Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d035543_circ_g.1 |
ID in PlantcircBase | zma_circ_005159 |
Alias | cold_test_circ_003928 |
Organism | Zea mays |
Position | chr6: 31734449-31734606 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d035543 |
Parent gene annotation |
Glycine-rich protein A3; Glycine/proline-rich family protein iso form 1; Glycine/proline-rich family protein isoform 2 |
Parent gene strand | - |
Alternative splicing | Zm00001d035542_circ_ag.1 Zm00001d035543_circ_g.2 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-No |
Splicing signals | CT-CA |
Number of exons covered | Zm00001d035543_T001:1 Zm00001d035543_T003:2 Zm00001d035543_T002:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.194007048 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |