Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d011560_circ_g.1 |
ID in PlantcircBase | zma_circ_009738 |
Alias | zma_circ_0002860 |
Organism | Zea mays |
Position | chr8: 154467130-154472897 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d011560 |
Parent gene annotation |
Homeobox-DDT domain protein RLT1 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d011560_T041:7 Zm00001d011560_T023:7 Zm00001d011560_T017:7 Zm00001d011560_T029:8 Zm00001d011560_T053:7 Zm00001d011560_T006:7 Zm00001d011560_T055:7 Zm00001d011560_T056:7 Zm00001d011560_T009:7 Zm00001d011560_T049:7 Zm00001d011560_T008:7 Zm00001d011560_T027:7 Zm00001d011560_T059:2 Zm00001d011560_T036:7 Zm00001d011560_T007:7 Zm00001d011560_T039:7 Zm00001d011560_T028:7 Zm00001d011560_T033:7 Zm00001d011560_T031:7 Zm00001d011560_T010:7 Zm00001d011560_T043:7 Zm00001d011560_T012:7 Zm00001d011560_T020:6 Zm00001d011560_T045:7 Zm00001d011560_T032:7 Zm00001d011560_T026:7 Zm00001d011560_T014:8 Zm00001d011560_T016:7 Zm00001d011560_T021:7 Zm00001d011560_T048:7 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.105081123 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | zma-miR396a-5p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |