Plant Circular RNA Database

Detail information of Os08g0128300_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os08g0128300_circ_g.1
					
						ID in PlantcircBase
						osa_circ_035724
					
						Alias
						Os_ciR11394
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 1610315-1613746  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Os08g0128300						
					
						Parent gene annotation
						
							Similar to Actin-like protein 3 (Actin-related protein 3). (Os08
t0128300-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os08g0128300_circ_g.2 Os08g0128300_circ_g.3 Os08g0128300_circ_g.4 						
					
						Support reads
						2
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0128300-01:8

General Information
CircRNA Name	Os08g0128300_circ_g.1
ID in PlantcircBase	osa_circ_035724
Alias	Os_ciR11394
Organism	Oryza sativa
Position	chr8: 1610315-1613746 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	find_circ
Parent gene	Os08g0128300
Parent gene annotation	Similar to Actin-like protein 3 (Actin-related protein 3). (Os08 t0128300-01)
Parent gene strand	-
Alternative splicing	Os08g0128300_circ_g.2 Os08g0128300_circ_g.3 Os08g0128300_circ_g.4
Support reads	2
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0128300-01:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCACATCTCTGACTGGTCCAGAAAAGACTCATTCACAGCTACTACAGTAGGGATGGTGAAACAT
GGCTCAGAGTTACCAGAGAATCCAAGTTTGCTATACctcataaaattcagggttagaagcagct
actgaacccccgaaccaagctgcataactctgtataggatgggcgaccacattgacttcaacag
gctggaac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1167
Transcript exons: 1610315-1610407,1610548-1610673,1610748-1610858,1611334-
1611453,1612010-1612102,1612369-1612502,1613166-1613420,
1613512-1613746
CTCATAAAATTCAGGGTTAGAAGCAGCTACTGAACCCCCGAACCAAGCTGCATAACTCTGTATA
GGATGGGCGACCACATTGACTTCAACAGGTTTCACCTCCACATGGTGACGGGCATTAGTTGCGG
CAACACGCTCATCTACTATCTTCTTTATGTCATTCTGAAGTCTCTTGTGGAAGTCCTTAAACAT
TGTAGATCCACCAGACAATACTATATTCTTATACAGATCTCTCCTTGTGTCAATTGGCGCAGAT
TGAACACAGCTATCAATTAGTTCAGGTAGAGGAGTGGAGAAGTCGGCAGAGTAAATCTCGGGAT
GGAAGAAGATCTCTGGTCCAAGAAAACGCTCATATCCAATATCAATTGTGTATGGGACTCCAGT
CTTGGGCTTAATAGCAGACCAGTGTTTGATATACTTATCAGGCTTTTTGTCATGCTTCTTGAAC
TCCTTGACAATGTCTGAAGAAGTGTAGCAATACATTTCTTTCACCCTACGAGCTATATCCAAAG
AATCCTCAGGTGCAATAAGTTCACCTCTTTCCTGTAAAAGCTGCAAAACAAACTGTGTAACGTC
ACTTCCTGAAAATGGAAAAGACTTGATGCTACTCCCAATTACGTAGCCGTTTACAACCGGCACC
ACATGTGGAGCTCCATCCCCAATATCAACTACTACACCACAGAAACCGAGTCCTCATCAGAAAT
ACTTTTCAGAAAGGCATATCCAGCAGAAAGACTGAGGACAGATTGAACAGAAATATATAGTCCA
GGAACATTGAAAGTCTCAAACATAATTTCCCCTGCACATTCACGACTTTCAGGTGTACTGACAG
GACTATCGGTAAGAAGGAAGTAGTGCTCTTCAGGATTGCACCGTAGATAGTTGAAAATGCACTG
TTGCCAAAATCTTTCCATTGTATCCCAGTCATCAACCTGACCATGATTAATTGGGTGTTTTCTA
GTGTACAGCCCACTAGATTTAAATAGTGATAGAGCCTCATCACCAATAAAAAAATCCAGGTCAG
CCATGACACCTGCATTGTACTGTGCTATCCAATTTGCACTACTGCACATCTCTGACTGGTCCAG
AAAAGACTCATTCACAGCTACTACAGTAGGGATGGTGAAACATGGCTCAGAGTTACCAGAGAAT
CCAAGTTTGCTATAC
						
					

						Genomic sequence
						
							CTCATAAAATTCAGGGTTAGAAGCAGCTACTGAACCCCCGAACCAAGCTGCATAACTCTGTATA
GGATGGGCGACCACATTGACTTCAACAGGCTGGAACCAAAACATTAGACGAACGAAACACTCAA
TTAATTGTCAACAAAGACTCCTGAGACAACAGGTTGAGACAAAACACAAATGGAATAGTTCAAG
TATTGCCGTATGAACTCAAAACCAATCATCGTTGTACTTACTTTCACCTCCACATGGTGACGGG
CATTAGTTGCGGCAACACGCTCATCTACTATCTTCTTTATGTCATTCTGAAGTCTCTTGTGGAA
GTCCTTAAACATTGTAGATCCACCAGACAATACTATATTCTGCAAATAGTCAAATATCACATAA
TCAATATATGTCACATTCTTAGATGTGTCCCAGAGTTCAAACAAAGCACCTTATACAGATCTCT
CCTTGTGTCAATTGGCGCAGATTGAACACAGCTATCAATTAGTTCAGGTAGAGGAGTGGAGAAG
TCGGCAGAGTAAATCTCGGGATGGAAGAAGATCTGCATTTGCGCTAGTAGAAGGTTAGTAAATT
ACATCAAATTCATGTTTTTCTCCTTTTAATGTCATTTCAAGGTGAAGAGTCCAAATGTCAATAA
AATGACTTCTGGAGGAAGCATTTATCAGATCAACACAAAATTTACATTTGACCCATAGTTCTTA
TTAGTCCTTTTTGTGTTGAAGCCCCTGGACTTTCACTAATACTGAATGCCCTAGAGAACAGAAT
TACTCTTCCAACTAATCATACATGTTCAATCATAACATGGGCTTTCAGTTCATTCCAACAATGC
ACATGATTTCATGGAGTAGCACATTAGACAAACAAACAGGACACAATCAATTATAACATCAAAA
GCTGTAAAAATGTTATCACGTCAGTAGGGTAGCACGCCTGTTCAAAGCATGATTGGTATCATGT
CAATTGTAGCAACACTACTAAAAGAACATGGAAACTAGATGATAGAAATGGGAACAAACCTCTG
GTCCAAGAAAACGCTCATATCCAATATCAATTGTGTATGGGACTCCAGTCTTGGGCTTAATAGC
AGACCAGTGTTTGATATACTTATCAGGCTTTTTGTCATGCTTCTTGAACTCCTGAAATTGTAAC
GGAAACACATAATAACCTATCTGTTCAAGATAAGTCTAAACTACAGTTCAATCTTGCTGGTAGA
ACCAGAATAATAATATCATATGTAGTATATATTAGCCAGCAGATAAATCCATGACAAAAGTAAC
ATCACAAAAAATTTAATCTCTGCCATCCGAATCATGCTGCAACTTGCCCATGGGCTATTCTCCA
GGCATTAACTAATCCGTGATAATCATAACAAAACAAATTACAATTCACAACAAAGTTGGCATTT
TTTTTGTTTCTTCAAACATAATTGTTTCGCATTTAAAATTCAAAGGATGATACAGCACGCCATT
ATCTCCTGCGTATTCTGAAAAAAAAATACAGCACACCATTCCTTTCATGGAATTTGTTGTGTTG
ACTCGATAGTCGATATACAGATACTTCAACAGAAACATCACTTTCAACTATTTCATCAAAGAAT
GTATTTATGTACACCGTTGGAAAATTACAACAAGGTACCCTAAAAAACATAAGGTATTATTGAG
TAAGTAGCTCCGAAACCAAGCAGCATAATACCTTGACAATGTCTGAAGAAGTGTAGCAATACAT
