Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA024057_circ_ag.1 |
ID in PlantcircBase | osi_circ_017231 |
Alias | Chr07:23459548_23477620(ZS97RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr7: 20981186-20999259 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ag-circRNA |
Identification method | CIRI2 |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | BGIOSGA024057_circ_igg.1 BGIOSGA024057_circ_g.1 BGIOSGA024057_circ_igg.2 BGIOSGA024057_circ_g.3 BGIOSGA024057_circ_g.4 BGIOSGA024057_circ_igg.5 BGIOSGA024057_circ_ig.1 BGIOSGA024057_circ_ig.2 BGIOSGA024057_circ_ig.3 BGIOSGA024056_circ_g.1 BGIOSGA024056_circ_igg.1 BGIOSGA024056_circ_g.2 BGIOSGA024056_circ_g.3 BGIOSGA024056_circ_g.4 BGIOSGA024056_circ_ig.1 BGIOSGA024056_circ_ig.2 BGIOSGA024056_circ_ig.3 BGIOSGA024056_circ_ig.4 BGIOSGA024056_circ_ig.5 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | NA-NA |
Splicing signals | CT-TA |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | osa-miR2871a-3p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |