Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d000011_circ_g.1 |
| ID in PlantcircBase | zma_circ_010406 |
| Alias | Zm_ctg_circ00012 |
| Organism | Zea mays |
| Position | chrB73V4_ctg150: 728971-733482 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | u-circRNA |
| Identification method | CIRI2 |
| Parent gene | Zm00001d000011 |
| Parent gene annotation |
glyoxalase I homolog |
| Parent gene strand | - |
| Alternative splicing | NA |
| Support reads | NA |
| Tissues | leaf, endosperm |
| Exon boundary | No-Yes |
| Splicing signals | CT-AC |
| Number of exons covered | Zm00001d000011_T014:7 Zm00001d000011_T005:7 Zm00001d000011_T002:5 Zm00001d000011_T018:4 Zm00001d000011_T025:5 Zm00001d000011_T006:8 Zm00001d000011_T020:10 Zm00001d000011_T019:10 Zm00001d000011_T023:6 Zm00001d000011_T011:5 Zm00001d000011_T001:4 Zm00001d000011_T024:8 Zm00001d000011_T009:9 Zm00001d000011_T016:5 Zm00001d000011_T022:6 Zm00001d000011_T021:6 Zm00001d000011_T017:4 Zm00001d000011_T007:9 Zm00001d000011_T010:7 Zm00001d000011_T003:7 Zm00001d000011_T013:8 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.094643104 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Han et al., 2020 |