TTCTTTCACCCTACGAGCTATATCCAAAGAATCCTCAGGTGCAATAAGTTCACCTCTTTCCTGC
ACAACAAAAGATGCCATTAATCACTAAAAACATTATGTGACAGGCCACAACTAATTATAGAGGC
AATAAAGATCTGGGAGCAGCATAACTCAAATTACAGATGAAAACTGAGTAGAACATTGAGAATA
GTATCAATTGTTCTAATTTAGTACTGTAAAAACTACTCGATGCTCCTTTCAATGTATTTGCACT
ATATGAATGCTAGATACACACACACATCCTGTTTATGAACAACATGACTTATGAGGAGAAGATG
AAATACCTGTAAAAGCTGCAAAACAAACTGTGTAACGTCACTTCCTGAAAATGGAAAAGACTTG
ATGCTACTCCCAATTACGTAGCCGTTTACAACCGGCACCACATGTGGAGCTCCATCCCCAATAT
CAACTACTACACCTGTCATATCAGACTGACAAAATATACTGGTCAAACTTAACAATAATAAGTA
GCATGGTGTACCAGAAATTTTAAGGGCATGTAATTAAAAGGGAGCATGAATAGACCCAACAGAT
ATGAATTATGGGTGTTCAAACTTTTGCAAGGTTGGTACTGGCTTGCTAGGAACTACAGATCTTT
ATCCTCAACCAAACTGGCAACTAAAAGACTAAATTTACACAGTCATATTGTATTAATGTTGATT
TCTCATAGTGCTTCAATCAGTATTATCTGTCTTTCATATTGCTTAAATATATACTTCTCTTCGC
ATATAACACAATATGCAGAACATGTTTATTTGCATACCAGTATACAAGGGAATAGCAAAACAAA
ACTGCATACAAGAATAGGAATTCTAGGAACAACACAGGCAACAAATATCTATGGATAATATGGC
AGGAACAGACTGGATTTTTTTTTTTGAAATGTGGCTATTTAAATATCTTAAAGAAAGGGAGCAA
AAACAGAGTTTGTCATAGCAGGGCTACATGTCATTAAAACAAGTTTACAATAATTTTGTAATAC
AGAAAATTCTTTTCAGTCAAGGAGATGCAGTCCATGTGGAAACAAATGTCTCACTGGAGCAAAT
AAAAAGCATGAAAAGCAGATGTTTACAGAACCTACCACAGAAACCGAGTCCTCATCAGAAATAC
TTTTCAGAAAGGCATATCCAGCAGAAAGACTGAGGACAGATTGAACAGAAATATATAGTCCAGG
AACATTGAAAGTCTCAAACATAATTTCCCCTGCACATTCACGACTTTCAGGTGTACTGACAGGA
CTATCGGTAAGAAGGAAGTAGTGCTCTTCAGGATTGCACCGTAGATAGTTGAAAATGCACTGTT
GCCAAAATCTTTCCATTGTATCCCAGTCATCAACCTGCAAAAGGGTAAAAGGGACATACTATAG
TCGTATAACATAGAAATATAAACAATTGTTGTTATTACAAACAGAAAACACATAAACATACCTG
ACCATGATTAATTGGGTGTTTTCTAGTGTACAGCCCACTAGATTTAAATAGTGATAGAGCCTCA
TCACCAATAAAAAAATCCAGGTCAGCCATGACACCTGCATTGTACTGTGCTATCCAATTTGCAC
TACTGCACATCTCTGACTGGTCCAGAAAAGACTCATTCACAGCTACTACAGTAGGGATGGTGAA
ACATGGCTCAGAGTTACCAGAGAATCCAAGTTTGCTATAC
						
					

			
		

