Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT3G02600_circ_g.2 |
ID in PlantcircBase | ath_circ_019355 |
Alias | 3:553793-553981 |
Organism | Arabidpsis thaliana |
Position | chr3: 553793-553981 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT3G02600 |
Parent gene annotation |
Putative lipid phosphate phosphatase 3, chloroplastic |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 1/1/2 |
Tissues | root;flower |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT3G02600.11:1 AT3G02600.1:1 AT3G02600.8:1 AT3G02600.5:1 AT3G02600.4:1 AT3G02600.9:1 AT3G02600.12:1 AT3G02600.6:1 AT3G02600.3:1 AT3G02600.7:1 AT3G02600.2:1 AT3G02600.10:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.517009441 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |