Plant Circular RNA Database

Detail information of Zm00001d037950_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d037950_circ_g.1
					
						ID in PlantcircBase
						zma_circ_009079
					
						Alias
						zma_circ_0002350
					
						Organism
						
							Zea mays						
					
						Position
						
							chr6: 143302039-143305174  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d037950						
					
						Parent gene annotation
						
							Serine/threonine-protein kinase TOR
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d037950_T010:9
Zm00001d037950_T007:9
Zm00001d037950_T011:9
Zm00001d037950_T005:9
Zm00001d037950_T012:9
Zm00001d037950_T019:9
Zm00001d037950_T022:9
Zm00001d037950_T001:9
Zm00001d037950_T015:9
Zm00001d037950_T016:9
Zm00001d037950_T008:9
Zm00001d037950_T002:9
Zm00001d037950_T006:9
Zm00001d037950_T020:9
Zm00001d037950_T004:9
Zm00001d037950_T017:9

General Information
CircRNA Name	Zm00001d037950_circ_g.1
ID in PlantcircBase	zma_circ_009079
Alias	zma_circ_0002350
Organism	Zea mays
Position	chr6: 143302039-143305174 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d037950
Parent gene annotation	Serine/threonine-protein kinase TOR
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d037950_T010:9 Zm00001d037950_T007:9 Zm00001d037950_T011:9 Zm00001d037950_T005:9 Zm00001d037950_T012:9 Zm00001d037950_T019:9 Zm00001d037950_T022:9 Zm00001d037950_T001:9 Zm00001d037950_T015:9 Zm00001d037950_T016:9 Zm00001d037950_T008:9 Zm00001d037950_T002:9 Zm00001d037950_T006:9 Zm00001d037950_T020:9 Zm00001d037950_T004:9 Zm00001d037950_T017:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTGCCATCACTTCCATGAATTGTCAGCTTTCTTGGCCTTTGTTTGGACGTTATAACAATCAATT
GGGGAACAAAATACTCAATCGTCACAAGTGGTGAATccgacatagttttggcacaaattttcgt
gtgaagtcgcttggagtatgagcttctgaacctgaaccttcactgagagaccaggttgggcatc
ccgggcat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1258
Transcript exons: 143302039-143302304,143302393-143302566,143303049-143303
183,143303585-143303657,143303745-143303806,143303879-14
3303962,143304048-143304176,143304261-143304434,14330501
4-143305174
CCGACATAGTTTTGGCACAAATTTTCGTGTGAAGTCGCTTGGAGTATGAGCTTCTGAACCTGAA
CCTTCACTGAGAGACCAGGTTGGGCATCCCGGGCATCTCCTGAAGCCAAATGCTCACTGCCATG
TTGGATAGAGCTACCTGCTCCAGCCAAAGCTGACCCAGAAGAGAAGTCACGCCCTGTTAGTTTG
TCACTCATCCGTGCCATCACAGCTACAGCACGCTCATTCAAAACCTCATTGGCATCACCGAGTT
GATTGACAGCCTGTAGCAGTTCCCTCTCACGTGCTCCTCGCTGAGGTTGCATGAGCTCTCGGTT
AGCCACTGCTTCTTCACTACTGACAACCGTGTGAGCATGAACATTACCATAGTTCGACACTTGA
GGAACCTCATTGAAATTGAACAGACGCCAATTGATTAACGGGTCATGTACAAATGCCTCCATCA
TGGCCATAACGCTGTCTCTGTTTGTGCGAAGGACTTGCATCACATTTTCACAAGTTGTTCGGAA
TGTACCCTCAATACCGCTAACTTCCATAGCTTTCACAAGCATTCGAGTCAAACGGAATGGTACT
TTTTCAGGGAACTTTTCTCGATTCATTGAAGCCTCAAAGCAATCTCCGAAGTCGATGTGTAATA
TTTTTCCACTATAGCGATCTAACATAAGGTTGCTTGGATGCCGATCTCCTAAACCAAGCAAATA
CCCAACCATGCTCATAACAGCCAGGCTTCTAGCGTAGTTTGTGCGGCGCTCAAGCCATACTTCC
GAAGTTCGACTCTTCAGCCACAGAACCTTCGCAAGGTCATTTCCCTCAGTATTTTGCAAAGCAT
GCTGAAACACTTCCACCTTTGCAATGAGGGGTAAGTGATCATAATCGGGTGCAAAAGCCAACAT
AAGTCTGTGCTCCTGATTCAAGAAAATCTTCCTGGCATCTCTGTATTCACGGATCAGAGCATGA
AGTGTGTCACAGTTTGGAACCCATCCAATTAAACCACTGTTAGGTGACAAAGGTATAACAGCAT
ATCTTTGGATTGATAAATCCTTCTCTGATGTTTTCCTTGAGTTCTCTAGGAGAGTATTCACCAA
ACCAAAAAGCTGCATTACTCGTTCATCTTGCCGCAAATCTTCGTGGCCTTTAAGCAAGAATGCA
TAATCATTGCCATCACTTCCATGAATTGTCAGCTTTCTTGGCCTTTGTTTGGACGTTATAACAA
TCAATTGGGGAACAAAATACTCAATCGTCACAAGTGGTGAAT
						
					

						Genomic sequence
						
							CCGACATAGTTTTGGCACAAATTTTCGTGTGAAGTCGCTTGGAGTATGAGCTTCTGAACCTGAA
CCTTCACTGAGAGACCAGGTTGGGCATCCCGGGCATCTCCTGAAGCCAAATGCTCACTGCCATG
TTGGATAGAGCTACCTGCTCCAGCCAAAGCTGACCCAGAAGAGAAGTCACGCCCTGTTAGTTTG
TCACTCATCCGTGCCATCACAGCTACAGCACGCTCATTCAAAACCTCATTGGCATCACCGAGTT
GATTGACAGCCTGCATGGACAAAATTAATGGTTACTCATCCAGGTGAGTGGTCGGGTTTAGTGC
AATCAGACCACGAGGATGGAGAAGAGCAGGTAACCTGTAGCAGTTCCCTCTCACGTGCTCCTCG
CTGAGGTTGCATGAGCTCTCGGTTAGCCACTGCTTCTTCACTACTGACAACCGTGTGAGCATGA
ACATTACCATAGTTCGACACTTGAGGAACCTCATTGAAATTGAACAGACGCCAATTGATTAACG
GGTCATGTACAAATGCCTGGGGAGAGCAAAAGCAAAATATTTAAAATGCTTAATAAGCACAAGA
TCGCCAAGCATGTAGGTAGGTGGTACAAATAACACACACAACGAAGAACTGAAGACAAAAGGAT
ATAGTCATCTTCCTATTGTGTTCTCCAAACAATCCCCCATTACAAAATCAGACCGTTGTAGAAA
CATTGGGAGCATCAACTCAAAATATAGTACACAGATATGACAAATTAGTCTGCTATTTAATTTC
TGCTAAATAAGGATACACATTTCTTTAGTGAGTGACATCTTGTTTTATCTAATCAAGCTCTTGA
TTTCTGATTGAATCCAGCCTTAAGAAAACTAACTCCTAACCATTATTTATTTTTTTACTTTTCA
GAATCTGTACTAGTAATAAAAATAACAGCGGCATCTGAAGTGAAGAAACTAAAGATTTCTCCAA
GATATACGCTATGCAATAGGGTCATACGGAAAATAAGGTGATAATCTCACCTCCATCATGGCCA
TAACGCTGTCTCTGTTTGTGCGAAGGACTTGCATCACATTTTCACAAGTTGTTCGGAATGTACC
CTCAATACCGCTAACTTCCATAGCTTTCACAAGCATTCGAGTCAAACGGAATGGTACCTACACC
GTACATTGCAAACTGGTAAGATACTGTCACAAACAAAAATGTAATGTCTAAGTCACAGTGAGGA
GTACAAGTCATGAACACATTTCTAAATGTTAAACGTGCCTCCAAAAAGGCAAGTACATACTTTG
ACCACTAATTTCTCTTATAGTCTATCAATATAAAGTCTCAAGCATGGACTACTGATTTCTCTAG
TATATTGTCCACGATAATAAAATCTTAATCATAAGAAAACACTTTCGAATCAAATGGTGCAAAG
TTTGTATCGTGCAATCTACACACTGGTATATTAATTTCTGGCCAAAGTTTATAAAGTTTGAAAG
TTGAAACACCTACACCTTATAAAAAGAAAGTGAGGGAATAATTAAGGTATAATGCACACAGCAA
GATTACTTACTTTTTCAGGGAACTTTTCTCGATTCATTGAAGCCTCAAAGCAATCTCCGAAGTC
GATGTGTAATATTTTTCCACTGAAGAAAAAAGAACAATTTTATTACAGAAGTAACCGCATAATG
CATACACTATACACTAATGGAAGAATAGTTCTGAAGATGTACCTATAGCGATCTAACATAAGGT
TGCTTGGATGCCGATCTCCTAAACCAAGCAAATACCCAACCTGAAAATTACCTTTTCAGCATCT
TAAAGTAATCAAGATTCCATTTGAAAATCAGAAGAAAGTAGCCCATACCATGCTCATAACAGCC
AGGCTTCTAGCGTAGTTTGTGCGGCGCTCAAGCCATACTTCCGAAGTTCGACTCTTCAGCCACA
GAACCTGCCACAGTTTATTTATATAGAATGAGGCTACAACATCGTAAATATAAAGGACATACTC
ATTAAGAGAAGATACATAACAATACCTTCGCAAGGTCATTTCCCTCAGTATTTTGCAAAGCATG
CTGAAACACTTCCACCTTTGCAATGAGGGGTAAGTGATCATAATCGGGTGCAAAAGCCAACATA
AGTCTGTGCTCCTGATTCAAGAAAATCTGGACACGGAAACAAACACTAATTGCTAAATAAAATA
AATCAAATATATATAGCTACGAGACAAGAGAATACAGCAAACAAACCTTCCTGGCATCTCTGTA
TTCACGGATCAGAGCATGAAGTGTGTCACAGTTTGGAACCCATCCAATTAAACCACTGTTAGGT
GACAAAGGTATAACAGCATATCTTTGGATTGATAAATCCTTCTCTGATGTTTTCCTTGAGTTCT
CTAGGAGAGTATTCACCAAACCAAAAAGCTAAATGGAGAAGAAAGGAAATTAGATATTGTACAA
GAACAAAATTACACAAAAAAAGTAAACAAGAGGTAATATTTTATGCTATTTTCACGATCAAGAA
TAGCATTGAAACTAGTAAATTATTCTTATGTGATAATAACTGAATGCCCAAGAGACTCAAGTTC
CCTTGCTGTGCTTTTCAGAATCACAGTTGGGATAAGACAGTGCTATTTATGCATAGATCATACA
GCCACGGCAAACTGCCATTGCAATTTTTCACCTAGTTTCAGAATTAGTATCACATTGCTCATTT
GATGTTTTTTTTAATGGAGACTTGAACAGAATTTGTCAAAGATATCCTTGGTCTCAACTAAAAA
GCAAGATCAATACTGCTGACGCATAAGATAACTGCACTGCACAAATGTAAACCCTCAGCTCCAC
TAAGATTTATTTTATTTTAGAACAAAAGGAGCTGGGGCGCTGGGCTATCACAATTTTGTGGGCG
CACTACACAAAGATATGAGTGCTAATCAAGCCTACATTACTAACAAAAGAACCAATTAAATCAG
TATAAAAAGGATATGCCATCAAAATACAAACCTGCATTACTCGTTCATCTTGCCGCAAATCTTC
GTGGCCTTTAAGCAAGAATGCATAATCATTGCCATCACTTCCATGAATTGTCAGCTTTCTTGGC
CTTTGTTTGGACGTTATAACAATCAATTGGGGAACAAAATACTCAATCGTCACAAGTGGTGAAT
						
					

			
		

Sequences
Splice junction sequence	TTGCCATCACTTCCATGAATTGTCAGCTTTCTTGGCCTTTGTTTGGACGTTATAACAATCAATT GGGGAACAAAATACTCAATCGTCACAAGTGGTGAATccgacatagttttggcacaaattttcgt gtgaagtcgcttggagtatgagcttctgaacctgaaccttcactgagagaccaggttgggcatc ccgggcat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1258 Transcript exons: 143302039-143302304,143302393-143302566,143303049-143303 183,143303585-143303657,143303745-143303806,143303879-14 3303962,143304048-143304176,143304261-143304434,14330501 4-143305174 CCGACATAGTTTTGGCACAAATTTTCGTGTGAAGTCGCTTGGAGTATGAGCTTCTGAACCTGAA CCTTCACTGAGAGACCAGGTTGGGCATCCCGGGCATCTCCTGAAGCCAAATGCTCACTGCCATG TTGGATAGAGCTACCTGCTCCAGCCAAAGCTGACCCAGAAGAGAAGTCACGCCCTGTTAGTTTG TCACTCATCCGTGCCATCACAGCTACAGCACGCTCATTCAAAACCTCATTGGCATCACCGAGTT GATTGACAGCCTGTAGCAGTTCCCTCTCACGTGCTCCTCGCTGAGGTTGCATGAGCTCTCGGTT AGCCACTGCTTCTTCACTACTGACAACCGTGTGAGCATGAACATTACCATAGTTCGACACTTGA GGAACCTCATTGAAATTGAACAGACGCCAATTGATTAACGGGTCATGTACAAATGCCTCCATCA TGGCCATAACGCTGTCTCTGTTTGTGCGAAGGACTTGCATCACATTTTCACAAGTTGTTCGGAA TGTACCCTCAATACCGCTAACTTCCATAGCTTTCACAAGCATTCGAGTCAAACGGAATGGTACT TTTTCAGGGAACTTTTCTCGATTCATTGAAGCCTCAAAGCAATCTCCGAAGTCGATGTGTAATA TTTTTCCACTATAGCGATCTAACATAAGGTTGCTTGGATGCCGATCTCCTAAACCAAGCAAATA CCCAACCATGCTCATAACAGCCAGGCTTCTAGCGTAGTTTGTGCGGCGCTCAAGCCATACTTCC GAAGTTCGACTCTTCAGCCACAGAACCTTCGCAAGGTCATTTCCCTCAGTATTTTGCAAAGCAT GCTGAAACACTTCCACCTTTGCAATGAGGGGTAAGTGATCATAATCGGGTGCAAAAGCCAACAT AAGTCTGTGCTCCTGATTCAAGAAAATCTTCCTGGCATCTCTGTATTCACGGATCAGAGCATGA AGTGTGTCACAGTTTGGAACCCATCCAATTAAACCACTGTTAGGTGACAAAGGTATAACAGCAT ATCTTTGGATTGATAAATCCTTCTCTGATGTTTTCCTTGAGTTCTCTAGGAGAGTATTCACCAA ACCAAAAAGCTGCATTACTCGTTCATCTTGCCGCAAATCTTCGTGGCCTTTAAGCAAGAATGCA TAATCATTGCCATCACTTCCATGAATTGTCAGCTTTCTTGGCCTTTGTTTGGACGTTATAACAA TCAATTGGGGAACAAAATACTCAATCGTCACAAGTGGTGAAT
Genomic sequence	CCGACATAGTTTTGGCACAAATTTTCGTGTGAAGTCGCTTGGAGTATGAGCTTCTGAACCTGAA CCTTCACTGAGAGACCAGGTTGGGCATCCCGGGCATCTCCTGAAGCCAAATGCTCACTGCCATG TTGGATAGAGCTACCTGCTCCAGCCAAAGCTGACCCAGAAGAGAAGTCACGCCCTGTTAGTTTG TCACTCATCCGTGCCATCACAGCTACAGCACGCTCATTCAAAACCTCATTGGCATCACCGAGTT GATTGACAGCCTGCATGGACAAAATTAATGGTTACTCATCCAGGTGAGTGGTCGGGTTTAGTGC AATCAGACCACGAGGATGGAGAAGAGCAGGTAACCTGTAGCAGTTCCCTCTCACGTGCTCCTCG CTGAGGTTGCATGAGCTCTCGGTTAGCCACTGCTTCTTCACTACTGACAACCGTGTGAGCATGA ACATTACCATAGTTCGACACTTGAGGAACCTCATTGAAATTGAACAGACGCCAATTGATTAACG GGTCATGTACAAATGCCTGGGGAGAGCAAAAGCAAAATATTTAAAATGCTTAATAAGCACAAGA TCGCCAAGCATGTAGGTAGGTGGTACAAATAACACACACAACGAAGAACTGAAGACAAAAGGAT ATAGTCATCTTCCTATTGTGTTCTCCAAACAATCCCCCATTACAAAATCAGACCGTTGTAGAAA