Detail information of BGIOSGA037784_circ_g.1


General Information
CircRNA Name BGIOSGA037784_circ_g.1
ID in PlantcircBase osi_circ_003525
Alias 12:21614025|21614182
Organism Oryza sativa ssp. indica
Position chr12: 21614025-21614182  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA037784
Parent gene annotation NA
Parent gene strand +
Alternative splicing NA
Support reads NA
Tissues leaf
Exon boundary   No-No
Splicing signals   CT-AC
Number of exons covered BGIOSGA037784-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GAATCGGCTATCATTAACAAATTTGAGACCGTGGACACATTGAAGGAGGATAGCAAGAATGGTT
TGGTTGATGTTGCTCcaaagaaaagaaacagaagaagaagaaaagcaagaaacaagaaaacgac
gaggatgtcgaagctaggctggaaaaggca
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CAAAGAAAAGAAACAGAAGAAGAAGAAAAGCAAGAAACAAGAAAACGACGAGGATGTCGAAGCT
AGGCTGGAAAAGGCAGAATCGGCTATCATTAACAAATTTGAGACCGTGGACACATTGAAGGAGG
ATAGCAAGAATGGTTTGGTTGATGTTGCTC
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021