Sequences
Splice junction sequence	GCACATCTCTGACTGGTCCAGAAAAGACTCATTCACAGCTACTACAGTAGGGATGGTGAAACAT GGCTCAGAGTTACCAGAGAATCCAAGTTTGCTATACctcataaaattcagggttagaagcagct actgaacccccgaaccaagctgcataactctgtataggatgggcgaccacattgacttcaacag gctggaac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1167 Transcript exons: 1610315-1610407,1610548-1610673,1610748-1610858,1611334- 1611453,1612010-1612102,1612369-1612502,1613166-1613420, 1613512-1613746 CTCATAAAATTCAGGGTTAGAAGCAGCTACTGAACCCCCGAACCAAGCTGCATAACTCTGTATA GGATGGGCGACCACATTGACTTCAACAGGTTTCACCTCCACATGGTGACGGGCATTAGTTGCGG CAACACGCTCATCTACTATCTTCTTTATGTCATTCTGAAGTCTCTTGTGGAAGTCCTTAAACAT TGTAGATCCACCAGACAATACTATATTCTTATACAGATCTCTCCTTGTGTCAATTGGCGCAGAT TGAACACAGCTATCAATTAGTTCAGGTAGAGGAGTGGAGAAGTCGGCAGAGTAAATCTCGGGAT GGAAGAAGATCTCTGGTCCAAGAAAACGCTCATATCCAATATCAATTGTGTATGGGACTCCAGT CTTGGGCTTAATAGCAGACCAGTGTTTGATATACTTATCAGGCTTTTTGTCATGCTTCTTGAAC TCCTTGACAATGTCTGAAGAAGTGTAGCAATACATTTCTTTCACCCTACGAGCTATATCCAAAG AATCCTCAGGTGCAATAAGTTCACCTCTTTCCTGTAAAAGCTGCAAAACAAACTGTGTAACGTC ACTTCCTGAAAATGGAAAAGACTTGATGCTACTCCCAATTACGTAGCCGTTTACAACCGGCACC ACATGTGGAGCTCCATCCCCAATATCAACTACTACACCACAGAAACCGAGTCCTCATCAGAAAT ACTTTTCAGAAAGGCATATCCAGCAGAAAGACTGAGGACAGATTGAACAGAAATATATAGTCCA GGAACATTGAAAGTCTCAAACATAATTTCCCCTGCACATTCACGACTTTCAGGTGTACTGACAG GACTATCGGTAAGAAGGAAGTAGTGCTCTTCAGGATTGCACCGTAGATAGTTGAAAATGCACTG TTGCCAAAATCTTTCCATTGTATCCCAGTCATCAACCTGACCATGATTAATTGGGTGTTTTCTA GTGTACAGCCCACTAGATTTAAATAGTGATAGAGCCTCATCACCAATAAAAAAATCCAGGTCAG CCATGACACCTGCATTGTACTGTGCTATCCAATTTGCACTACTGCACATCTCTGACTGGTCCAG AAAAGACTCATTCACAGCTACTACAGTAGGGATGGTGAAACATGGCTCAGAGTTACCAGAGAAT CCAAGTTTGCTATAC
Genomic sequence	CTCATAAAATTCAGGGTTAGAAGCAGCTACTGAACCCCCGAACCAAGCTGCATAACTCTGTATA GGATGGGCGACCACATTGACTTCAACAGGCTGGAACCAAAACATTAGACGAACGAAACACTCAA TTAATTGTCAACAAAGACTCCTGAGACAACAGGTTGAGACAAAACACAAATGGAATAGTTCAAG TATTGCCGTATGAACTCAAAACCAATCATCGTTGTACTTACTTTCACCTCCACATGGTGACGGG CATTAGTTGCGGCAACACGCTCATCTACTATCTTCTTTATGTCATTCTGAAGTCTCTTGTGGAA GTCCTTAAACATTGTAGATCCACCAGACAATACTATATTCTGCAAATAGTCAAATATCACATAA TCAATATATGTCACATTCTTAGATGTGTCCCAGAGTTCAAACAAAGCACCTTATACAGATCTCT CCTTGTGTCAATTGGCGCAGATTGAACACAGCTATCAATTAGTTCAGGTAGAGGAGTGGAGAAG TCGGCAGAGTAAATCTCGGGATGGAAGAAGATCTGCATTTGCGCTAGTAGAAGGTTAGTAAATT ACATCAAATTCATGTTTTTCTCCTTTTAATGTCATTTCAAGGTGAAGAGTCCAAATGTCAATAA AATGACTTCTGGAGGAAGCATTTATCAGATCAACACAAAATTTACATTTGACCCATAGTTCTTA TTAGTCCTTTTTGTGTTGAAGCCCCTGGACTTTCACTAATACTGAATGCCCTAGAGAACAGAAT TACTCTTCCAACTAATCATACATGTTCAATCATAACATGGGCTTTCAGTTCATTCCAACAATGC ACATGATTTCATGGAGTAGCACATTAGACAAACAAACAGGACACAATCAATTATAACATCAAAA GCTGTAAAAATGTTATCACGTCAGTAGGGTAGCACGCCTGTTCAAAGCATGATTGGTATCATGT