Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G07745_circ_g.1 |
ID in PlantcircBase | ath_circ_001185 |
Alias | At_ciR3250, Ath_circ_FC0234, AT1G07745_C1 |
Organism | Arabidpsis thaliana |
Position | chr1: 2402081-2402458 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, KNIFE, PcircRNA_finder, circRNA_finder, find_circ, CIRI2 |
Parent gene | AT1G07745 |
Parent gene annotation |
DNA repair protein RAD51 homolog 4 |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 2/2 |
Tissues | leaf/root, whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G07745.1:2 AT1G07745.2:2 AT1G07745.3:2 AT1G07745.5:2 AT1G07745.4:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.409942681 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | response to drought stress |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017;Chen et al., 2017a;Zhang et al., 2019 |