Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G12790_circ_g.1 |
ID in PlantcircBase | ath_circ_002291 |
Alias | 1:4359580-4359746 |
Organism | Arabidpsis thaliana |
Position | chr1: 4359580-4359746 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G12790 |
Parent gene annotation |
Protein PARTING DANCERS |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 1/1 |
Tissues | seedling;leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G12790.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.19952565 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |