Plant Circular RNA Database

Detail information of Solyc08g076030.2_circ_g.3

			
						 General Information
					
						CircRNA Name
						Solyc08g076030.2_circ_g.3
					
						ID in PlantcircBase
						sly_circ_002658
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr8: 60089356-60093223  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc08g076030.2						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Solyc08g076030.2_circ_g.1 Solyc08g076030.2_circ_g.2 						
					
						Support reads
						2
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc08g076030.2.1:3

General Information
CircRNA Name	Solyc08g076030.2_circ_g.3
ID in PlantcircBase	sly_circ_002658
Alias	NA
Organism	Solanum lycopersicum
Position	chr8: 60089356-60093223 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	CIRI
Parent gene	Solyc08g076030.2
Parent gene annotation	protein_coding
Parent gene strand	-
Alternative splicing	Solyc08g076030.2_circ_g.1 Solyc08g076030.2_circ_g.2
Support reads	2
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc08g076030.2.1:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTGTGCACCAAAGACCAGGAGCATCATAATCTACTCTTGATCCCATGCCATCATAAAGCCAAGC
TTTAATTTTACCATCAATAGCCGTAGAGAAAATAAActtaacattgacatcagaaagcgcacga
gaaccctcaaatgccctgctctccagcatcctcagcattcgctgtccatcagtatttgccagaa
ccttgatt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 528
Transcript exons: 60089356-60089520,60089605-60089839,60093096-60093223
CTTAACATTGACATCAGAAAGCGCACGAGAACCCTCAAATGCCCTGCTCTCCAGCATCCTCAGC
ATTCGCTGTCCATCAGTATTTGCCAGAACCTTGATTCCGTTATCACTCGTCGTGACAGCCAGCA
ATGAGCCTTCCTTATTGAATCTTAGTCTAGGACTAGCAGGCAATCCACCATCGCCATCAGTAGC
TGTAAGCATGTTGGTATTATCCATTTCCCAAAACTTTATCTGGAACTCATCACCCGCAGCCAAG
AAACGATTTCTCGTAGTATCAAACTGCACAACACCTAATGAACGCTTTCTAAAGCCAGAGAATG
TCCTCTTGATTGCTCCTTCACTCTCATTCCACTCTACAAGGTGGGATTCGCCTTCTTTACTTGT
CCCACAAGAGAAAAGTCTGGTTCCATCGGCACTATATGCCATTGTTGTGCACCAAAGACCAGGA
GCATCATAATCTACTCTTGATCCCATGCCATCATAAAGCCAAGCTTTAATTTTACCATCAATAG
CCGTAGAGAAAATAAA
						
					

