Plant Circular RNA Database

Detail information of Zm00001d041880_circ_g.11

			
						 General Information
					
						CircRNA Name
						Zm00001d041880_circ_g.11
					
						ID in PlantcircBase
						zma_circ_007656
					
						Alias
						Zm03circ00048
					
						Organism
						
							Zea mays						
					
						Position
						
							chr3: 142184360-142189094  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d041880						
					
						Parent gene annotation
						
							Beta-galactosidase 9
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d041880_circ_g.6 Zm00001d041880_circ_g.7 Zm00001d041880_circ_g.8 Zm00001d041880_circ_g.9 Zm00001d041880_circ_g.10 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d041880_T001:3
Zm00001d041880_T004:3
Zm00001d041880_T002:3
Zm00001d041880_T011:2
Zm00001d041880_T005:3
Zm00001d041880_T006:3
Zm00001d041880_T010:3
Zm00001d041880_T012:2
Zm00001d041880_T009:3

General Information
CircRNA Name	Zm00001d041880_circ_g.11
ID in PlantcircBase	zma_circ_007656
Alias	Zm03circ00048
Organism	Zea mays
Position	chr3: 142184360-142189094 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d041880
Parent gene annotation	Beta-galactosidase 9
Parent gene strand	+
Alternative splicing	Zm00001d041880_circ_g.6 Zm00001d041880_circ_g.7 Zm00001d041880_circ_g.8 Zm00001d041880_circ_g.9 Zm00001d041880_circ_g.10
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d041880_T001:3 Zm00001d041880_T004:3 Zm00001d041880_T002:3 Zm00001d041880_T011:2 Zm00001d041880_T005:3 Zm00001d041880_T006:3 Zm00001d041880_T010:3 Zm00001d041880_T012:2 Zm00001d041880_T009:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGGTGAGTTTTCAAGGATCTATTCTCCTGAGTATCAAGGATCTGCTGAGTGGAGTAGCATGCAG
AATGATGACACAGTTTCACCCTTCACATGGTTCAAGgtagtaaagttggtcattgggtctcact
gaatcaaccgcttcaattagttcaaggacttaatgagttgacattgttatcggagattgttggc
ttgcaggt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GTAGTAAAGTTGGTCATTGGGTCTCACTGAATCAACCGCTTCAATTAGTTCAAGGACTTAATGA
GTTGACATTGTTATCGGAGATTGTTGGCTTGCAGGTATGCCAGATATGAAACAATCTTGTTTAT
GCATTTACACTAGTAAACAACTTTTTAGTTATTATTGTTAGAGTGCATGCACCAACCAATTCAA
CCTAAAAGCTTAACTTCGTAGAAGGTAGACAATTCACTTATACACTTACACTTCAACACCTTCA
CTCACGTGCAGCCAGAGAGGAAGGCGCAAGCGTATAAATAAAGGGACGGAGGCATAAATGAAGC
