Plant Circular RNA Database

Detail information of Zm00001d029180_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d029180_circ_g.2
					
						ID in PlantcircBase
						zma_circ_006531
					
						Alias
						Zm01circ00066
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 61222969-61226733  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d029180						
					
						Parent gene annotation
						
							DNA helicase INO80
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d029180_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d029180_T009:6
Zm00001d029180_T023:6
Zm00001d029180_T024:6
Zm00001d029180_T018:7
Zm00001d029180_T025:4
Zm00001d029180_T001:6
Zm00001d029180_T012:6
Zm00001d029180_T021:6
Zm00001d029180_T003:6
Zm00001d029180_T016:6
Zm00001d029180_T002:6
Zm00001d029180_T013:6
Zm00001d029180_T005:6
Zm00001d029180_T007:6

General Information
CircRNA Name	Zm00001d029180_circ_g.2
ID in PlantcircBase	zma_circ_006531
Alias	Zm01circ00066
Organism	Zea mays
Position	chr1: 61222969-61226733 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d029180
Parent gene annotation	DNA helicase INO80
Parent gene strand	+
Alternative splicing	Zm00001d029180_circ_g.1
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d029180_T009:6 Zm00001d029180_T023:6 Zm00001d029180_T024:6 Zm00001d029180_T018:7 Zm00001d029180_T025:4 Zm00001d029180_T001:6 Zm00001d029180_T012:6 Zm00001d029180_T021:6 Zm00001d029180_T003:6 Zm00001d029180_T016:6 Zm00001d029180_T002:6 Zm00001d029180_T013:6 Zm00001d029180_T005:6 Zm00001d029180_T007:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GAGCATCAAGGTTGACAAAGAAGGAGATTTGACGCTTGAAGACTTGGATGATGCTACTGCTACT
GCAGAAGCTGTAGATCAAGATAAAACAAGCAAAAAGataaatgtttcatgtgctgatcgaaatt
ttgcctataagttcactgatgagatgtatgatccttgggtcatgaaactgttcctgggatttgc
tcgtactt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 951
Transcript exons: 61222969-61223226,61223638-61223745,61224223-61224317,61
224407-61224563,61225603-61225803,61226602-61226733
ATAAATGTTTCATGTGCTGATCGAAATTTTGCCTATAAGTTCACTGATGAGATGTATGATCCTT
GGGTCATGAAACTGTTCCTGGGATTTGCTCGTACTTCCGAGTTCAATGGTCCTAGACAACCAGT
TGCTCTTCATCCTTTGATACAAGAACTCAATACTGATTTGCCTATCCTTGAGCCGATGCTGCAG
CTACCCTATAGGATATTTGGGTCTTCTCCACCGATGAGTAATTTTGATCCAGCTAAAATGCTCA
CTGATTCTGGGAAGCTCCACACCTTGGATATGCTACTACGGCGCCTTCGAGCTGAAGGTCACCG
TGTGCTTCTTTTTGCTCAGATGACTAAAATGCTGGACATTCTTGAGGATTACATGAATTTTAGA
AAATTCAAGTATTTCAGACTTGATGGGTCTTCTGCAATCTCAGACCGCCGTGACATGGTCCGAG
CTTTCCAGAACAGGAATGATGTATTTGTTTTCTTGTTAAGCACAAGAGCTGGGGGGCTTGGTAT
TAATTTGACTGCTGCTGATACTGTTATTTTTTATGAAATTGACTGGAATCCAACACAAGACCAG
CAGGCAATGGATAGAACACACAGACTTGGTCAAACAAAGGAGGTAACTGTGTACAGGCTTATAT
GCAAAGATACTATCGAGGAGAAAATATTGCAAAGAGCAAAGCAGAAAAATGCAGTGCAAGAGTT
GGTTATGAAGGGGAAACATGTTCAGGACGATCATTTGTTGAGACAAGAGGATGTTGTTTCATTA
CTTATTGATGACACACAAATTGCACATAAGTTGAAAGAAATATCCATGCAGGCGAAGGATCGAC
AAAAGAAAAGACGAGCAAAGAGCATCAAGGTTGACAAAGAAGGAGATTTGACGCTTGAAGACTT
GGATGATGCTACTGCTACTGCAGAAGCTGTAGATCAAGATAAAACAAGCAAAAAG
						
					

						Genomic sequence
						
							ATAAATGTTTCATGTGCTGATCGAAATTTTGCCTATAAGTTCACTGATGAGATGTATGATCCTT
GGGTCATGAAACTGTTCCTGGGATTTGCTCGTACTTCCGAGTTCAATGGTCCTAGACAACCAGT
TGCTCTTCATCCTTTGATACAAGAACTCAATACTGATTTGCCTATCCTTGAGCCGATGCTGCAG
CTACCCTATAGGATATTTGGGTCTTCTCCACCGATGAGTAATTTTGATCCAGCTAAAATGCTCA
CTGTAAGTCTTCATCACTTCTGCTGTGTTATGTTGCACAATTGCACATTGTTGTTTATGCTTGT
TCTTTCATCTGCTGGCCTGCATAATTTTATTCCCCTTTTAGTCCTGTTTGCACATTTGGCTCAT
TTCCTTAGATTAGATTAAATTTGAAACAAATGTTGAAAATTTCTTGAAGGAGTCCCTCATCCAA
ATAGAGGTCTCTAAGTTATTATTTATATCAATGTGGATCTGTGGTGTCTTTTGAACTCTTGGAG
CTTATAAGCGCTCAAATATGTCTTTGGAAAGGATACAGCTTGATTATTAGAATGTTTGGAGTGA
ACTCCTTTACATAAAGGCCAAGCAATTTCTGTTTTTAATTGCACCTTTAGCTATTGTGGTACCG
TGTTACTAATATGGAGTGCTTGATGGCAGGATTCTGGGAAGCTCCACACCTTGGATATGCTACT
ACGGCGCCTTCGAGCTGAAGGTCACCGTGTGCTTCTTTTTGCTCAGATGACTAAAATGCTGGAC
ATTCTTGAGGTATTACTTTATGCTACATGTTTACTGTTTAATGTGTGCTATGCTACATGTTTGT
ACTTTCTATGCAGTATGCACACACATTTTGCAAAATCTACTACTAATGCTATAAGTGTACTAGT
GTAGTTATATACTTTTGTAGCCATAGATACCAAATGATGCATATCAATTTCGGTTCCACTATTT
GTAATGCTAACATTGTGGCTTCCGTGAAGGAACTGAAAACAGATTCCTAAATATTTCAGCAAAG
TTTAAAACTTTTGTGTTGGGGTTGGGTTGTGTGAGTTGTGTTGAGTGTGTGGATGTTGTGTGTT
TCTGTATTTTTTATCTTTTTTCCTTAATGCAATGATACATAGCTCTCCTCCATATTCAAGAAAA
AAAGAGTTGTCTGTCCATTATTCCTGGAAAATGTACTGTTAGAGTCTGGCGCACTAAAATTATT
ATTCTTTCAATTTATGACTGAATATGCTATATTTACAGGATTACATGAATTTTAGAAAATTCAA
GTATTTCAGACTTGATGGGTCTTCTGCAATCTCAGACCGCCGTGACATGGTCCGAGCTTTCCAG
AACAGGTTTGCATATCAATGTATTGGTGGCAGGGTTAAATGCTGTAATACGATGACATGTTTAA
ACATGGCCTTAACCACTTTTCTCTCTGTAGGAATGATGTATTTGTTTTCTTGTTAAGCACAAGA
GCTGGGGGGCTTGGTATTAATTTGACTGCTGCTGATACTGTTATTTTTTATGAAATTGACTGGA
ATCCAACACAAGACCAGCAGGCAATGGATAGAACACACAGACTTGGTCAAACAAAGGAGGTAAC
TGAAAACAGTTTATGCTGATTTTGTTTCTTCAGTTCACAGACCATCATTTATGATTTTTAAATG
ACATCTGAACATCATGACAAACTTACATCTAAAACACTGCGAAAGGGCCTCTAGCGTAATGGTT
AAGGCTTCTGAGTAGCACCTCCAGGTCTCGGGTTCGATCCCCTCGGGGGTGAATTTCTGGCTTG
GTTAAAAAAATCCCCTCACTGTGCTTTGCCCGCTCCCAGGTTACGTCATGTGCGCCACCCTCTG
GTTGGGCCATTGCAGAGTGGGCGGCGACTGCCCGCTAGTGATGGGGACCAGGGTTCGGGGATTT
TCTCGGCCGGGACCATGTTTCGGTCTCTTCTTAATATAATACCGGGAAGACAACATTTCCCTCC
CCGGCTGATATTTTTTTTACTTCGAAAACATGGACACTTGAAGTTTGATTAACTTCTGTATGAT
AATCTTTATAGTTAACTTGTTTCACATTTCGAAAGTTAGATTGATTATTAATGAAAGCTAACGA
GGTGTTTAATTTTCATATCCACTTTTAGTCATCATTTCTTTCATTCAGTTTATTTTGAAAGTGT
CCACCACCCCTTTTCTTTCCTTTTTTTCTCCTTGTAGATTGTTGTTCTACAATAAAGTCAGACT
TAATTGCCAACCCTGTTAACTCTTCTGACAGCATTCCTTGTTGCTACTAGTCACAAATTTTTTC
TTGGATATCGACACAATCTCCGAACATATTTTTTAACTGCTAATTCCTGTTGTTGTATGTTTAT
AGAACCTAATAGTAAAGTAGTAAAGGTACTTTCTGAGACAAATCTAAACATTTTTTTGAGTTTT
TAATGTATATCCTTAATGGAGCATTGATTAAATTTCTAAAGTTTGACTGCTTATGTCGAAAGCA
AGTTGTATTTTTTACCATTGGTTGTGAATTGGCTTCTTGGCTGTTACTGGAATTAAATATCTTT
GTTGTTTGATTATGTGTGAATAAGTTTTATAATAGGGCAGGTCCTTATATTTTCTTTGAAACCT
GCTATTTTAGGTAACTGTGTACAGGCTTATATGCAAAGATACTATCGAGGAGAAAATATTGCAA
AGAGCAAAGCAGAAAAATGCAGTGCAAGAGTTGGTTATGAAGGGGAAACATGTTCAGGACGATC
ATTTGTTGAGACAAGAGGATGTTGTTTCATTACTTATTGATGACACACAAATTGCACATAAGTT
GAAAGAAATATCCATGCAGGTAAACATCACATTATAGTGTCATTTCCATCTTTTTGTCACTTAT
ATGATTATCTGGTACTCATACAATCGGAACACATATCCAACAAAAATATATTTTGCAATGTCAG
TATTAGCTTGTAGCAATTGCTATGATATGTCACATAGTTGTAAATGGAATGGAACTGCTGCATA
GGTGATATATATTTGCAAGTATTTGAACGATTTTATTTTTTTGGAGACATCATCTCTGATATCA
CAATACTTACTGATACCTGCACGGTATACCAATACATTTCTCAAATTGCATATTTGCAGCCTTA
GAGGATTGCCCATGCAGAGAGGATTGGACTTACAATGGCAACTGGGAGTCTCTGGATCCCTCTA
AAATAGGGGAAGATGAACATGTGTTAAATTCGTAGGTGGAAGAGTCAAACATGAAGGGACAACA
TAGTTTAGCTTTTACTGGTGGTGGGGGAGAGGGACATATAATAATCGTATTTGGGTTCTTTGGT
TTTGGGTTATTACGTCGTTATGATTGTACTTTATTGTGCTCTATATTGTTCTACTGTCCAGAAA
TTTACTGTTCTTGCTGGTAGGCTGGGCCACGGGTGTCTCTATATATGGTTAAATAAATTTACCT
GTCTGTTAGACTAATTTAAGAAAATATTGGTCTACCCCTTTTAACAGTGGCCTGTAGTACCAAT
CTTGTATTAGTTTATAATATTTCCCCTTTGTTTCTGGAAACAATATTATATTTAAATCCAATGG
GAAAAAGTCTTGCATGAACTTCATTTTTCATCTTCATTTGCCATTTTAGGCGAAGGATCGACAA
AAGAAAAGACGAGCAAAGAGCATCAAGGTTGACAAAGAAGGAGATTTGACGCTTGAAGACTTGG
ATGATGCTACTGCTACTGCAGAAGCTGTAGATCAAGATAAAACAAGCAAAAAG
						
					

			
		

Sequences
Splice junction sequence	GAGCATCAAGGTTGACAAAGAAGGAGATTTGACGCTTGAAGACTTGGATGATGCTACTGCTACT GCAGAAGCTGTAGATCAAGATAAAACAAGCAAAAAGataaatgtttcatgtgctgatcgaaatt ttgcctataagttcactgatgagatgtatgatccttgggtcatgaaactgttcctgggatttgc tcgtactt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 951 Transcript exons: 61222969-61223226,61223638-61223745,61224223-61224317,61 224407-61224563,61225603-61225803,61226602-61226733 ATAAATGTTTCATGTGCTGATCGAAATTTTGCCTATAAGTTCACTGATGAGATGTATGATCCTT GGGTCATGAAACTGTTCCTGGGATTTGCTCGTACTTCCGAGTTCAATGGTCCTAGACAACCAGT TGCTCTTCATCCTTTGATACAAGAACTCAATACTGATTTGCCTATCCTTGAGCCGATGCTGCAG CTACCCTATAGGATATTTGGGTCTTCTCCACCGATGAGTAATTTTGATCCAGCTAAAATGCTCA CTGATTCTGGGAAGCTCCACACCTTGGATATGCTACTACGGCGCCTTCGAGCTGAAGGTCACCG TGTGCTTCTTTTTGCTCAGATGACTAAAATGCTGGACATTCTTGAGGATTACATGAATTTTAGA AAATTCAAGTATTTCAGACTTGATGGGTCTTCTGCAATCTCAGACCGCCGTGACATGGTCCGAG CTTTCCAGAACAGGAATGATGTATTTGTTTTCTTGTTAAGCACAAGAGCTGGGGGGCTTGGTAT TAATTTGACTGCTGCTGATACTGTTATTTTTTATGAAATTGACTGGAATCCAACACAAGACCAG CAGGCAATGGATAGAACACACAGACTTGGTCAAACAAAGGAGGTAACTGTGTACAGGCTTATAT GCAAAGATACTATCGAGGAGAAAATATTGCAAAGAGCAAAGCAGAAAAATGCAGTGCAAGAGTT GGTTATGAAGGGGAAACATGTTCAGGACGATCATTTGTTGAGACAAGAGGATGTTGTTTCATTA CTTATTGATGACACACAAATTGCACATAAGTTGAAAGAAATATCCATGCAGGCGAAGGATCGAC AAAAGAAAAGACGAGCAAAGAGCATCAAGGTTGACAAAGAAGGAGATTTGACGCTTGAAGACTT GGATGATGCTACTGCTACTGCAGAAGCTGTAGATCAAGATAAAACAAGCAAAAAG
Genomic sequence	ATAAATGTTTCATGTGCTGATCGAAATTTTGCCTATAAGTTCACTGATGAGATGTATGATCCTT GGGTCATGAAACTGTTCCTGGGATTTGCTCGTACTTCCGAGTTCAATGGTCCTAGACAACCAGT TGCTCTTCATCCTTTGATACAAGAACTCAATACTGATTTGCCTATCCTTGAGCCGATGCTGCAG CTACCCTATAGGATATTTGGGTCTTCTCCACCGATGAGTAATTTTGATCCAGCTAAAATGCTCA CTGTAAGTCTTCATCACTTCTGCTGTGTTATGTTGCACAATTGCACATTGTTGTTTATGCTTGT TCTTTCATCTGCTGGCCTGCATAATTTTATTCCCCTTTTAGTCCTGTTTGCACATTTGGCTCAT TTCCTTAGATTAGATTAAATTTGAAACAAATGTTGAAAATTTCTTGAAGGAGTCCCTCATCCAA ATAGAGGTCTCTAAGTTATTATTTATATCAATGTGGATCTGTGGTGTCTTTTGAACTCTTGGAG CTTATAAGCGCTCAAATATGTCTTTGGAAAGGATACAGCTTGATTATTAGAATGTTTGGAGTGA ACTCCTTTACATAAAGGCCAAGCAATTTCTGTTTTTAATTGCACCTTTAGCTATTGTGGTACCG TGTTACTAATATGGAGTGCTTGATGGCAGGATTCTGGGAAGCTCCACACCTTGGATATGCTACT ACGGCGCCTTCGAGCTGAAGGTCACCGTGTGCTTCTTTTTGCTCAGATGACTAAAATGCTGGAC ATTCTTGAGGTATTACTTTATGCTACATGTTTACTGTTTAATGTGTGCTATGCTACATGTTTGT ACTTTCTATGCAGTATGCACACACATTTTGCAAAATCTACTACTAATGCTATAAGTGTACTAGT GTAGTTATATACTTTTGTAGCCATAGATACCAAATGATGCATATCAATTTCGGTTCCACTATTT GTAATGCTAACATTGTGGCTTCCGTGAAGGAACTGAAAACAGATTCCTAAATATTTCAGCAAAG TTTAAAACTTTTGTGTTGGGGTTGGGTTGTGTGAGTTGTGTTGAGTGTGTGGATGTTGTGTGTT TCTGTATTTTTTATCTTTTTTCCTTAATGCAATGATACATAGCTCTCCTCCATATTCAAGAAAA AAAGAGTTGTCTGTCCATTATTCCTGGAAAATGTACTGTTAGAGTCTGGCGCACTAAAATTATT ATTCTTTCAATTTATGACTGAATATGCTATATTTACAGGATTACATGAATTTTAGAAAATTCAA GTATTTCAGACTTGATGGGTCTTCTGCAATCTCAGACCGCCGTGACATGGTCCGAGCTTTCCAG AACAGGTTTGCATATCAATGTATTGGTGGCAGGGTTAAATGCTGTAATACGATGACATGTTTAA ACATGGCCTTAACCACTTTTCTCTCTGTAGGAATGATGTATTTGTTTTCTTGTTAAGCACAAGA GCTGGGGGGCTTGGTATTAATTTGACTGCTGCTGATACTGTTATTTTTTATGAAATTGACTGGA ATCCAACACAAGACCAGCAGGCAATGGATAGAACACACAGACTTGGTCAAACAAAGGAGGTAAC TGAAAACAGTTTATGCTGATTTTGTTTCTTCAGTTCACAGACCATCATTTATGATTTTTAAATG ACATCTGAACATCATGACAAACTTACATCTAAAACACTGCGAAAGGGCCTCTAGCGTAATGGTT AAGGCTTCTGAGTAGCACCTCCAGGTCTCGGGTTCGATCCCCTCGGGGGTGAATTTCTGGCTTG GTTAAAAAAATCCCCTCACTGTGCTTTGCCCGCTCCCAGGTTACGTCATGTGCGCCACCCTCTG GTTGGGCCATTGCAGAGTGGGCGGCGACTGCCCGCTAGTGATGGGGACCAGGGTTCGGGGATTT TCTCGGCCGGGACCATGTTTCGGTCTCTTCTTAATATAATACCGGGAAGACAACATTTCCCTCC CCGGCTGATATTTTTTTTACTTCGAAAACATGGACACTTGAAGTTTGATTAACTTCTGTATGAT AATCTTTATAGTTAACTTGTTTCACATTTCGAAAGTTAGATTGATTATTAATGAAAGCTAACGA GGTGTTTAATTTTCATATCCACTTTTAGTCATCATTTCTTTCATTCAGTTTATTTTGAAAGTGT CCACCACCCCTTTTCTTTCCTTTTTTTCTCCTTGTAGATTGTTGTTCTACAATAAAGTCAGACT TAATTGCCAACCCTGTTAACTCTTCTGACAGCATTCCTTGTTGCTACTAGTCACAAATTTTTTC TTGGATATCGACACAATCTCCGAACATATTTTTTAACTGCTAATTCCTGTTGTTGTATGTTTAT AGAACCTAATAGTAAAGTAGTAAAGGTACTTTCTGAGACAAATCTAAACATTTTTTTGAGTTTT TAATGTATATCCTTAATGGAGCATTGATTAAATTTCTAAAGTTTGACTGCTTATGTCGAAAGCA AGTTGTATTTTTTACCATTGGTTGTGAATTGGCTTCTTGGCTGTTACTGGAATTAAATATCTTT GTTGTTTGATTATGTGTGAATAAGTTTTATAATAGGGCAGGTCCTTATATTTTCTTTGAAACCT GCTATTTTAGGTAACTGTGTACAGGCTTATATGCAAAGATACTATCGAGGAGAAAATATTGCAA AGAGCAAAGCAGAAAAATGCAGTGCAAGAGTTGGTTATGAAGGGGAAACATGTTCAGGACGATC ATTTGTTGAGACAAGAGGATGTTGTTTCATTACTTATTGATGACACACAAATTGCACATAAGTT GAAAGAAATATCCATGCAGGTAAACATCACATTATAGTGTCATTTCCATCTTTTTGTCACTTAT ATGATTATCTGGTACTCATACAATCGGAACACATATCCAACAAAAATATATTTTGCAATGTCAG TATTAGCTTGTAGCAATTGCTATGATATGTCACATAGTTGTAAATGGAATGGAACTGCTGCATA GGTGATATATATTTGCAAGTATTTGAACGATTTTATTTTTTTGGAGACATCATCTCTGATATCA CAATACTTACTGATACCTGCACGGTATACCAATACATTTCTCAAATTGCATATTTGCAGCCTTA GAGGATTGCCCATGCAGAGAGGATTGGACTTACAATGGCAACTGGGAGTCTCTGGATCCCTCTA AAATAGGGGAAGATGAACATGTGTTAAATTCGTAGGTGGAAGAGTCAAACATGAAGGGACAACA TAGTTTAGCTTTTACTGGTGGTGGGGGAGAGGGACATATAATAATCGTATTTGGGTTCTTTGGT TTTGGGTTATTACGTCGTTATGATTGTACTTTATTGTGCTCTATATTGTTCTACTGTCCAGAAA TTTACTGTTCTTGCTGGTAGGCTGGGCCACGGGTGTCTCTATATATGGTTAAATAAATTTACCT GTCTGTTAGACTAATTTAAGAAAATATTGGTCTACCCCTTTTAACAGTGGCCTGTAGTACCAAT CTTGTATTAGTTTATAATATTTCCCCTTTGTTTCTGGAAACAATATTATATTTAAATCCAATGG GAAAAAGTCTTGCATGAACTTCATTTTTCATCTTCATTTGCCATTTTAGGCGAAGGATCGACAA AAGAAAAGACGAGCAAAGAGCATCAAGGTTGACAAAGAAGGAGATTTGACGCTTGAAGACTTGG ATGATGCTACTGCTACTGCAGAAGCTGTAGATCAAGATAAAACAAGCAAAAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.094984123

Conservation Information
Conserved circRNAs	NA
PMCS	0.094984123

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							61223021-61226730(+)
						
						Potential amino acid sequence
						
							MYDPWVMKLFLGFARTSEFNGPRQPVALHPLIQELNTDLPILEPMLQLPYRIFGSSPPMSNFDP
AKMLTDSGKLHTLDMLLRRLRAEGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRR
DMVRAFQNRNDVFVFLLSTRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTV
YRLICKDTIEEKILQRAKQKNAVQELVMKGKHVQDDHLLRQEDVVSLLIDDTQIAHKLKEISMQ
AKDRQKKRRAKSIKVDKEGDLTLEDLDDATATAEAVDQDKTSKKINVSCADRNFAYKFTDEMYD
PWVMKLFLGFARTSEFNGPRQPVALHPLIQELNTDLPILEPMLQLPYRIFGSSPPMSNFDPAKM
LTDSGKLHTLDMLLRRLRAEGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMV
RAFQNRNDVFVFLLSTRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRL
ICKDTIEEKILQRAKQKNAVQELVMKGKHVQDDHLLRQEDVVSLLIDDTQIAHKLKEISMQAKD
RQKKRRAKSIKVDKEGDLTLEDLDDATATAEAVDQDKTSKKINVSCADRNFAYKFTDEMYDPWV
MKLFLGFARTSEFNGPRQPVALHPLIQELNTDLPILEPMLQLPYRIFGSSPPMSNFDPAKMLTD
SGKLHTLDMLLRRLRAEGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRAF
QNRNDVFVFLLSTRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICK
DTIEEKILQRAKQKNAVQELVMKGKHVQDDHLLRQEDVVSLLIDDTQIAHKLKEISMQAKDRQK
KRRAKSIKVDKEGDLTLEDLDDATATAEAVDQDKTSKKINVSCADRNFAYKFTDEMYDPWVMKL
FLGFARTSEFNGPRQPVALHPLIQELNTDLPILEPMLQLPYRIFGSSPPMSNFDPAKMLTDSGK
LHTLDMLLRRLRAEGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRAFQNR
NDVFVFLLSTRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTI
EEKILQRAKQKNAVQELVMKGKHVQDDHLLRQEDVVSLLIDDTQIAHKLKEISMQAKDRQKKRR
AKSIKVDKEGDLTLEDLDDATATAEAVDQDKTSKK(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	61223021-61226730(+)
Potential amino acid sequence	MYDPWVMKLFLGFARTSEFNGPRQPVALHPLIQELNTDLPILEPMLQLPYRIFGSSPPMSNFDP AKMLTDSGKLHTLDMLLRRLRAEGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRR DMVRAFQNRNDVFVFLLSTRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTV YRLICKDTIEEKILQRAKQKNAVQELVMKGKHVQDDHLLRQEDVVSLLIDDTQIAHKLKEISMQ AKDRQKKRRAKSIKVDKEGDLTLEDLDDATATAEAVDQDKTSKKINVSCADRNFAYKFTDEMYD PWVMKLFLGFARTSEFNGPRQPVALHPLIQELNTDLPILEPMLQLPYRIFGSSPPMSNFDPAKM LTDSGKLHTLDMLLRRLRAEGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMV RAFQNRNDVFVFLLSTRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRL ICKDTIEEKILQRAKQKNAVQELVMKGKHVQDDHLLRQEDVVSLLIDDTQIAHKLKEISMQAKD RQKKRRAKSIKVDKEGDLTLEDLDDATATAEAVDQDKTSKKINVSCADRNFAYKFTDEMYDPWV MKLFLGFARTSEFNGPRQPVALHPLIQELNTDLPILEPMLQLPYRIFGSSPPMSNFDPAKMLTD SGKLHTLDMLLRRLRAEGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRAF QNRNDVFVFLLSTRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICK DTIEEKILQRAKQKNAVQELVMKGKHVQDDHLLRQEDVVSLLIDDTQIAHKLKEISMQAKDRQK KRRAKSIKVDKEGDLTLEDLDDATATAEAVDQDKTSKKINVSCADRNFAYKFTDEMYDPWVMKL FLGFARTSEFNGPRQPVALHPLIQELNTDLPILEPMLQLPYRIFGSSPPMSNFDPAKMLTDSGK LHTLDMLLRRLRAEGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRAFQNR NDVFVFLLSTRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTI EEKILQRAKQKNAVQELVMKGKHVQDDHLLRQEDVVSLLIDDTQIAHKLKEISMQAKDRQKKRR AKSIKVDKEGDLTLEDLDDATATAEAVDQDKTSKK(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d029180_circ_g.2

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