Plant Circular RNA Database

Detail information of Os01g0502400_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os01g0502400_circ_g.4
					
						ID in PlantcircBase
						osa_circ_001846
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 17399115-17403973  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os01g0502400						
					
						Parent gene annotation
						
							2OG-Fe(II) oxygenase domain containing protein. (Os01t0502400-01
)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os01g0502400_circ_g.1 Os01g0502400_circ_g.2 Os01g0502400_circ_g.3 Os01g0502400_circ_g.5 						
					
						Support reads
						1
					
						Tissues
						shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0502400-01:6

General Information
CircRNA Name	Os01g0502400_circ_g.4
ID in PlantcircBase	osa_circ_001846
Alias	NA
Organism	Oryza sativa
Position	chr1: 17399115-17403973 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os01g0502400
Parent gene annotation	2OG-Fe(II) oxygenase domain containing protein. (Os01t0502400-01 )
Parent gene strand	+
Alternative splicing	Os01g0502400_circ_g.1 Os01g0502400_circ_g.2 Os01g0502400_circ_g.3 Os01g0502400_circ_g.5
Support reads	1
Tissues	shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0502400-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGAGATGAAGAAATATCAGAAGGACTTTTCGGGCTGGTGTGGTGAATGTAAACGTGAGAAGAAG
GAGAGGCAGATTCATGCTGTTAAAGCAACTAAGCTGccacttcataaagagctatacaaaatgc
gcccttcatcgttctttttaccaacattccttgaagctattaggaccaatacagaagaaagctt
tagaagca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CCACTTCATAAAGAGCTATACAAAATGCGCCCTTCATCGTTCTTTTTACCAACATTCCTTGAAG
CTATTAGGACCAATACAGAAGAAAGCTTTAGAAGCATTATGACTGAGCCAGTTCCTGGTGTTTA
TTCATTTGCTATGTTACAGCCTAATTTTTGTGAGATGCTATTACAGGAGGTATGGTAGCATATA
ACATACAATTTTGATATTGCTATATCATGTTTTGTTACAAACTTACAATGATAAAACAATGTTT
TACACCTTGTAGGTAGAGAACTTCGAAAAATGGGTCCACACAATGAAATTTAAGATAATGAGGC
CAAATACAATGAACAAGTATGGTGCTGTCCTTGATGATTTTGGCCTGGAAGTTATGCTGAACCA
ATTCATGGAACAGTTCATAGCTCCAATGTCTACAGGTTATCTTATCGACTGCTATCCTTGTTAA
ATAGAGGCAGAATCACTAGCATTTTCAAAATATATTTCCTATATTGATTTTATGCTGTGTTAAT
CTTCAGTATTATATCCTGAGGTTGGTGGAGGAACATTAGATACACACCATGCTTTTGTTGTTGA
GTATGGGAAAGACAGGGATGTTGAACTCGGTAAGTTACCATTATAAATTTATAATATTGTTTTA
TACTTAATAGCCTGTAAAATCATATGAAGTAAAAGAATTGTTCTTGATTGATCATGTCTGCATT
CAGCTATTCCATGTAACTATGGATACTATTTGTATTGTTGTTCCTCCCTGTTGAGAAATCAATC
ACATATCAGTTTTTGAGCCAATGGTTTGGCCTTTCCTACTTAAAATGGCAATATGTTGAAACTA
GTTTCAATGACTAGATGATAAATCAATATGACCAACTTTCACTGTCAGGAACTTGTGGAACTGC
TATCAAAGGTAGAGGTCACATCTTCTCTATCTAGTCTGGAGTCTGGAATTTCTCTTCTCTCTCT
GTCTACTATATTTTGGACAGAGGGAGTATCTTATTGTGCACTATGCGCTTAGATATATTTGTAC
TACTATCACCTAGGGGTGTTCATCGACAGGAAAGATTAGCTATCATGATGAAAAATGAATGCTA
TGCTGTCTCTTAATGAAGTAGAACAAAGACCGGGGCTGATAGAATGGCATGATAAAACCGTTTT
CTTTCTCAGTTTTTTTTTTTGAGGAGGGGGGGGGGGCAGTAAGGATTCAAGGGACTAAGAAAGT
TCTTAAGTTCAACTAACTTAGTGCCCGAAATTTCAGTGGATAACTTACATCTTTCCAAACCTTG
CTTTAAACTACCTTACGAACAGCAGTTGAGAACTTGAAATCTGGGCAGCAGATGAGATTTAGTA
ATTCTGCTTTTTGGTGCCTACATGTTGTACCGTTTATTTTACAACTAATTGACATTGTAGTCAT
GTTAGGCCACTGAAATGATCATCAGTTAATTGTTTGGGGTGTTCTCGACTTCTTGTTATAAATG
AGGCCAGAGGCATAATTTGCTTCAGAAAGGAGTGGCTAGTATCATGTTACCAGAAACTTTAAGG
TCCTTGCCTATTAGTCTTAAATTCTTTTCAGAGCCAATCCACCTTCCCAGGTTGTTCCTGCATC
GCACATCGCACACATTACTAGAATTTCTGGATGTTAAGATGGTTTCACGCTTTTATTTACTTCT
TTTATCCAGGTAGTTAAATATGAAACATTAAAAGCATGTCAGAAAACTTCATTCTATTCGCGTG
AAATTTTGATATGGTATATTTGTCACTGTTCTAAAACAATACCTACAAGGCCACACACAAGGAA
TGGGTGCGCAACCTTGTAATGCTTAAGCCGCATTAGAGTTCCATAAAGAAATGTTCTTTTGTAA
TTAACAGAGTTCCATAATTTCATTAATTTTCTTAGTTGCACTTTTTTTTAAGTATATCGATTTG
CCTTAGTTCCTAATGATACTTTTGCCATTTTTCATTCTCAGTTTTTGTTCAAACATTTCTTTTC
TGTTCTAAACCGTTTCTCAACATTATAGGTTTCCACGTTGACGATTCTGAGGTTACATTGAATG
TTTGCCTTGGCAAGCAATTCTCTGGTGGTGAGTTATACTTTCGTGGCATCCGTTGTGAGAATCA
TGTGAATTCAGAGACACAGCATGAGGTAGATGAACTTTTATGTTTTAGTTGCATTTAATATCTA
TTTTTAAATTTCAAACCCACCTCTTTTCTTCTCTTCTGTGAGTGCATTTATGTGGTGTTGAAAC
TTATTTTGTTCAGATTTTTTTTTTGCATGAAACTTGTCATTTACTTGCAACATATTCTGGTTAA
TTTGTTCACGGAAGTTACACAATACATAATTGAAGATATATATTTTTTTACCCTTTTCAATTTC
ATTACTCATGTTGCAGGAAATGTTCGATTACTCTCATGTTCCTGGACGAGCTGTGCTCCATCGT
GGTCGTCATAGGCATGGTGCCCGACCGACATCATCTGGGCTCAGAATCAATCTTCTTTTGTGGT
GCAGAAGGTATACAAGTCTTACAGATCTTCCCATACAATTTTGATTGTCAAAGATTTCAGTGAC
CTTTTGTCTTGCTTGTTTAAAGCACATACTGGGCATGTATTATAGCTACCGTTTATGCGGACAT
TTGAGGTTTAGTTCAGTGAAATATTATGACCATATATATGTATGCATTTTTTTCCTTAACTTAT
CATGTTTTATTGGTGCTTGTTTCACGGAAAGTTGTGTTGGTATTGCGTAGTTCATGTCAAGGGT
AAGAAACCTGAAACTACAAAATACACCTGATCAAAGGCCTCTCATGAGTGCTGTGGAATCAAGG
TAGTTAGTGGAATCTTTACTGATTTAAGATTTTGCTGTTACAGCTTGCAAAAGTTACGGAGTCC
TATTGTTTTGAAGGGATTAGCTATTTCCAACATGGTTGTAGTCTCAACGAAGACATTCCTCATA
GTCAAATGTTGACAATAGTTCCTGGAAATCAATTTGTAGATTGATTACTGATAAGACAGCTCAA
GCGAGTCTAGCCTGAGATATAAAACCACACTAGCCAATAAAAAAGGTAGCCAAACAAAACTAGG
GAGTTTTCATCCAGGCGAACAAGTAGAAAGAGCTTACTTGGTAGTGGGGAGCTCTTTCTGCATT
ATCTGTTTTAGCAGCTCTTATTTCTATTGAGTGCTCAACTAGCTCTTAAACATTAAAAAGGATA
CTTATCCAGAAAGGTCAGTTGCCCCTTACTTTTACTGACAGAACATAACAACCACTGATGATTT
TATTTTATTTTAGTATTTTTCACCAAATAATACTAAAGATAATGTTCTTCACCTAGCATAACTT
CCTCATGAAACTTTTAACTTAATACTCCATCTGGTTGCAAAAACATGTTTCGGACATCTCTCAA
TTCAAACTTTGAAAATTTTAAACATCAATATCATTTTAATTATTTAAAAAGGATGCAGGCAAAC
CATATGTATATATTTTGTTGGGCTTTACAGATGTCTTAGTTGTAGAAGTTGTATTATGAAGATC
ATGTTGGTGTCCAACATGACATTTTTTTTATGGTAGAGGTAATTATTAGATTTGTAGTGTACGT
AACTCTATAATAGATAGTGTAATGTTGATTTCTTTAGATTGTATCACCTGTGCACTATCATATA
ATGATGATGCTAAAAAGGTTCAGATTCGCACGCAAATCTGTTTTGTGGTTAATGATGAAGTGAT
GGAAATTTGGTAAACCATAATAGACATACGAGCATACGACTATATGAGCTGTTGTATTGTATCA
TTAGATCAAAATTCCAACTTATGGTATGCTTTGGTGAAGTATCAATATTTTATTTCTGTTCCTT
TTTGTTTTATTAGAACCGTACTTGTTCTTTAGCAGTGATTTGAATAAAATTGCACACGGATGTT
TTTTATTAGGACTAAGATTAGATAAGACATATGGGGTAGTTTGAATGGAGAAAGGTGGAGCAAT
GTTATGTTGTTTGAATAAGATGCAGCCAGGCGCAATAGTAAAATTTCAGGAACAAAACAAGATG
CAAACATAGGAAAGGTTTAAGAGGTCAACATAAGTTGTTCCATGAAAAACTTCTCTTTAACAAT
GTATCATCTCCCTAGCTATGTATCTGTACGTATGCTACTTTCTGTGCAATTTAGGGAGGGATTT
TAGAAAGATTTTGCTTCCATTGACAAATCCAAAAACTGAACATATATATGGAACTCCATAAGGT
TGAGTTCAAATTTGATTTTTCTGTAAACAAGATAGACATACATTTTCTTCTGATGTATGAGATT
CCACTGTCTGTCCATCATACTGAAAGAGCCTAGTGCTTACCACTCGGATAGCTTAAGGTTAGTA
AATCAACGAAACATTAATGGAACTAGAAGTTTGAGACAACAAAGCATTAGTGCAAAATTACAAA
TATTTTGAGATAATGGTCATGATTACAGATTTAAGATGCTCTATTGCATATCTTAATTTGTAAC
AAGTTTGGTGCTAAATATGTAGATCTGTGATACTTCGTGTTGAATCTGTAGTTATGTCAAAATA
TATGTGGTTTTGCTAAATTTATCTTTATATTTATGTCATTCAAATGCAATCCCAAAGGTTATTC
TTTCTCTTGACATCCGCAAAGAGAACTTGTTACTGGTTACTGGCTACTGGCTACTGGCTACTGA
AAAGATTATCTTTCTTGTGGCTACTGGCTACTAGCAAGCTAACTTGCAGCTAAAATTAATAGTT
CCTGTGCACAGCTCTGTGTTCAGGGAGATGAAGAAATATCAGAAGGACTTTTCGGGCTGGTGTG
GTGAATGTAAACGTGAGAAGAAGGAGAGGCAGATTCATGCTGTTAAAGCAACTAAGCTG
						
					

			
		

Sequences
Splice junction sequence	GGAGATGAAGAAATATCAGAAGGACTTTTCGGGCTGGTGTGGTGAATGTAAACGTGAGAAGAAG GAGAGGCAGATTCATGCTGTTAAAGCAACTAAGCTGccacttcataaagagctatacaaaatgc gcccttcatcgttctttttaccaacattccttgaagctattaggaccaatacagaagaaagctt tagaagca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CCACTTCATAAAGAGCTATACAAAATGCGCCCTTCATCGTTCTTTTTACCAACATTCCTTGAAG CTATTAGGACCAATACAGAAGAAAGCTTTAGAAGCATTATGACTGAGCCAGTTCCTGGTGTTTA TTCATTTGCTATGTTACAGCCTAATTTTTGTGAGATGCTATTACAGGAGGTATGGTAGCATATA ACATACAATTTTGATATTGCTATATCATGTTTTGTTACAAACTTACAATGATAAAACAATGTTT TACACCTTGTAGGTAGAGAACTTCGAAAAATGGGTCCACACAATGAAATTTAAGATAATGAGGC CAAATACAATGAACAAGTATGGTGCTGTCCTTGATGATTTTGGCCTGGAAGTTATGCTGAACCA ATTCATGGAACAGTTCATAGCTCCAATGTCTACAGGTTATCTTATCGACTGCTATCCTTGTTAA ATAGAGGCAGAATCACTAGCATTTTCAAAATATATTTCCTATATTGATTTTATGCTGTGTTAAT CTTCAGTATTATATCCTGAGGTTGGTGGAGGAACATTAGATACACACCATGCTTTTGTTGTTGA GTATGGGAAAGACAGGGATGTTGAACTCGGTAAGTTACCATTATAAATTTATAATATTGTTTTA TACTTAATAGCCTGTAAAATCATATGAAGTAAAAGAATTGTTCTTGATTGATCATGTCTGCATT CAGCTATTCCATGTAACTATGGATACTATTTGTATTGTTGTTCCTCCCTGTTGAGAAATCAATC ACATATCAGTTTTTGAGCCAATGGTTTGGCCTTTCCTACTTAAAATGGCAATATGTTGAAACTA GTTTCAATGACTAGATGATAAATCAATATGACCAACTTTCACTGTCAGGAACTTGTGGAACTGC TATCAAAGGTAGAGGTCACATCTTCTCTATCTAGTCTGGAGTCTGGAATTTCTCTTCTCTCTCT GTCTACTATATTTTGGACAGAGGGAGTATCTTATTGTGCACTATGCGCTTAGATATATTTGTAC TACTATCACCTAGGGGTGTTCATCGACAGGAAAGATTAGCTATCATGATGAAAAATGAATGCTA TGCTGTCTCTTAATGAAGTAGAACAAAGACCGGGGCTGATAGAATGGCATGATAAAACCGTTTT CTTTCTCAGTTTTTTTTTTTGAGGAGGGGGGGGGGGCAGTAAGGATTCAAGGGACTAAGAAAGT TCTTAAGTTCAACTAACTTAGTGCCCGAAATTTCAGTGGATAACTTACATCTTTCCAAACCTTG CTTTAAACTACCTTACGAACAGCAGTTGAGAACTTGAAATCTGGGCAGCAGATGAGATTTAGTA ATTCTGCTTTTTGGTGCCTACATGTTGTACCGTTTATTTTACAACTAATTGACATTGTAGTCAT GTTAGGCCACTGAAATGATCATCAGTTAATTGTTTGGGGTGTTCTCGACTTCTTGTTATAAATG AGGCCAGAGGCATAATTTGCTTCAGAAAGGAGTGGCTAGTATCATGTTACCAGAAACTTTAAGG TCCTTGCCTATTAGTCTTAAATTCTTTTCAGAGCCAATCCACCTTCCCAGGTTGTTCCTGCATC GCACATCGCACACATTACTAGAATTTCTGGATGTTAAGATGGTTTCACGCTTTTATTTACTTCT TTTATCCAGGTAGTTAAATATGAAACATTAAAAGCATGTCAGAAAACTTCATTCTATTCGCGTG AAATTTTGATATGGTATATTTGTCACTGTTCTAAAACAATACCTACAAGGCCACACACAAGGAA TGGGTGCGCAACCTTGTAATGCTTAAGCCGCATTAGAGTTCCATAAAGAAATGTTCTTTTGTAA TTAACAGAGTTCCATAATTTCATTAATTTTCTTAGTTGCACTTTTTTTTAAGTATATCGATTTG CCTTAGTTCCTAATGATACTTTTGCCATTTTTCATTCTCAGTTTTTGTTCAAACATTTCTTTTC TGTTCTAAACCGTTTCTCAACATTATAGGTTTCCACGTTGACGATTCTGAGGTTACATTGAATG TTTGCCTTGGCAAGCAATTCTCTGGTGGTGAGTTATACTTTCGTGGCATCCGTTGTGAGAATCA TGTGAATTCAGAGACACAGCATGAGGTAGATGAACTTTTATGTTTTAGTTGCATTTAATATCTA TTTTTAAATTTCAAACCCACCTCTTTTCTTCTCTTCTGTGAGTGCATTTATGTGGTGTTGAAAC TTATTTTGTTCAGATTTTTTTTTTGCATGAAACTTGTCATTTACTTGCAACATATTCTGGTTAA TTTGTTCACGGAAGTTACACAATACATAATTGAAGATATATATTTTTTTACCCTTTTCAATTTC ATTACTCATGTTGCAGGAAATGTTCGATTACTCTCATGTTCCTGGACGAGCTGTGCTCCATCGT GGTCGTCATAGGCATGGTGCCCGACCGACATCATCTGGGCTCAGAATCAATCTTCTTTTGTGGT GCAGAAGGTATACAAGTCTTACAGATCTTCCCATACAATTTTGATTGTCAAAGATTTCAGTGAC CTTTTGTCTTGCTTGTTTAAAGCACATACTGGGCATGTATTATAGCTACCGTTTATGCGGACAT TTGAGGTTTAGTTCAGTGAAATATTATGACCATATATATGTATGCATTTTTTTCCTTAACTTAT CATGTTTTATTGGTGCTTGTTTCACGGAAAGTTGTGTTGGTATTGCGTAGTTCATGTCAAGGGT AAGAAACCTGAAACTACAAAATACACCTGATCAAAGGCCTCTCATGAGTGCTGTGGAATCAAGG TAGTTAGTGGAATCTTTACTGATTTAAGATTTTGCTGTTACAGCTTGCAAAAGTTACGGAGTCC TATTGTTTTGAAGGGATTAGCTATTTCCAACATGGTTGTAGTCTCAACGAAGACATTCCTCATA GTCAAATGTTGACAATAGTTCCTGGAAATCAATTTGTAGATTGATTACTGATAAGACAGCTCAA GCGAGTCTAGCCTGAGATATAAAACCACACTAGCCAATAAAAAAGGTAGCCAAACAAAACTAGG GAGTTTTCATCCAGGCGAACAAGTAGAAAGAGCTTACTTGGTAGTGGGGAGCTCTTTCTGCATT ATCTGTTTTAGCAGCTCTTATTTCTATTGAGTGCTCAACTAGCTCTTAAACATTAAAAAGGATA CTTATCCAGAAAGGTCAGTTGCCCCTTACTTTTACTGACAGAACATAACAACCACTGATGATTT TATTTTATTTTAGTATTTTTCACCAAATAATACTAAAGATAATGTTCTTCACCTAGCATAACTT CCTCATGAAACTTTTAACTTAATACTCCATCTGGTTGCAAAAACATGTTTCGGACATCTCTCAA TTCAAACTTTGAAAATTTTAAACATCAATATCATTTTAATTATTTAAAAAGGATGCAGGCAAAC CATATGTATATATTTTGTTGGGCTTTACAGATGTCTTAGTTGTAGAAGTTGTATTATGAAGATC ATGTTGGTGTCCAACATGACATTTTTTTTATGGTAGAGGTAATTATTAGATTTGTAGTGTACGT AACTCTATAATAGATAGTGTAATGTTGATTTCTTTAGATTGTATCACCTGTGCACTATCATATA ATGATGATGCTAAAAAGGTTCAGATTCGCACGCAAATCTGTTTTGTGGTTAATGATGAAGTGAT GGAAATTTGGTAAACCATAATAGACATACGAGCATACGACTATATGAGCTGTTGTATTGTATCA TTAGATCAAAATTCCAACTTATGGTATGCTTTGGTGAAGTATCAATATTTTATTTCTGTTCCTT TTTGTTTTATTAGAACCGTACTTGTTCTTTAGCAGTGATTTGAATAAAATTGCACACGGATGTT TTTTATTAGGACTAAGATTAGATAAGACATATGGGGTAGTTTGAATGGAGAAAGGTGGAGCAAT GTTATGTTGTTTGAATAAGATGCAGCCAGGCGCAATAGTAAAATTTCAGGAACAAAACAAGATG CAAACATAGGAAAGGTTTAAGAGGTCAACATAAGTTGTTCCATGAAAAACTTCTCTTTAACAAT GTATCATCTCCCTAGCTATGTATCTGTACGTATGCTACTTTCTGTGCAATTTAGGGAGGGATTT TAGAAAGATTTTGCTTCCATTGACAAATCCAAAAACTGAACATATATATGGAACTCCATAAGGT TGAGTTCAAATTTGATTTTTCTGTAAACAAGATAGACATACATTTTCTTCTGATGTATGAGATT CCACTGTCTGTCCATCATACTGAAAGAGCCTAGTGCTTACCACTCGGATAGCTTAAGGTTAGTA AATCAACGAAACATTAATGGAACTAGAAGTTTGAGACAACAAAGCATTAGTGCAAAATTACAAA TATTTTGAGATAATGGTCATGATTACAGATTTAAGATGCTCTATTGCATATCTTAATTTGTAAC AAGTTTGGTGCTAAATATGTAGATCTGTGATACTTCGTGTTGAATCTGTAGTTATGTCAAAATA TATGTGGTTTTGCTAAATTTATCTTTATATTTATGTCATTCAAATGCAATCCCAAAGGTTATTC TTTCTCTTGACATCCGCAAAGAGAACTTGTTACTGGTTACTGGCTACTGGCTACTGGCTACTGA AAAGATTATCTTTCTTGTGGCTACTGGCTACTAGCAAGCTAACTTGCAGCTAAAATTAATAGTT CCTGTGCACAGCTCTGTGTTCAGGGAGATGAAGAAATATCAGAAGGACTTTTCGGGCTGGTGTG GTGAATGTAAACGTGAGAAGAAGGAGAGGCAGATTCATGCTGTTAAAGCAACTAAGCTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.115921994