						Genomic sequence
						
							CTTAACATTGACATCAGAAAGCGCACGAGAACCCTCAAATGCCCTGCTCTCCAGCATCCTCAGC
ATTCGCTGTCCATCAGTATTTGCCAGAACCTTGATTCCGTTATCACTCGTCGTGACAGCCAGCA
ATGAGCCTTCCTTATTGAATCTTAGTCTAGGACTAGCCTGAAAAGAAATATTGGTTTTCAAGAA
TTCTCAGTTTCAATAATGTCAATCAAACAAATGAATTCAAGTAACAGCAATACTTACAGGCAAT
CCACCATCGCCATCAGTAGCTGTAAGCATGTTGGTATTATCCATTTCCCAAAACTTTATCTGGA
ACTCATCACCCGCAGCCAAGAAACGATTTCTCGTAGTATCAAACTGCACAACACCTAATGAACG
CTTTCTAAAGCCAGAGAATGTCCTCTTGATTGCTCCTTCACTCTCATTCCACTCTACAAGGTGG
GATTCGCCTTCTTTACTTGTCCCACAAGAGAAAAGTCTGAAAGAAGGTGGAAAGGTTAAGAATG
ACTATAAAAAATCAAACGCAAACAAGTTTCTCTTGTTTCAGAGATCTTTCTCAAAAAAGTGTCT
CGTTTCAGACATTTATCATAAAATCCTGAAGGCCTTTTTACTATTCATTTTTCTACCTTCAATA
AGCATCATTCACTCATTCACTATTGCAGTCATATGTTCTATCATGACACCTTTGAGTATAAAAC
TCACCCTAGCGAGTCCTCCTCCGATGGCTTCAAGTTTTGCCTTGGGGGTGCACATAACTTAAGC
CCTTCTTCATTTTTTTGGGGCATTGGCATGTTTGATAAGAGTATTGAAGAAGGGACTTCCTAAA
ATTCTTAGGAATTTGAAAAGAGCTGTGGAAAATCTACTATAGGGATCACTCTACCAGGAGTATG
TATGAATTAAGAAAATAATATATGATATTGAAGTGTGTGACCATCTCATTTAAAAGTTAATTTA
TTAGAGAAAGCACACCAAATTTATTACATAATGTCTTTCAATGCACCATCTTAAGTGCGGCTTA
TTCTTTTTCACGAGTCAAGCACGTGGAGCTTCTCTTTGATAATGAATGACCATGAGATCTCTAC
TGCCATGTTTGAAGTGTGTGATCATATCCACCAACATAAGCTAGAGAGATACTTTTATATATTT
AATCATGTCTTTCAATAAAGAAACCGAAATTAGAGATAAAAGGAGGAACACCAATGAAATCACA
AACAGCAAAGGAATTAAAGATGATTGAGTTCAATACGAATTATGGCAGGTAAACGCAATTTTTT
GTTAACATCTACCAAAAGAAGCTATATTTTATTAGTTGGAGTGCACGCAGATAGCAGACTTAAC
AGCAGAAAAAATGGACAAGTATTGAACTATTGACTCAAACATAGGGAGCTGGCATTTCTGTTTG
CAAAAGACTAAGATAGACTGCTCGGACGTATCCTCAGTTGAAAAAATCTGGGCAAGATGGTTAG
ATTATGCAAACTTTTTGGACACAAAATGAATTGAACTTGACCAACAAGGCAGGTCACAGCCAGT
AGTAAGGTCTGAATAAACAATACTATATATGGCTTAGCTGAACAAAGGCAGGGGCGGACCCACC
TTGGCAAAAGGGGTGTCAAGCGACACCCCTTCGCCAGATAATTACATTGTAGGTAGGGGTCAAA
TTTTGGTTTGATAAATATATATATTGGTATTGACACCTCTTGATACAAGTAAAGGGTTTAGTCT
AGTGGTTAAGGGGTTGCAAAAACTCCTTAAGGTTGTGTGTTCAAGCCCTGCTAGGCACATATTA
TAATTACTTCTTTTTTTCAGCCAGCACTGATAGCAACAAGTCTGTACATATATTTCTCATGCTT
TATGCTGATGGCTCATATTTTGTGATGTTTTTCTTGATGAAGTCAACCTAGAGTAGGCATTAGG
