sequences
Splice junction sequence	CAAATTCTCTTGGAAGATGCATACAATCCCCCAGAATGGTGAATGCCGCACATTCTTGTAGCCT TGCTGGCATCCTTGTATTTGAGGAAAGGATGACAGTctgaaaagacgccataatgatgccactg tctgaatctgtcttgaatatatcaaggagatcaaccactgaagcagggtaacatgcaatgttgc aagctgga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1391 Transcript exons: 12678512-12679006,12680110-12680331,12680402-12680505,12 680586-12680723,12680854-12681285 CTGAAAAGACGCCATAATGATGCCACTGTCTGAATCTGTCTTGAATATATCAAGGAGATCAACC ACTGAAGCAGGGTAACATGCAATGTTGCAAGCTGGATAACATCTATGAAGAATGAAACAGGAAC TGTTAAACCAAGAAGGATCCCAGAAAATGCAAGACCCCAAATTATGTGCCTTAGGAAGCCTCCC ACAATTGACCAAAGAGTTGAATATATCTGAATTGCATTAAGTGAAATCATGCCTAAAAGCTCTG CCAACTCTGTATTCAGCTTAAAGCCTGCTGGAACACCCATCAGCCACACACAGCCAGATCTCAA AACACTATCGGTCATGTAGTGAACAAGAGCAAAGGTCCAAGAACAAATTATCTCTGTTTTCAAC AATAGCACTACTCCAAGGAATAAACCAGTCAAGAGATCCATCACAATATTTGACCACAACATAT GCTTCTGAATTGCTGCTTTATGTGCATATTCAACATTCACAGTAGAGCTTAGGGATCTATCTTG CAGGATAATTGGCCAGTAGAGAATATGGCAGCAACGGAGATGCATGTTTTTCCATGAATGCCCA AAAACCTTTTGTAACATGAAGTACTGATATATATTGCTTAAATATTTTTGGAACACTTGAATGA AGATGTAGACGATAGTCGATATTGAAGCCAAAAGTATTCCCACGGAGTGCCATGTTACTTGAAC TATCGCAAAAACCACAGATGCAAAGAGAAAGCGAGCCACAGAATTACTGGTAGCAGCTTCCTGA GCAACTGATAGTCTAGCAGCATTTGAACAATTAAGTCCCAAAATAATTGGATCCAAATCAAATT CTAATCGTTTGCATTCTAGATTATTTATCCAATTTGGCTTTCTGAAGGAAGACTTTGATCTGCA AGGTGCATCCTCACCCAGGGAAAAATGGTTTCCACAAGCAGTTGGAACATCATATAGTACGACG TGGCAATGACTAGTCTCAAACTTCTGGTCATCAAGGCACAAATAATGAAGCACAGGGACTTGAT TCAGATTGCATTTCAAGCTCTTGCTAGACTTAAAGCACAAGTGCACCCTGTTGTGCTCTTTGAC TACTGACTTCTTGCAAGCATCCAGAAGACCATCTAAGATGCTACAATCATATTCCCATTTGCTA CTGTAGCCGCTTTGGTCTTGGGCTCCACTTTCCAATGATCCACTCGATACAACAGGACTGTTCT GGGTCATATAAAAATGCCCTTTTTGAACAGATTGAGTCCCCAATGGCTGATGATGTTGTTTACT ACAGCATACTTCAAATTCTCTTGGAAGATGCATACAATCCCCCAGAATGGTGAATGCCGCACAT TCTTGTAGCCTTGCTGGCATCCTTGTATTTGAGGAAAGGATGACAGT
Genomic sequence	CTGAAAAGACGCCATAATGATGCCACTGTCTGAATCTGTCTTGAATATATCAAGGAGATCAACC ACTGAAGCAGGGTAACATGCAATGTTGCAAGCTGGATAACATCTATGAAGAATGAAACAGGAAC TGTTAAACCAAGAAGGATCCCAGAAAATGCAAGACCCCAAATTATGTGCCTTAGGAAGCCTCCC ACAATTGACCAAAGAGTTGAATATATCTGAATTGCATTAAGTGAAATCATGCCTAAAAGCTCTG CCAACTCTGTATTCAGCTTAAAGCCTGCTGGAACACCCATCAGCCACACACAGCCAGATCTCAA AACACTATCGGTCATGTAGTGAACAAGAGCAAAGGTCCAAGAACAAATTATCTCTGTTTTCAAC AATAGCACTACTCCAAGGAATAAACCAGTCAAGAGATCCATCACAATATTTGACCACAACATAT GCTTCTGAATTGCTGCTTTATGTGCATATTCAACATTCACAGTAGAGCTACATAGCAAAAGCAA