Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT4G02890_circ_g.1 |
ID in PlantcircBase | ath_circ_029469 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr4: 1278933-1279160 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | circRNA_finder, find_circ, CIRI-full |
Parent gene | AT4G02890 |
Parent gene annotation |
Polyubiquitin 14 |
Parent gene strand | - |
Alternative splicing | AT4G02890_circ_g.2 AT4G02890_circ_g.3 AT4G02890_circ_g.4 AT4G02890_circ_g.5 |
Support reads | 21 |
Tissues | leaf, aerial, inflorescences, whole_plant |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT4G02890.1:1 AT4G02890.4:1 AT4G02890.2:1 AT4G02890.3:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 1.41557739 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |