Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d000011_circ_g.1 |
ID in PlantcircBase | zma_circ_010406 |
Alias | Zm_ctg_circ00012 |
Organism | Zea mays |
Position | chrB73V4_ctg150: 728971-733482 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI2 |
Parent gene | Zm00001d000011 |
Parent gene annotation |
glyoxalase I homolog |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, endosperm |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d000011_T014:7 Zm00001d000011_T005:7 Zm00001d000011_T002:5 Zm00001d000011_T018:4 Zm00001d000011_T025:5 Zm00001d000011_T006:8 Zm00001d000011_T020:10 Zm00001d000011_T019:10 Zm00001d000011_T023:6 Zm00001d000011_T011:5 Zm00001d000011_T001:4 Zm00001d000011_T024:8 Zm00001d000011_T009:9 Zm00001d000011_T016:5 Zm00001d000011_T022:6 Zm00001d000011_T021:6 Zm00001d000011_T017:4 Zm00001d000011_T007:9 Zm00001d000011_T010:7 Zm00001d000011_T003:7 Zm00001d000011_T013:8 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.094643104 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Han et al., 2020 |