CAATTAAGCATCTAAGCATTGTACTGTTGGTTTATTTGAGGAAAATTCTAGGTAGACTATAAAT
CTGACATAGAGCCATCCTTATCCCCATAAATGGCGAACAGAACAGTTCTTATGTAAAGGTGGTG
TCCAGGCCAGCTTGTGCACACCTAGACTATTCAACGGGTACCTATTACCTCCCACCAAGTCTAA
GCAGGTAAGGAGAAATCACCTAATGTTTTTTCGTCTATGCCAGGTGAAAAACTTTCATTAGTTA
GCAGCAATTAAAGGTTACGGAGATGGTTCCTTCCCTACCACTTAGCATGCATCCCCTTTGGACT
AAACACAAGGATGGGATTATATGGCAGGGAGGACTTGATAGGGTGGAAAAAGATATTCAAGGCG
AACGAGACAATATCACTCATTTTGGGGAAGAATTGTCCACATTGGGTTCTAGATAGCAACCAAC
ATATGTCATGTCTCTTTGCCCATTACCTGTTGAACTTAAGAGAAGACGTAAAAGTTTAGAAGGA
ACATGGACAAAGATACACTTCCATTAAACAAAAGAGTCCAGCAATACTACCAAAGAAAGTGAGA
GGTTTCGGTATACAAAAGTCAAAGACGGTATAATAAGATCATTTTATTTAAGTGAAACCAGATA
CTTGGTGGAGTCTAAAAATATCACTCTACTTTATTGGAGTTCTTAAACCTTGGTGCTGCAGTTT
GGAAGAGCATTAGGAACCTATGGAAGGATGTTCTTAAACTTCCAATTCTCAGCACGAAAAGTGG
ATGAAATTAAGATTTTGGCATGATGCTTGGGTTGGTCATACATCGCTAAACTGTTCAGTTTTGC
TCTTAATACTGAAGAGAAAGTAGCCCAATTCATCTCAATCTGGATGAAACCTACCTTTCGGTGG
GAACTTTGAAAATTGAGACATACACAGATCAGCCCAATTGTTAAAATAGCTAGCAGCTCTGCGT
ATAAAATAGTAAATGAATGACTCAATAAGATGGAAACACCTGGAGGATGGAAAATATTATTGTA
AACTGGTTGTAAATTGTTGTCGTCCTGTATTTAACAACCTATATAGTGACCTTATAAGTTGGAA
ATCTATCTGGGATAGTAGATCACCTTCTACAGTTGTTGGTCTTGGTCGGTTGGGTCTCATAAAA
TCCCAATTGACACAAGTTAATCAACAGAAAATAGGCACCAGCATATTCTAAGATGATTTATGTG
TGAAACGGAATGGGAAGATTTAAACCATCAATTAATTGAGCATCAAATTTCTGGATGATCCAGC
TTATGTAACTCAACTCAAGGAGTTCATTGAGTTGGACTGGACGAAAGCTGAGCACACAAGACGG
GAGGATTCACTACTCCAGTAAGTATTTTTGGGTGACTCGCTAAAAAGAGTCATAGGTGCTCCAA
TGGCAGGAGAAACCTGTCCATAGACCTTTTTTATAAGATGGGGTAGAAAACTTGTCCAGACTAG
TTAATATTTTTGTGCTTTCGGGTTTTTGGAATGACATGCTGAATGCATAATATACACAATCCAC
TTGAAAGAAAGTGCAGAAAGATAACACAAAAAAAACAAGAATAGAATGTGTTCTCTGAAATTTG
AAGATAAAGAAGCTAGTAGATTTAGAATCATACTATTTTAGCTTGATACAAGGATAGAGAAAAA
TGTAAAACCAAAATTTGCATCACTAGGATAAGATCTTATCGAAGAAAGAAAAGTAAGATTACAT
GCATTGCATAAAAATAGTCAAAGCTTCCTTGTTTGAACAAATAAAGGCCACTTACTAAACAAAG
ATTGAATTGTATCGGCTTTTGGACCAACCTGGTTCCATCGGCACTATATGCCATTGTTGTGCAC
CAAAGACCAGGAGCATCATAATCTACTCTTGATCCCATGCCATCATAAAGCCAAGCTTTAATTT
TACCATCAATAGCCGTAGAGAAAATAAA
						
					

			
		

Sequences
Splice junction sequence	TTGTGCACCAAAGACCAGGAGCATCATAATCTACTCTTGATCCCATGCCATCATAAAGCCAAGC TTTAATTTTACCATCAATAGCCGTAGAGAAAATAAActtaacattgacatcagaaagcgcacga gaaccctcaaatgccctgctctccagcatcctcagcattcgctgtccatcagtatttgccagaa ccttgatt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 528 Transcript exons: 60089356-60089520,60089605-60089839,60093096-60093223 CTTAACATTGACATCAGAAAGCGCACGAGAACCCTCAAATGCCCTGCTCTCCAGCATCCTCAGC ATTCGCTGTCCATCAGTATTTGCCAGAACCTTGATTCCGTTATCACTCGTCGTGACAGCCAGCA ATGAGCCTTCCTTATTGAATCTTAGTCTAGGACTAGCAGGCAATCCACCATCGCCATCAGTAGC TGTAAGCATGTTGGTATTATCCATTTCCCAAAACTTTATCTGGAACTCATCACCCGCAGCCAAG AAACGATTTCTCGTAGTATCAAACTGCACAACACCTAATGAACGCTTTCTAAAGCCAGAGAATG TCCTCTTGATTGCTCCTTCACTCTCATTCCACTCTACAAGGTGGGATTCGCCTTCTTTACTTGT CCCACAAGAGAAAAGTCTGGTTCCATCGGCACTATATGCCATTGTTGTGCACCAAAGACCAGGA GCATCATAATCTACTCTTGATCCCATGCCATCATAAAGCCAAGCTTTAATTTTACCATCAATAG CCGTAGAGAAAATAAA
Genomic sequence	CTTAACATTGACATCAGAAAGCGCACGAGAACCCTCAAATGCCCTGCTCTCCAGCATCCTCAGC ATTCGCTGTCCATCAGTATTTGCCAGAACCTTGATTCCGTTATCACTCGTCGTGACAGCCAGCA ATGAGCCTTCCTTATTGAATCTTAGTCTAGGACTAGCCTGAAAAGAAATATTGGTTTTCAAGAA TTCTCAGTTTCAATAATGTCAATCAAACAAATGAATTCAAGTAACAGCAATACTTACAGGCAAT CCACCATCGCCATCAGTAGCTGTAAGCATGTTGGTATTATCCATTTCCCAAAACTTTATCTGGA ACTCATCACCCGCAGCCAAGAAACGATTTCTCGTAGTATCAAACTGCACAACACCTAATGAACG CTTTCTAAAGCCAGAGAATGTCCTCTTGATTGCTCCTTCACTCTCATTCCACTCTACAAGGTGG GATTCGCCTTCTTTACTTGTCCCACAAGAGAAAAGTCTGAAAGAAGGTGGAAAGGTTAAGAATG ACTATAAAAAATCAAACGCAAACAAGTTTCTCTTGTTTCAGAGATCTTTCTCAAAAAAGTGTCT CGTTTCAGACATTTATCATAAAATCCTGAAGGCCTTTTTACTATTCATTTTTCTACCTTCAATA AGCATCATTCACTCATTCACTATTGCAGTCATATGTTCTATCATGACACCTTTGAGTATAAAAC TCACCCTAGCGAGTCCTCCTCCGATGGCTTCAAGTTTTGCCTTGGGGGTGCACATAACTTAAGC CCTTCTTCATTTTTTTGGGGCATTGGCATGTTTGATAAGAGTATTGAAGAAGGGACTTCCTAAA ATTCTTAGGAATTTGAAAAGAGCTGTGGAAAATCTACTATAGGGATCACTCTACCAGGAGTATG TATGAATTAAGAAAATAATATATGATATTGAAGTGTGTGACCATCTCATTTAAAAGTTAATTTA TTAGAGAAAGCACACCAAATTTATTACATAATGTCTTTCAATGCACCATCTTAAGTGCGGCTTA TTCTTTTTCACGAGTCAAGCACGTGGAGCTTCTCTTTGATAATGAATGACCATGAGATCTCTAC TGCCATGTTTGAAGTGTGTGATCATATCCACCAACATAAGCTAGAGAGATACTTTTATATATTT AATCATGTCTTTCAATAAAGAAACCGAAATTAGAGATAAAAGGAGGAACACCAATGAAATCACA AACAGCAAAGGAATTAAAGATGATTGAGTTCAATACGAATTATGGCAGGTAAACGCAATTTTTT GTTAACATCTACCAAAAGAAGCTATATTTTATTAGTTGGAGTGCACGCAGATAGCAGACTTAAC AGCAGAAAAAATGGACAAGTATTGAACTATTGACTCAAACATAGGGAGCTGGCATTTCTGTTTG CAAAAGACTAAGATAGACTGCTCGGACGTATCCTCAGTTGAAAAAATCTGGGCAAGATGGTTAG ATTATGCAAACTTTTTGGACACAAAATGAATTGAACTTGACCAACAAGGCAGGTCACAGCCAGT AGTAAGGTCTGAATAAACAATACTATATATGGCTTAGCTGAACAAAGGCAGGGGCGGACCCACC TTGGCAAAAGGGGTGTCAAGCGACACCCCTTCGCCAGATAATTACATTGTAGGTAGGGGTCAAA TTTTGGTTTGATAAATATATATATTGGTATTGACACCTCTTGATACAAGTAAAGGGTTTAGTCT AGTGGTTAAGGGGTTGCAAAAACTCCTTAAGGTTGTGTGTTCAAGCCCTGCTAGGCACATATTA TAATTACTTCTTTTTTTCAGCCAGCACTGATAGCAACAAGTCTGTACATATATTTCTCATGCTT TATGCTGATGGCTCATATTTTGTGATGTTTTTCTTGATGAAGTCAACCTAGAGTAGGCATTAGG CAATTAAGCATCTAAGCATTGTACTGTTGGTTTATTTGAGGAAAATTCTAGGTAGACTATAAAT CTGACATAGAGCCATCCTTATCCCCATAAATGGCGAACAGAACAGTTCTTATGTAAAGGTGGTG TCCAGGCCAGCTTGTGCACACCTAGACTATTCAACGGGTACCTATTACCTCCCACCAAGTCTAA GCAGGTAAGGAGAAATCACCTAATGTTTTTTCGTCTATGCCAGGTGAAAAACTTTCATTAGTTA GCAGCAATTAAAGGTTACGGAGATGGTTCCTTCCCTACCACTTAGCATGCATCCCCTTTGGACT AAACACAAGGATGGGATTATATGGCAGGGAGGACTTGATAGGGTGGAAAAAGATATTCAAGGCG AACGAGACAATATCACTCATTTTGGGGAAGAATTGTCCACATTGGGTTCTAGATAGCAACCAAC ATATGTCATGTCTCTTTGCCCATTACCTGTTGAACTTAAGAGAAGACGTAAAAGTTTAGAAGGA ACATGGACAAAGATACACTTCCATTAAACAAAAGAGTCCAGCAATACTACCAAAGAAAGTGAGA GGTTTCGGTATACAAAAGTCAAAGACGGTATAATAAGATCATTTTATTTAAGTGAAACCAGATA CTTGGTGGAGTCTAAAAATATCACTCTACTTTATTGGAGTTCTTAAACCTTGGTGCTGCAGTTT GGAAGAGCATTAGGAACCTATGGAAGGATGTTCTTAAACTTCCAATTCTCAGCACGAAAAGTGG ATGAAATTAAGATTTTGGCATGATGCTTGGGTTGGTCATACATCGCTAAACTGTTCAGTTTTGC TCTTAATACTGAAGAGAAAGTAGCCCAATTCATCTCAATCTGGATGAAACCTACCTTTCGGTGG GAACTTTGAAAATTGAGACATACACAGATCAGCCCAATTGTTAAAATAGCTAGCAGCTCTGCGT ATAAAATAGTAAATGAATGACTCAATAAGATGGAAACACCTGGAGGATGGAAAATATTATTGTA AACTGGTTGTAAATTGTTGTCGTCCTGTATTTAACAACCTATATAGTGACCTTATAAGTTGGAA ATCTATCTGGGATAGTAGATCACCTTCTACAGTTGTTGGTCTTGGTCGGTTGGGTCTCATAAAA TCCCAATTGACACAAGTTAATCAACAGAAAATAGGCACCAGCATATTCTAAGATGATTTATGTG TGAAACGGAATGGGAAGATTTAAACCATCAATTAATTGAGCATCAAATTTCTGGATGATCCAGC TTATGTAACTCAACTCAAGGAGTTCATTGAGTTGGACTGGACGAAAGCTGAGCACACAAGACGG GAGGATTCACTACTCCAGTAAGTATTTTTGGGTGACTCGCTAAAAAGAGTCATAGGTGCTCCAA TGGCAGGAGAAACCTGTCCATAGACCTTTTTTATAAGATGGGGTAGAAAACTTGTCCAGACTAG TTAATATTTTTGTGCTTTCGGGTTTTTGGAATGACATGCTGAATGCATAATATACACAATCCAC TTGAAAGAAAGTGCAGAAAGATAACACAAAAAAAACAAGAATAGAATGTGTTCTCTGAAATTTG AAGATAAAGAAGCTAGTAGATTTAGAATCATACTATTTTAGCTTGATACAAGGATAGAGAAAAA TGTAAAACCAAAATTTGCATCACTAGGATAAGATCTTATCGAAGAAAGAAAAGTAAGATTACAT GCATTGCATAAAAATAGTCAAAGCTTCCTTGTTTGAACAAATAAAGGCCACTTACTAAACAAAG ATTGAATTGTATCGGCTTTTGGACCAACCTGGTTCCATCGGCACTATATGCCATTGTTGTGCAC CAAAGACCAGGAGCATCATAATCTACTCTTGATCCCATGCCATCATAAAGCCAAGCTTTAATTT TACCATCAATAGCCGTAGAGAAAATAAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.507431086