CTTTGCCGAGATTGAACTCGAGACCTCTGGCTTTGATACCATGTTAGAGTGGGTGCACTAACCA
ATTCAACCCAAAAGCTTAAATGGTGCAGCGATATCCACTGTAATAATTATTCCGAGTAAAATGC
ACTTGAACTTGGCATATTGTGTCACTTGGGTCACCAAACTTAGAAAACCGGCAAAACAGGTCCT
CTAACTTTGTCGGCCAGTGTAAAACCGTCTAAAATTGGGTTTGCTCAAACCGGATACCCTCGTG
GCGTGCCACGTTGGAGCATATTGTAAGAATTGTGAAGTGCTTGATTGTATTGATAGGAGATGGG
GTACAATATATAGACTCACAACCCTAACCCTAATGGGCCGGCAGCCCAACAGTGGTGCCGACCC
ACACACACAGTCTAACATCCCCCCACAGTCGTAACGGGGACACCACACACGATGAGACTGGAGT
AGAGGCTAAAGGTAGGAGCCGACGGGTTGAAATCCCCCCGCAATTGCAGCGTCGTGAGGGTGCG
AATGTTGCGGCCGGAGCAGAGACCGGTGTGTGCGCCAAGGAGACGATAGCCCCTAGATGCCGAG
GTAGCCGAAGTCGAGGTGGTCGTGGTCGGGAGGCACGCAACAGAAGCCTGTTCTTCGGGAGGGG
TCGACGTTCGAGTGTCAACGATCGACGAGGGCGACACAACAAAAGGGCACTAGCAGGTCGACCT
TCTTGCTTCTTTGATCGTCCGGATGTTGAGGAGCCCCGCCAGGGAGGCAGACGGCAGCGCACGC
GTCTGCACCGGTCATGGGGTCCACGTCCGCAACAGAATAGTAGGGGTAACGGCGGATCCAACCG
GGAAGGCCACGACAGCGAAGGATCCGGCCGGGAAGACGCGAACCGGCCAAAGGGACAGCAGATC
GAGCCGAGAAGGTCGCAACAACGGTGAATCCGGTCGGGAAGGCCGCGACAGCGACGGATCCAAC
GAAGGCGACGAAGGGGAGGGCGATGGGACGGTTCCAGCCGGGCAAGTGCCTGCGCCGGTCCTGT
CAGGTGGTTTTGATGACGGTGATGAAAGAAGCTCGATAAGTTAGCGCTGCTGGGTGTCAGCGTT
GGCAGTTAGGTGGCCAGCGCGATGAGGGCGGCGGCGCGCAGGAAGACCGAGGTGGGCGCTGTGC
GTGGGGGTGTGCACGCCGAGGAGGGGTGCGGACGCCGGGGAGGGCGCGACGCGTGGAGGCGGCG
GCGCGCAGGAAGGCCGGGGAGGAGATGAGCTCGGTGGAGGATGCAGTCGAGCCCGGCTGCCACC
GCCGCTGGCCGGGGACATGCGCGCACGCCGAGGCCGGGTCATGCCTGAAGGAGGCGGCCGTGCC
TGGCCGGAGACGCACGCTGCGCCCTCATCGGGGCTGCGCGCCGTCGGGGTCGGGTAGTCGCGCC
TGCGCCGTGGCCAGGTCGTCGCACCATGCGCCGGGTCGGGATGGCCACGCCCGCTGTGCCGCCG
GGGGGTCCACACGCCGGGACGCCGCCGACTCCTGGGGCTGCACCCGCCGCCGGTGCCGCCGACT
GTTGAGGGAAGGGTGGACGGGCATGGGGGAGCCACCGCCCCGGGAAGCGCCTTGGCCAGGCCGC
CGCGCCGGGTCGGGATGGCCACGCCCACGCCGTTGTGCCGCTGGGGGCTCCGCACGCCGGGACG
TCGCGCCGCCTAGGGGCCGCGCCCGCACCACCGAGGCCTGGGGCCGCACCCGCCGCCGGGGCCA
CCGACTGTTGAGGGAAGGGGGGACGGGCATGGGGGAGCATTGGTATCATAATCTACATGTAGCG
GGTATAGTTTAGTGGTAAAAGTGAATTGAAACTCGAAGTGAGAGCATGCATTTCCAGCCATACG
GAGAGAATTACCCGCCTACCTAGATGGTCTGCCTACTAGTTCTTTTGAGAAGAAGTGCATGCAC
TTCTTAATTCCAACCCATTTCATGGATTTTCTCTAGCTACCTCATTTCAGTAAAGTTAAGTGGG
TCGCCCACTCGATCCTTAGCAATAAGCCTACAGCTAAGAAGATGGAATGGTACCAAGCTCACTT
ATACGCACTCCTAAATGAAACAAACTAGACTATCACACTAAGTTACACCTGCCCTGAGCCATAA
ATCAATAGAAGAGTTCGGTATTATTTCCATCTTTTCCATTAGTTTCTATGAAATCCTGATATTC
GTTTTTCTATTCCACTGCGCATAGCCGGAGGGAAAGATGAGCCTCCCGGGGCGGCGACGTGGAA
GCCTGTGGCTGCTGGCCTAGTAGCAGAGGTGGCCGACGGCTAGGGTGGGAGGAAGGAAAAACCT
AATATTCTAATACCATGTAAAATAATGTAAAGTGGTTGATGTATTGATAGGAGATGAGGTACAA
TATATAGACTCACAACCCTAACCCTAATGGGCCGACAACCCAACAGTGGTGCCCCCCACACACA
CAGTCTAACACATACTAATGAAAGATCGGGTACCCAAGTGGCACAACATGTCAAGTTCGGGGAC
CCAAGTGAGCAGGATTGGGAAGAGAAGGCTTGGTGCGGTGAAGAAAGCTGTTTCACTGAGGCAT
TAGTTTATAGGTTTGAAACAGCCTCTCTACATTTGTGGAGAGAGACTTATCTTGGTTTATCCCT
TCTCCGGACTCATGTGGGAGCCTCTAACCTGGGTCTCCCCATTCCTATCTCTTCTCCAGACCCC
ACTCATTGTTGGAGCCTCTATCACTGGGTCTACCCACTCCTATTGGATACATATTGGGGTTGTA
TCCCTCACATATCCTTATTGGATATGTATCTAATATGGGAGGTAGGGATACTTAATGTTGGAAT
ATAATATAAGTGAATTGTCCACCTCTTTCCATCAGATTAAGTTTTTGGGTTGAATTGGTTGATG
CATGCAACTTAATATGGTATCAGAGTCAGAGGTCATGAGTTCGAATTATGATTAGCGCAATTAA
AATAAAATAATTGTTGTTTGCTCCTATTCCACGTCTGAGACCCAATAGAGGCTAGACGTGAGGG
GGAGTGTTGGAATATAATATAAGTGAATTGTCCACCTCTCCCATCAGATTAAGCTTTTGGGTTG
AATTTGTTGGTGCATGCAACTTAATACTTACCATGGCCAAGTGGCACCATGTTCCTTTTTCTCG
GAAACATGGGAGAGCTATGTTTTGTATTTATAGATAGAAGAAAGAAGTCCCCTGAATGGTACCC
CTAGAGGCAAGGTACAAGAAGGAACTTAAACACTAAATGACGGAAAAATAAAAGGAGAAAAAGG
AAAAACAACAGGGTGGCAGAGAGTAGAACTCCAAGTGCCTAGTCCAATATGGCACCAACTCCAA
CAAGCCCTTTTGCTCCCATGGAATCCACACCTGCCTTGCAAACACATGTCATGTGCATGTGGTA
GATTGTTTCTTCAACTTGAAAGATCACCCCTGATTGCACACTGTTTATCTTCTCTTATTAAACC
CAAATATTGTAGTGCTTTTGGTGAACCCTCTATAGTTAATTGCTGTTAGCAACTTGTTTGGTGT
CTTCACTGATAAAAAGTATCTCCAACTATCTCATTTGAATAATGTACGGACATATTAACATATT
TAATATGATGTATGCTTTTCATTTTCTGTCTGCTGTTTCTTTTAGTTATGTTCGTATGCATGAT
CATCAAGCATGAGATGAAAAATGTTTTTCTCATTTCGTAATGATTGAACATTGTGCAAGAACTA
TGGTGCTTTCTTGGAGAAGGATGGTGCTGGATTTAGAGGTCAAGTAAAACTCACTGGCTTGTCG
AATGGGGATATCGACCTTACTAATTCTCTTTGGACATATCAGGTATTGACTAGCTTTAACGTTG
ATGTTTTCTTTTATTATGATAACTTGAAGCTTTGAGTTTCAACTTCTTCTACGTTGTTTGTTGT
GATTTGATGCTATTGTTTTCAGTTCTGTTTATTCATGTATATTCTTACTGTTAGGTAGCTACAA
AGGTTTTACATTAGAAGCATAGGATTGCTTGAATATTGTTCTCATGAGTTACCATGTGGATATG
GATGACAAGAATATTGTACTTATTAGTTACATTGTGGATATAACAAGGCTACAACACTGATTGT
GCATTATCCCTAAACTCATATTGTCTGACTTCTTGAACTTCGTTCTTCGCCAATAAGAGATGTT
TTATGTAGCATCTCTTCATCATGTCATGTTTGCTAGCTTCTTGCGCGCACAGCCACGAGCAGTG
TGCTATGTGGTTGAAACTTGTGATGAGAATTCCAGTGCAGCATTAACTGGACAATATGCTATTA
TCTTTCCAAATTGCAGATTGGTTTGAAAGGTGAGTTTTCAAGGATCTATTCTCCTGAGTATCAA
GGATCTGCTGAGTGGAGTAGCATGCAGAATGATGACACAGTTTCACCCTTCACATGGTTCAAG
						
					

			
		

Sequences
Splice junction sequence	AGGTGAGTTTTCAAGGATCTATTCTCCTGAGTATCAAGGATCTGCTGAGTGGAGTAGCATGCAG AATGATGACACAGTTTCACCCTTCACATGGTTCAAGgtagtaaagttggtcattgggtctcact gaatcaaccgcttcaattagttcaaggacttaatgagttgacattgttatcggagattgttggc ttgcaggt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GTAGTAAAGTTGGTCATTGGGTCTCACTGAATCAACCGCTTCAATTAGTTCAAGGACTTAATGA GTTGACATTGTTATCGGAGATTGTTGGCTTGCAGGTATGCCAGATATGAAACAATCTTGTTTAT GCATTTACACTAGTAAACAACTTTTTAGTTATTATTGTTAGAGTGCATGCACCAACCAATTCAA CCTAAAAGCTTAACTTCGTAGAAGGTAGACAATTCACTTATACACTTACACTTCAACACCTTCA CTCACGTGCAGCCAGAGAGGAAGGCGCAAGCGTATAAATAAAGGGACGGAGGCATAAATGAAGC CTTTGCCGAGATTGAACTCGAGACCTCTGGCTTTGATACCATGTTAGAGTGGGTGCACTAACCA ATTCAACCCAAAAGCTTAAATGGTGCAGCGATATCCACTGTAATAATTATTCCGAGTAAAATGC ACTTGAACTTGGCATATTGTGTCACTTGGGTCACCAAACTTAGAAAACCGGCAAAACAGGTCCT CTAACTTTGTCGGCCAGTGTAAAACCGTCTAAAATTGGGTTTGCTCAAACCGGATACCCTCGTG GCGTGCCACGTTGGAGCATATTGTAAGAATTGTGAAGTGCTTGATTGTATTGATAGGAGATGGG GTACAATATATAGACTCACAACCCTAACCCTAATGGGCCGGCAGCCCAACAGTGGTGCCGACCC ACACACACAGTCTAACATCCCCCCACAGTCGTAACGGGGACACCACACACGATGAGACTGGAGT AGAGGCTAAAGGTAGGAGCCGACGGGTTGAAATCCCCCCGCAATTGCAGCGTCGTGAGGGTGCG AATGTTGCGGCCGGAGCAGAGACCGGTGTGTGCGCCAAGGAGACGATAGCCCCTAGATGCCGAG GTAGCCGAAGTCGAGGTGGTCGTGGTCGGGAGGCACGCAACAGAAGCCTGTTCTTCGGGAGGGG TCGACGTTCGAGTGTCAACGATCGACGAGGGCGACACAACAAAAGGGCACTAGCAGGTCGACCT TCTTGCTTCTTTGATCGTCCGGATGTTGAGGAGCCCCGCCAGGGAGGCAGACGGCAGCGCACGC GTCTGCACCGGTCATGGGGTCCACGTCCGCAACAGAATAGTAGGGGTAACGGCGGATCCAACCG GGAAGGCCACGACAGCGAAGGATCCGGCCGGGAAGACGCGAACCGGCCAAAGGGACAGCAGATC GAGCCGAGAAGGTCGCAACAACGGTGAATCCGGTCGGGAAGGCCGCGACAGCGACGGATCCAAC GAAGGCGACGAAGGGGAGGGCGATGGGACGGTTCCAGCCGGGCAAGTGCCTGCGCCGGTCCTGT CAGGTGGTTTTGATGACGGTGATGAAAGAAGCTCGATAAGTTAGCGCTGCTGGGTGTCAGCGTT GGCAGTTAGGTGGCCAGCGCGATGAGGGCGGCGGCGCGCAGGAAGACCGAGGTGGGCGCTGTGC GTGGGGGTGTGCACGCCGAGGAGGGGTGCGGACGCCGGGGAGGGCGCGACGCGTGGAGGCGGCG GCGCGCAGGAAGGCCGGGGAGGAGATGAGCTCGGTGGAGGATGCAGTCGAGCCCGGCTGCCACC GCCGCTGGCCGGGGACATGCGCGCACGCCGAGGCCGGGTCATGCCTGAAGGAGGCGGCCGTGCC TGGCCGGAGACGCACGCTGCGCCCTCATCGGGGCTGCGCGCCGTCGGGGTCGGGTAGTCGCGCC TGCGCCGTGGCCAGGTCGTCGCACCATGCGCCGGGTCGGGATGGCCACGCCCGCTGTGCCGCCG GGGGGTCCACACGCCGGGACGCCGCCGACTCCTGGGGCTGCACCCGCCGCCGGTGCCGCCGACT GTTGAGGGAAGGGTGGACGGGCATGGGGGAGCCACCGCCCCGGGAAGCGCCTTGGCCAGGCCGC CGCGCCGGGTCGGGATGGCCACGCCCACGCCGTTGTGCCGCTGGGGGCTCCGCACGCCGGGACG TCGCGCCGCCTAGGGGCCGCGCCCGCACCACCGAGGCCTGGGGCCGCACCCGCCGCCGGGGCCA CCGACTGTTGAGGGAAGGGGGGACGGGCATGGGGGAGCATTGGTATCATAATCTACATGTAGCG GGTATAGTTTAGTGGTAAAAGTGAATTGAAACTCGAAGTGAGAGCATGCATTTCCAGCCATACG GAGAGAATTACCCGCCTACCTAGATGGTCTGCCTACTAGTTCTTTTGAGAAGAAGTGCATGCAC TTCTTAATTCCAACCCATTTCATGGATTTTCTCTAGCTACCTCATTTCAGTAAAGTTAAGTGGG TCGCCCACTCGATCCTTAGCAATAAGCCTACAGCTAAGAAGATGGAATGGTACCAAGCTCACTT ATACGCACTCCTAAATGAAACAAACTAGACTATCACACTAAGTTACACCTGCCCTGAGCCATAA ATCAATAGAAGAGTTCGGTATTATTTCCATCTTTTCCATTAGTTTCTATGAAATCCTGATATTC GTTTTTCTATTCCACTGCGCATAGCCGGAGGGAAAGATGAGCCTCCCGGGGCGGCGACGTGGAA GCCTGTGGCTGCTGGCCTAGTAGCAGAGGTGGCCGACGGCTAGGGTGGGAGGAAGGAAAAACCT AATATTCTAATACCATGTAAAATAATGTAAAGTGGTTGATGTATTGATAGGAGATGAGGTACAA TATATAGACTCACAACCCTAACCCTAATGGGCCGACAACCCAACAGTGGTGCCCCCCACACACA CAGTCTAACACATACTAATGAAAGATCGGGTACCCAAGTGGCACAACATGTCAAGTTCGGGGAC CCAAGTGAGCAGGATTGGGAAGAGAAGGCTTGGTGCGGTGAAGAAAGCTGTTTCACTGAGGCAT TAGTTTATAGGTTTGAAACAGCCTCTCTACATTTGTGGAGAGAGACTTATCTTGGTTTATCCCT TCTCCGGACTCATGTGGGAGCCTCTAACCTGGGTCTCCCCATTCCTATCTCTTCTCCAGACCCC ACTCATTGTTGGAGCCTCTATCACTGGGTCTACCCACTCCTATTGGATACATATTGGGGTTGTA TCCCTCACATATCCTTATTGGATATGTATCTAATATGGGAGGTAGGGATACTTAATGTTGGAAT ATAATATAAGTGAATTGTCCACCTCTTTCCATCAGATTAAGTTTTTGGGTTGAATTGGTTGATG CATGCAACTTAATATGGTATCAGAGTCAGAGGTCATGAGTTCGAATTATGATTAGCGCAATTAA AATAAAATAATTGTTGTTTGCTCCTATTCCACGTCTGAGACCCAATAGAGGCTAGACGTGAGGG GGAGTGTTGGAATATAATATAAGTGAATTGTCCACCTCTCCCATCAGATTAAGCTTTTGGGTTG AATTTGTTGGTGCATGCAACTTAATACTTACCATGGCCAAGTGGCACCATGTTCCTTTTTCTCG GAAACATGGGAGAGCTATGTTTTGTATTTATAGATAGAAGAAAGAAGTCCCCTGAATGGTACCC CTAGAGGCAAGGTACAAGAAGGAACTTAAACACTAAATGACGGAAAAATAAAAGGAGAAAAAGG AAAAACAACAGGGTGGCAGAGAGTAGAACTCCAAGTGCCTAGTCCAATATGGCACCAACTCCAA CAAGCCCTTTTGCTCCCATGGAATCCACACCTGCCTTGCAAACACATGTCATGTGCATGTGGTA