CAATTGTAGCAACACTACTAAAAGAACATGGAAACTAGATGATAGAAATGGGAACAAACCTCTG GTCCAAGAAAACGCTCATATCCAATATCAATTGTGTATGGGACTCCAGTCTTGGGCTTAATAGC AGACCAGTGTTTGATATACTTATCAGGCTTTTTGTCATGCTTCTTGAACTCCTGAAATTGTAAC GGAAACACATAATAACCTATCTGTTCAAGATAAGTCTAAACTACAGTTCAATCTTGCTGGTAGA ACCAGAATAATAATATCATATGTAGTATATATTAGCCAGCAGATAAATCCATGACAAAAGTAAC ATCACAAAAAATTTAATCTCTGCCATCCGAATCATGCTGCAACTTGCCCATGGGCTATTCTCCA GGCATTAACTAATCCGTGATAATCATAACAAAACAAATTACAATTCACAACAAAGTTGGCATTT TTTTTGTTTCTTCAAACATAATTGTTTCGCATTTAAAATTCAAAGGATGATACAGCACGCCATT ATCTCCTGCGTATTCTGAAAAAAAAATACAGCACACCATTCCTTTCATGGAATTTGTTGTGTTG ACTCGATAGTCGATATACAGATACTTCAACAGAAACATCACTTTCAACTATTTCATCAAAGAAT GTATTTATGTACACCGTTGGAAAATTACAACAAGGTACCCTAAAAAACATAAGGTATTATTGAG TAAGTAGCTCCGAAACCAAGCAGCATAATACCTTGACAATGTCTGAAGAAGTGTAGCAATACAT TTCTTTCACCCTACGAGCTATATCCAAAGAATCCTCAGGTGCAATAAGTTCACCTCTTTCCTGC ACAACAAAAGATGCCATTAATCACTAAAAACATTATGTGACAGGCCACAACTAATTATAGAGGC AATAAAGATCTGGGAGCAGCATAACTCAAATTACAGATGAAAACTGAGTAGAACATTGAGAATA GTATCAATTGTTCTAATTTAGTACTGTAAAAACTACTCGATGCTCCTTTCAATGTATTTGCACT ATATGAATGCTAGATACACACACACATCCTGTTTATGAACAACATGACTTATGAGGAGAAGATG AAATACCTGTAAAAGCTGCAAAACAAACTGTGTAACGTCACTTCCTGAAAATGGAAAAGACTTG ATGCTACTCCCAATTACGTAGCCGTTTACAACCGGCACCACATGTGGAGCTCCATCCCCAATAT CAACTACTACACCTGTCATATCAGACTGACAAAATATACTGGTCAAACTTAACAATAATAAGTA GCATGGTGTACCAGAAATTTTAAGGGCATGTAATTAAAAGGGAGCATGAATAGACCCAACAGAT ATGAATTATGGGTGTTCAAACTTTTGCAAGGTTGGTACTGGCTTGCTAGGAACTACAGATCTTT ATCCTCAACCAAACTGGCAACTAAAAGACTAAATTTACACAGTCATATTGTATTAATGTTGATT TCTCATAGTGCTTCAATCAGTATTATCTGTCTTTCATATTGCTTAAATATATACTTCTCTTCGC ATATAACACAATATGCAGAACATGTTTATTTGCATACCAGTATACAAGGGAATAGCAAAACAAA ACTGCATACAAGAATAGGAATTCTAGGAACAACACAGGCAACAAATATCTATGGATAATATGGC AGGAACAGACTGGATTTTTTTTTTTGAAATGTGGCTATTTAAATATCTTAAAGAAAGGGAGCAA AAACAGAGTTTGTCATAGCAGGGCTACATGTCATTAAAACAAGTTTACAATAATTTTGTAATAC AGAAAATTCTTTTCAGTCAAGGAGATGCAGTCCATGTGGAAACAAATGTCTCACTGGAGCAAAT AAAAAGCATGAAAAGCAGATGTTTACAGAACCTACCACAGAAACCGAGTCCTCATCAGAAATAC TTTTCAGAAAGGCATATCCAGCAGAAAGACTGAGGACAGATTGAACAGAAATATATAGTCCAGG AACATTGAAAGTCTCAAACATAATTTCCCCTGCACATTCACGACTTTCAGGTGTACTGACAGGA CTATCGGTAAGAAGGAAGTAGTGCTCTTCAGGATTGCACCGTAGATAGTTGAAAATGCACTGTT GCCAAAATCTTTCCATTGTATCCCAGTCATCAACCTGCAAAAGGGTAAAAGGGACATACTATAG TCGTATAACATAGAAATATAAACAATTGTTGTTATTACAAACAGAAAACACATAAACATACCTG ACCATGATTAATTGGGTGTTTTCTAGTGTACAGCCCACTAGATTTAAATAGTGATAGAGCCTCA TCACCAATAAAAAAATCCAGGTCAGCCATGACACCTGCATTGTACTGTGCTATCCAATTTGCAC TACTGCACATCTCTGACTGGTCCAGAAAAGACTCATTCACAGCTACTACAGTAGGGATGGTGAA ACATGGCTCAGAGTTACCAGAGAATCCAAGTTTGCTATAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.221377717