Conservation Information
Conserved circRNAs	NA
PMCS	0.507431086

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							60093171-60089358(-)
60089371-60093156(-)
						
						Potential amino acid sequence
						
							MGSRVDYDAPGLWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIKRTFSGFRKRSLGVV
QFDTTRNRFLAAGDEFQIKFWEMDNTNMLTATDGDGGLPASPRLRFNKEGSLLAVTTSDNGIKV
LANTDGQRMLRMLESRAFEGSRALSDVNVKFIFSTAIDGKIKAWLYDGMGSRVDYDAPGLWCTT
MAYSADGTRLFSCGTSKEGESHLVEWNESEGAIKRTFSGFRKRSLGVVQFDTTRNRFLAAGDEF
QIKFWEMDNTNMLTATDGDGGLPASPRLRFNKEGSLLAVTTSDNGIKVLANTDGQRMLRMLESR
AFEGSRALSDVNVKFIFSTAIDGKIKAWLYDGMGSRVDYDAPGLWCTTMAYSADGTRLFSCGTS
KEGESHLVEWNESEGAIKRTFSGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWEMDNTNMLTAT
DGDGGLPASPRLRFNKEGSLLAVTTSDNGIKVLANTDGQRMLRMLESRAFEGSRALSDVNVKFI
FSTAIDGKIKAWLYDGMGSRVDYDAPGLWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGA
IKRTFSGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWEMDNTNMLTATDGDGGLPASPRLRFNK
EGSLLAVTTSDNGIKVLANTDGQRMLRMLESRAFEGSRALSDVNVK(-)
MSMLSLFSLRLLMVKLKLGFMMAWDQE*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	60093171-60089358(-) 60089371-60093156(-)
Potential amino acid sequence	MGSRVDYDAPGLWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIKRTFSGFRKRSLGVV QFDTTRNRFLAAGDEFQIKFWEMDNTNMLTATDGDGGLPASPRLRFNKEGSLLAVTTSDNGIKV LANTDGQRMLRMLESRAFEGSRALSDVNVKFIFSTAIDGKIKAWLYDGMGSRVDYDAPGLWCTT MAYSADGTRLFSCGTSKEGESHLVEWNESEGAIKRTFSGFRKRSLGVVQFDTTRNRFLAAGDEF QIKFWEMDNTNMLTATDGDGGLPASPRLRFNKEGSLLAVTTSDNGIKVLANTDGQRMLRMLESR AFEGSRALSDVNVKFIFSTAIDGKIKAWLYDGMGSRVDYDAPGLWCTTMAYSADGTRLFSCGTS KEGESHLVEWNESEGAIKRTFSGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWEMDNTNMLTAT DGDGGLPASPRLRFNKEGSLLAVTTSDNGIKVLANTDGQRMLRMLESRAFEGSRALSDVNVKFI FSTAIDGKIKAWLYDGMGSRVDYDAPGLWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGA IKRTFSGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWEMDNTNMLTATDGDGGLPASPRLRFNK EGSLLAVTTSDNGIKVLANTDGQRMLRMLESRAFEGSRALSDVNVK(-) MSMLSLFSLRLLMVKLKLGFMMAWDQE*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016

circRNA

Detail information of Solyc08g076030.2_circ_g.3

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