AGTGGAACAAACTGTAGTTGAAGATAAGCTTCTGCTACTCATAAAAAAGAATCAACTATAATTG AAGAGAAGTTTCACATAACTACATTTTGCTTTATCATCACTTAATAACTACAGAGTACTTCCTC CGGTTCCATAATACTTGTCATTTTAGACAAGGACACGGTCTCCAAAAAACCACTTTGACCATTA TTGTCTATTACAACATATATAGAAATATCAACAAATATATGATTTTATTAAAGTGTCATTCAAG ATTATTCTATACATATAGTTTCCATGTTTGTAAAGTAATATTTTAAGGGCTTGTTCGGATCACA GGATAGGAAAAACACAGCAATAATATAGGATTGCATATGCAAAACGTAGGATTGAAAAACATAG GAATTTGATGGTGTGGAGCGTTCGGAATACAGGAATATATAAACCATAGGAATTTTCCAATCAA CAGTAATCTCATAGATTATGGTCTAATTAAGCAATAAAATATTAGTTCCCATCTAGTCACTCCA ACGTGATTAGCATCCATCCCGTCGTACCTAATGAAAAAAATGAGGTTTGAGTAGATGTTCAAAA TCCTGTGAAATTCCTACGTTTTCACAGGGTTGCTATAGTATTCCTACAAAATTCCTACGCATGA TTCATTTGAACCGAATGCATAAACAGTATCAAATTCAAAGGAATCGCTAATCCTACAAAAATCA TGTGAAATCTCTCCATTCTTAACAATCCCTAAAATTTATTTATAGTCAAAGTTCTAAAAGTTTG ACCTCAGCCTTGTCCAAAACGAAAGTATTATGGAACCGGAGGGAGTACTAAATATAATTTCTCC TAATATTGGAAATTATAGAGGTTCTTTACATGACAGCTAACATAGAACAAAATATAGAAGCAAT TAGTTTACAATCATAGATTAAAAAATAAGGAACCTAAGTTTTGACTGTGCCACCATGCAACTGC AATATGGAATGCCATATGCCATCCTATCTAGCAACAGTAACTCCATTTGGCATGTCAAGATAAT TCACTAAAACAGTATAAAAGAAGCTAATACTTAACTACAGCAGCATCAAAAGTCAAGTTTACCT TAGGGATCTATCTTGCAGGATAATTGGCCAGTAGAGAATATGGCAGCAACGGAGATGCATGTTT TTCCATGAATGCCCAAAAACCTTTTGTAACATGAAGTACTGATATATATTGCTTAAATATTTTT GGAACACTTGAATGAAGATGTAGACGATAGTCGATATTGAAGCCAAAAGTATTCCCACGGAGTG CCATGTTACTTGAACTATCGCAAAAACCCTAAATGAATAGGAAGTAAGAAAGGTGCAAAGCAGT CGTACATCAAATATGATTAAGCAATGGTGCTTACACAGATGCAAAGAGAAAGCGAGCCACAGAA TTACTGGTAGCAGCTTCCTGAGCAACTGATAGTCTAGCAGCATTTGAACAATTAAGTCCCAAAA TAATTGGATCCTTTGGACAAAGATGTGAAACAGATCAGCCAATTACTAAAATTAAAATGTAACA GCGTATCAAAGCATTCATGCACATACCAAATCAAATTCTAATCGTTTGCATTCTAGATTATTTA TCCAATTTGGCTTTCTGAAGGAAGACTTTGATCTGCAAGGTGCATCCTCACCCAGGGAAAAATG GTTTCCACAAGCAGTTGGAACATCATATAGTACGACCTAAATAAATGATACAGCATTTATAAGT AACTCATCACAGGAACAAATCATTACTAGTGAGCAACAAAATTAAAATGGTTCAAGTTATGGTT AACAAATTATGTTCAGAAGTGAGAATTGACTTACATACGTGGCAATGACTAGTCTCAAACTTCT GGTCATCAAGGCACAAATAATGAAGCACAGGGACTTGATTCAGATTGCATTTCAAGCTCTTGCT AGACTTAAAGCACAAGTGCACCCTGTTGTGCTCTTTGACTACTGACTTCTTGCAAGCATCCAGA AGACCATCTAAGATGCTACAATCATATTCCCATTTGCTACTGTAGCCGCTTTGGTCTTGGGCTC CACTTTCCAATGATCCACTCGATACAACAGGACTGTTCTGGGTCATATAAAAATGCCCTTTTTG AACAGATTGAGTCCCCAATGGCTGATGATGTTGTTTACTACAGCATACTTCAAATTCTCTTGGA AGATGCATACAATCCCCCAGAATGGTGAATGCCGCACATTCTTGTAGCCTTGCTGGCATCCTTG TATTTGAGGAAAGGATGACAGT