Conservation Information
Conserved circRNAs	NA
PMCS	0.221377717

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							1613607-1610344(+)
1612044-1613743(-)
1610321-1612499(-)
						
						Potential amino acid sequence
						
							MTPALYCAIQFALLHISDWSRKDSFTATTVGMVKHGSELPENPSLLYLIKFRVRSSY*(+)
MYCYTSSDIVKEFKKHDKKPDKYIKHWSAIKPKTGVPYTIDIGYERFLGPEIFFHPEIYSADFS
TPLPELIDSCVQSAPIDTRRDLYKNIVLSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVE
VKPVEVNVVAHPIQSYAAWFGGSVAASNPEFYEV*(-)
MRYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLDFFIGDEALSLF
KSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTDSPVSTPESRECAGEIM
FETFNVPGLYISVQSVLSLSAGYAFLKSISDEDSVSVV*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	1613607-1610344(+) 1612044-1613743(-) 1610321-1612499(-)
Potential amino acid sequence	MTPALYCAIQFALLHISDWSRKDSFTATTVGMVKHGSELPENPSLLYLIKFRVRSSY(+) MYCYTSSDIVKEFKKHDKKPDKYIKHWSAIKPKTGVPYTIDIGYERFLGPEIFFHPEIYSADFS TPLPELIDSCVQSAPIDTRRDLYKNIVLSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVE VKPVEVNVVAHPIQSYAAWFGGSVAASNPEFYEV(-) MRYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLDFFIGDEALSLF KSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTDSPVSTPESRECAGEIM FETFNVPGLYISVQSVLSLSAGYAFLKSISDEDSVSVV*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os08g0128300_circ_g.1

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