Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G21630_circ_g.5 |
ID in PlantcircBase | ath_circ_003797 |
Alias | At_ciR844, Ath_circ_FC0468, Ath_circ_FC0469 |
Organism | Arabidpsis thaliana |
Position | chr1: 7585908-7586463 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, find_circ |
Parent gene | AT1G21630 |
Parent gene annotation |
Calcium-binding EF hand family protein |
Parent gene strand | + |
Alternative splicing | AT1G21630_circ_g.6 |
Support reads | 8/1 |
Tissues | leaf/root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G21630.3:2 AT1G21630.2:2 AT1G21630.4:2 AT1G21630.1:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.31320691 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ye et al., 2015;Chu et al., 2017;Chen et al., 2017a |