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_006103* osi_circ_015252 						
					
						PMCS
						0.354673375

Conservation Information
Conserved circRNAs	osi_circ_006103* osi_circ_015252
PMCS	0.354673375

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							12681222-12678512(+)
12681260-12681116(-)
12678528-12681116(-)
						
						Potential amino acid sequence
						
							MVNAAHSCSLAGILVFEERMTV*(+)
MPARLQECAAFTILGDCMHLPREFEVCCSKQHHQPLGTQSVQKGHFYMTQNSPVVSSGSLESGA
QDQSGYSSKWEYDCSILDGLLDACKKSVVKEHNRVHLCFKSSKSLKCNLNQVPVLHYLCLDDQK
FETSHCHVVLYDVPTACGNHFSLGEDAPCRSKSSFRKPNWINNLECKRLEFDLDPIILGLNCSN
AARLSVAQEAATSNSVARFLFASVVFAIVQVTWHSVGILLASISTIVYIFIQVFQKYLSNIYQY
FMLQKVFGHSWKNMHLRCCHILYWPIILQDRSLSSTVNVEYAHKAAIQKHMLWSNIVMDLLTGL
FLGVVLLLKTEIICSWTFALVHYMTDSVLRSGCVWLMGVPAGFKLNTELAELLGMISLNAIQIY
STLWSIVGGFLRHIIWGLAFSGILLGLTVPVSFFIDVIQLATLHVTLLQWLISLIYSRQIQTVA
SLWRLFRLSSFPQIQGCQQGYKNVRHSPFWGIVCIFQENLKYAVVNNIISHWGLNLFKKGIFI*
(-)
MASFQTVILSSNTRMPARLQECAAFTILGDCMHLPREFEVCCSKQHHQPLGTQSVQKGHFYMTQ
NSPVVSSGSLESGAQDQSGYSSKWEYDCSILDGLLDACKKSVVKEHNRVHLCFKSSKSLKCNLN
QVPVLHYLCLDDQKFETSHCHVVLYDVPTACGNHFSLGEDAPCRSKSSFRKPNWINNLECKRLE
FDLDPIILGLNCSNAARLSVAQEAATSNSVARFLFASVVFAIVQVTWHSVGILLASISTIVYIF
IQVFQKYLSNIYQYFMLQKVFGHSWKNMHLRCCHILYWPIILQDRSLSSTVNVEYAHKAAIQKH
MLWSNIVMDLLTGLFLGVVLLLKTEIICSWTFALVHYMTDSVLRSGCVWLMGVPAGFKLNTELA
ELLGMISLNAIQIYSTLWSIVGGFLRHIIWGLAFSGILLGLTVPVSFFIDVIQLATLHVTLLQW
LISLIYSRQIQTVASLWRLFRLSSFPQIQGCQQGYKNVRHSPFWGIVCIFQENLKYAVVNNIIS
HWGLNLFKKGIFI*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	12681222-12678512(+) 12681260-12681116(-) 12678528-12681116(-)
Potential amino acid sequence	MVNAAHSCSLAGILVFEERMTV(+) MPARLQECAAFTILGDCMHLPREFEVCCSKQHHQPLGTQSVQKGHFYMTQNSPVVSSGSLESGA QDQSGYSSKWEYDCSILDGLLDACKKSVVKEHNRVHLCFKSSKSLKCNLNQVPVLHYLCLDDQK FETSHCHVVLYDVPTACGNHFSLGEDAPCRSKSSFRKPNWINNLECKRLEFDLDPIILGLNCSN AARLSVAQEAATSNSVARFLFASVVFAIVQVTWHSVGILLASISTIVYIFIQVFQKYLSNIYQY FMLQKVFGHSWKNMHLRCCHILYWPIILQDRSLSSTVNVEYAHKAAIQKHMLWSNIVMDLLTGL FLGVVLLLKTEIICSWTFALVHYMTDSVLRSGCVWLMGVPAGFKLNTELAELLGMISLNAIQIY STLWSIVGGFLRHIIWGLAFSGILLGLTVPVSFFIDVIQLATLHVTLLQWLISLIYSRQIQTVA SLWRLFRLSSFPQIQGCQQGYKNVRHSPFWGIVCIFQENLKYAVVNNIISHWGLNLFKKGIFI (-) MASFQTVILSSNTRMPARLQECAAFTILGDCMHLPREFEVCCSKQHHQPLGTQSVQKGHFYMTQ NSPVVSSGSLESGAQDQSGYSSKWEYDCSILDGLLDACKKSVVKEHNRVHLCFKSSKSLKCNLN QVPVLHYLCLDDQKFETSHCHVVLYDVPTACGNHFSLGEDAPCRSKSSFRKPNWINNLECKRLE FDLDPIILGLNCSNAARLSVAQEAATSNSVARFLFASVVFAIVQVTWHSVGILLASISTIVYIF IQVFQKYLSNIYQYFMLQKVFGHSWKNMHLRCCHILYWPIILQDRSLSSTVNVEYAHKAAIQKH MLWSNIVMDLLTGLFLGVVLLLKTEIICSWTFALVHYMTDSVLRSGCVWLMGVPAGFKLNTELA ELLGMISLNAIQIYSTLWSIVGGFLRHIIWGLAFSGILLGLTVPVSFFIDVIQLATLHVTLLQW LISLIYSRQIQTVASLWRLFRLSSFPQIQGCQQGYKNVRHSPFWGIVCIFQENLKYAVVNNIIS HWGLNLFKKGIFI*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os05g0290400_circ_g.2

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