GATTGTTTCTTCAACTTGAAAGATCACCCCTGATTGCACACTGTTTATCTTCTCTTATTAAACC CAAATATTGTAGTGCTTTTGGTGAACCCTCTATAGTTAATTGCTGTTAGCAACTTGTTTGGTGT CTTCACTGATAAAAAGTATCTCCAACTATCTCATTTGAATAATGTACGGACATATTAACATATT TAATATGATGTATGCTTTTCATTTTCTGTCTGCTGTTTCTTTTAGTTATGTTCGTATGCATGAT CATCAAGCATGAGATGAAAAATGTTTTTCTCATTTCGTAATGATTGAACATTGTGCAAGAACTA TGGTGCTTTCTTGGAGAAGGATGGTGCTGGATTTAGAGGTCAAGTAAAACTCACTGGCTTGTCG AATGGGGATATCGACCTTACTAATTCTCTTTGGACATATCAGGTATTGACTAGCTTTAACGTTG ATGTTTTCTTTTATTATGATAACTTGAAGCTTTGAGTTTCAACTTCTTCTACGTTGTTTGTTGT GATTTGATGCTATTGTTTTCAGTTCTGTTTATTCATGTATATTCTTACTGTTAGGTAGCTACAA AGGTTTTACATTAGAAGCATAGGATTGCTTGAATATTGTTCTCATGAGTTACCATGTGGATATG GATGACAAGAATATTGTACTTATTAGTTACATTGTGGATATAACAAGGCTACAACACTGATTGT GCATTATCCCTAAACTCATATTGTCTGACTTCTTGAACTTCGTTCTTCGCCAATAAGAGATGTT TTATGTAGCATCTCTTCATCATGTCATGTTTGCTAGCTTCTTGCGCGCACAGCCACGAGCAGTG TGCTATGTGGTTGAAACTTGTGATGAGAATTCCAGTGCAGCATTAACTGGACAATATGCTATTA TCTTTCCAAATTGCAGATTGGTTTGAAAGGTGAGTTTTCAAGGATCTATTCTCCTGAGTATCAA GGATCTGCTGAGTGGAGTAGCATGCAGAATGATGACACAGTTTCACCCTTCACATGGTTCAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.029624933

Conservation Information
Conserved circRNAs	NA
PMCS	0.029624933

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							142189086-142184386(+)
142189054-142184386(+)
142184378-142189030(-)
						
						Potential amino acid sequence
						
							MVQGSKVGHWVSLNQPLQLVQGLNELTLLSEIVGLQNYGAFLEKDGAGFRGQVKLTGLSNGDID
LTNSLWTYQIGLKGEFSRIYSPEYQGSAEWSSMQNDDTVSPFTWFKVVKLVIGSH*(+)
MQNDDTVSPFTWFKVVKLVIGSH*(+)
MTNFTTLNHVKGETVSSFCMLLHSADP*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	142189086-142184386(+) 142189054-142184386(+) 142184378-142189030(-)
Potential amino acid sequence	MVQGSKVGHWVSLNQPLQLVQGLNELTLLSEIVGLQNYGAFLEKDGAGFRGQVKLTGLSNGDID LTNSLWTYQIGLKGEFSRIYSPEYQGSAEWSSMQNDDTVSPFTWFKVVKLVIGSH(+) MQNDDTVSPFTWFKVVKLVIGSH(+) MTNFTTLNHVKGETVSSFCMLLHSADP*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d041880_circ_g.11

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