CATTGGGAGCATCAACTCAAAATATAGTACACAGATATGACAAATTAGTCTGCTATTTAATTTC TGCTAAATAAGGATACACATTTCTTTAGTGAGTGACATCTTGTTTTATCTAATCAAGCTCTTGA TTTCTGATTGAATCCAGCCTTAAGAAAACTAACTCCTAACCATTATTTATTTTTTTACTTTTCA GAATCTGTACTAGTAATAAAAATAACAGCGGCATCTGAAGTGAAGAAACTAAAGATTTCTCCAA GATATACGCTATGCAATAGGGTCATACGGAAAATAAGGTGATAATCTCACCTCCATCATGGCCA TAACGCTGTCTCTGTTTGTGCGAAGGACTTGCATCACATTTTCACAAGTTGTTCGGAATGTACC CTCAATACCGCTAACTTCCATAGCTTTCACAAGCATTCGAGTCAAACGGAATGGTACCTACACC GTACATTGCAAACTGGTAAGATACTGTCACAAACAAAAATGTAATGTCTAAGTCACAGTGAGGA GTACAAGTCATGAACACATTTCTAAATGTTAAACGTGCCTCCAAAAAGGCAAGTACATACTTTG ACCACTAATTTCTCTTATAGTCTATCAATATAAAGTCTCAAGCATGGACTACTGATTTCTCTAG TATATTGTCCACGATAATAAAATCTTAATCATAAGAAAACACTTTCGAATCAAATGGTGCAAAG TTTGTATCGTGCAATCTACACACTGGTATATTAATTTCTGGCCAAAGTTTATAAAGTTTGAAAG TTGAAACACCTACACCTTATAAAAAGAAAGTGAGGGAATAATTAAGGTATAATGCACACAGCAA GATTACTTACTTTTTCAGGGAACTTTTCTCGATTCATTGAAGCCTCAAAGCAATCTCCGAAGTC GATGTGTAATATTTTTCCACTGAAGAAAAAAGAACAATTTTATTACAGAAGTAACCGCATAATG CATACACTATACACTAATGGAAGAATAGTTCTGAAGATGTACCTATAGCGATCTAACATAAGGT TGCTTGGATGCCGATCTCCTAAACCAAGCAAATACCCAACCTGAAAATTACCTTTTCAGCATCT TAAAGTAATCAAGATTCCATTTGAAAATCAGAAGAAAGTAGCCCATACCATGCTCATAACAGCC AGGCTTCTAGCGTAGTTTGTGCGGCGCTCAAGCCATACTTCCGAAGTTCGACTCTTCAGCCACA GAACCTGCCACAGTTTATTTATATAGAATGAGGCTACAACATCGTAAATATAAAGGACATACTC ATTAAGAGAAGATACATAACAATACCTTCGCAAGGTCATTTCCCTCAGTATTTTGCAAAGCATG CTGAAACACTTCCACCTTTGCAATGAGGGGTAAGTGATCATAATCGGGTGCAAAAGCCAACATA AGTCTGTGCTCCTGATTCAAGAAAATCTGGACACGGAAACAAACACTAATTGCTAAATAAAATA AATCAAATATATATAGCTACGAGACAAGAGAATACAGCAAACAAACCTTCCTGGCATCTCTGTA TTCACGGATCAGAGCATGAAGTGTGTCACAGTTTGGAACCCATCCAATTAAACCACTGTTAGGT GACAAAGGTATAACAGCATATCTTTGGATTGATAAATCCTTCTCTGATGTTTTCCTTGAGTTCT CTAGGAGAGTATTCACCAAACCAAAAAGCTAAATGGAGAAGAAAGGAAATTAGATATTGTACAA GAACAAAATTACACAAAAAAAGTAAACAAGAGGTAATATTTTATGCTATTTTCACGATCAAGAA TAGCATTGAAACTAGTAAATTATTCTTATGTGATAATAACTGAATGCCCAAGAGACTCAAGTTC CCTTGCTGTGCTTTTCAGAATCACAGTTGGGATAAGACAGTGCTATTTATGCATAGATCATACA GCCACGGCAAACTGCCATTGCAATTTTTCACCTAGTTTCAGAATTAGTATCACATTGCTCATTT GATGTTTTTTTTAATGGAGACTTGAACAGAATTTGTCAAAGATATCCTTGGTCTCAACTAAAAA GCAAGATCAATACTGCTGACGCATAAGATAACTGCACTGCACAAATGTAAACCCTCAGCTCCAC TAAGATTTATTTTATTTTAGAACAAAAGGAGCTGGGGCGCTGGGCTATCACAATTTTGTGGGCG CACTACACAAAGATATGAGTGCTAATCAAGCCTACATTACTAACAAAAGAACCAATTAAATCAG TATAAAAAGGATATGCCATCAAAATACAAACCTGCATTACTCGTTCATCTTGCCGCAAATCTTC GTGGCCTTTAAGCAAGAATGCATAATCATTGCCATCACTTCCATGAATTGTCAGCTTTCTTGGC CTTTGTTTGGACGTTATAACAATCAATTGGGGAACAAAATACTCAATCGTCACAAGTGGTGAAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.184506703

Conservation Information
Conserved circRNAs	NA
PMCS	0.184506703

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							143302047-143305155(-)
143305021-143305155(-)
						
						Potential amino acid sequence
						
							MSDSPLVTIEYFVPQLIVITSKQRPRKLTIHGSDGNDYAFLLKGHEDLRQDERVMQLFGLVNTL
LENSRKTSEKDLSIQRYAVIPLSPNSGLIGWVPNCDTLHALIREYRDARKIFLNQEHRLMLAFA
PDYDHLPLIAKVEVFQHALQNTEGNDLAKVLWLKSRTSEVWLERRTNYARSLAVMSMVGYLLGL
GDRHPSNLMLDRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGTFRTTC
ENVMQVLRTNRDSVMAMMEAFVHDPLINWRLFNFNEVPQVSNYGNVHAHTVVSSEEAVANRELM
QPQRGARERELLQAVNQLGDANEVLNERAVAVMARMSDKLTGRDFSSGSALAGAGSSIQHGSEH
LASGDARDAQPGLSVKVQVQKLILQATSHENLCQNYVGFTTCDD*(-)
MQLFGLVNTLLENSRKTSEKDLSIQRYAVIPLSPNSGLIGWVPNCDTLHALIREYRDARKIFLN
QEHRLMLAFAPDYDHLPLIAKVEVFQHALQNTEGNDLAKVLWLKSRTSEVWLERRTNYARSLAV
MSMVGYLLGLGDRHPSNLMLDRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVS
GIEGTFRTTCENVMQVLRTNRDSVMAMMEAFVHDPLINWRLFNFNEVPQVSNYGNVHAHTVVSS
EEAVANRELMQPQRGARERELLQAVNQLGDANEVLNERAVAVMARMSDKLTGRDFSSGSALAGA
GSSIQHGSEHLASGDARDAQPGLSVKVQVQKLILQATSHENLCQNYVGFTTCDD*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	143302047-143305155(-) 143305021-143305155(-)
Potential amino acid sequence	MSDSPLVTIEYFVPQLIVITSKQRPRKLTIHGSDGNDYAFLLKGHEDLRQDERVMQLFGLVNTL LENSRKTSEKDLSIQRYAVIPLSPNSGLIGWVPNCDTLHALIREYRDARKIFLNQEHRLMLAFA PDYDHLPLIAKVEVFQHALQNTEGNDLAKVLWLKSRTSEVWLERRTNYARSLAVMSMVGYLLGL GDRHPSNLMLDRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVSGIEGTFRTTC ENVMQVLRTNRDSVMAMMEAFVHDPLINWRLFNFNEVPQVSNYGNVHAHTVVSSEEAVANRELM QPQRGARERELLQAVNQLGDANEVLNERAVAVMARMSDKLTGRDFSSGSALAGAGSSIQHGSEH LASGDARDAQPGLSVKVQVQKLILQATSHENLCQNYVGFTTCDD(-) MQLFGLVNTLLENSRKTSEKDLSIQRYAVIPLSPNSGLIGWVPNCDTLHALIREYRDARKIFLN QEHRLMLAFAPDYDHLPLIAKVEVFQHALQNTEGNDLAKVLWLKSRTSEVWLERRTNYARSLAV MSMVGYLLGLGDRHPSNLMLDRYSGKILHIDFGDCFEASMNREKFPEKVPFRLTRMLVKAMEVS GIEGTFRTTCENVMQVLRTNRDSVMAMMEAFVHDPLINWRLFNFNEVPQVSNYGNVHAHTVVSS EEAVANRELMQPQRGARERELLQAVNQLGDANEVLNERAVAVMARMSDKLTGRDFSSGSALAGA GSSIQHGSEHLASGDARDAQPGLSVKVQVQKLILQATSHENLCQNYVGFTTCDD(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d037950_circ_g.1

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