Splice junction sequence |
TCTCTCTCAGGCCGGTGGGTTTCCGGAGCCAGAGATTGTTCATTACAACCCGAAAGAGTTCGAC TTTGGGAAGAAGAAGGCATTCCCTTTCCGTGATCAGgaggatgcagttgatccgaagagcaggc acaaggggaagctggagactgagagcttactgcaatcaaaaggtgtaaactggacttctatacg tcctgtct
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 429 Transcript exons: 3017045-3017266,3017408-3017524,3017677-3017766 GAGGATGCAGTTGATCCGAAGAGCAGGCACAAGGGGAAGCTGGAGACTGAGAGCTTACTGCAAT CAAAAGGTGTAAACTGGACTTCTATACGTCCTGTCTACATCTACGGTCCATTGAATTACAACCC CGTCGAAGAATGGTTTTTCCACCGTCTAAAGGCAGGTCGCCCAATCCCGGTTCCAAACTCTGGG ATACAGATCTCACAACTCGGTCACGTTAAGGACTTGGCAACAGCCTTTCTCAACGTGCTTGGTA ACGAGAAAGCCAGCAGAGAGATATTCAACATCTCGGGGGAGAAATATGTTACCTTTGATGGGTT AGCAAAAGCTTGCGCAAAGGCCGGTGGGTTTCCGGAGCCAGAGATTGTTCATTACAACCCGAAA GAGTTCGACTTTGGGAAGAAGAAGGCATTCCCTTTCCGTGATCAG
|
Genomic sequence |
GAGGATGCAGTTGATCCGAAGAGCAGGCACAAGGGGAAGCTGGAGACTGAGAGCTTACTGCAAT CAAAAGGTGTAAACTGGACTTCTATACGTCCTGTCTACATCTACGGTCCATTGAATTACAACCC CGTCGAAGAATGGTTTTTCCACCGTCTAAAGGCAGGTCGCCCAATCCCGGTTCCAAACTCTGGG ATACAGATCTCACAACTCGGTCACGTTAAGGTCAGTCACACTTTCTCTAATTCTTGAGCTTCCT TTCATGTTCAGAAAACTCATTGTTATAGGGACCCACTGACTGAAACTCAGCTCTGATCAATCTT GAAGAGTATTGATCAATAACATCAAATCATTCTGTAATTTCAGGACTTGGCAACAGCCTTTCTC AACGTGCTTGGTAACGAGAAAGCCAGCAGAGAGATATTCAACATCTCGGGGGAGAAATATGTTA CCTTTGATGGGTTAGCAAAAGCTTGCGCAAAGGTACATTCTTTTCTATTGGCTTTATTGTTGTC TCATCAATCCAAATCGTTTCAAGTACATCCTGGTGTGGTCCGTTTGTAATAGATATCATACTCT GAGCTTTTTGGATCATTGCTTGAGTAAACTTATTCATGTTTTCAACTCTCTCTCAGGCCGGTGG GTTTCCGGAGCCAGAGATTGTTCATTACAACCCGAAAGAGTTCGACTTTGGGAAGAAGAAGGCA TTCCCTTTCCGTGATCAG |