Conservation Information
Conserved circRNAs	NA
PMCS	0.115921994

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							17399140-17403970(+)
17403952-17399217(+)
17399125-17401579(-)
17399171-17403968(-)
						
						Potential amino acid sequence
						
							MRPSSFFLPTFLEAIRTNTEESFRSIMTEPVPGVYSFAMLQPNFCEMLLQEVENFEKWVHTMKF
KIMRPNTMNKYGAVLDDFGLEVMLNQFMEQFIAPMSTVLYPEVGGGTLDTHHAFVVEYGKDRDV
ELGFHVDDSEVTLNVCLGKQFSGGELYFRGIRCENHVNSETQHEEMFDYSHVPGRAVLHRGRHR
HGARPTSSGLRINLLLWCRSSVFREMKKYQKDFSGWCGECKREKKERQIHAVKATKLPLHKELY
KMRPSSFFLPTFLEAIRTNTEESFRSIMTEPVPGVYSFAMLQPNFCEMLLQEVENFEKWVHTMK
FKIMRPNTMNKYGAVLDDFGLEVMLNQFMEQFIAPMSTVLYPEVGGGTLDTHHAFVVEYGKDRD
VELGFHVDDSEVTLNVCLGKQFSGGELYFRGIRCENHVNSETQHEEMFDYSHVPGRAVLHRGRH
RHGARPTSSGLRINLLLWCRSSVFREMKKYQKDFSGWCGECKREKKERQIHAVKATKLPLHKEL
YKMRPSSFFLPTFLEAIRTNTEESFRSIMTEPVPGVYSFAMLQPNFCEMLLQEVENFEKWVHTM
KFKIMRPNTMNKYGAVLDDFGLEVMLNQFMEQFIAPMSTVLYPEVGGGTLDTHHAFVVEYGKDR
DVELGFHVDDSEVTLNVCLGKQFSGGELYFRGIRCENHVNSETQHEEMFDYSHVPGRAVLHRGR
HRHGARPTSSGLRINLLLWCRSSVFREMKKYQKDFSGWCGECKREKKERQIHAVKATKLPLHKE
LYKMRPSSFFLPTFLEAIRTNTEESFRSIMTEPVPGVYSFAMLQPNFCEMLLQEVENFEKWVHT
MKFKIMRPNTMNKYGAVLDDFGLEVMLNQFMEQFIAPMSTVLYPEVGGGTLDTHHAFVVEYGKD
RDVELGFHVDDSEVTLNVCLGKQFSGGELYFRGIRCENHVNSETQHEEMFDYSHVPGRAVLHRG
RHRHGARPTSSGLRINLLLWCRSSVFREMKKYQKDFSGWCGECKREKKERQIHAVKATKL(+)
MLLKQLSCHFIKSYTKCALHRSFYQHSLKLLGPIQKKALEAL*(+)
MKWQLSCFNSMNLPLLLLTFTFTTPARKVLLIFLHLPEHRASAPQKKIDSEPR*(-)
MLVKRTMKGAFCIALYEVAA*(-)
						
						Sponge-miRNAs
						
							osa-miR5083 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	17399140-17403970(+) 17403952-17399217(+) 17399125-17401579(-) 17399171-17403968(-)
Potential amino acid sequence	MRPSSFFLPTFLEAIRTNTEESFRSIMTEPVPGVYSFAMLQPNFCEMLLQEVENFEKWVHTMKF KIMRPNTMNKYGAVLDDFGLEVMLNQFMEQFIAPMSTVLYPEVGGGTLDTHHAFVVEYGKDRDV ELGFHVDDSEVTLNVCLGKQFSGGELYFRGIRCENHVNSETQHEEMFDYSHVPGRAVLHRGRHR HGARPTSSGLRINLLLWCRSSVFREMKKYQKDFSGWCGECKREKKERQIHAVKATKLPLHKELY KMRPSSFFLPTFLEAIRTNTEESFRSIMTEPVPGVYSFAMLQPNFCEMLLQEVENFEKWVHTMK FKIMRPNTMNKYGAVLDDFGLEVMLNQFMEQFIAPMSTVLYPEVGGGTLDTHHAFVVEYGKDRD VELGFHVDDSEVTLNVCLGKQFSGGELYFRGIRCENHVNSETQHEEMFDYSHVPGRAVLHRGRH RHGARPTSSGLRINLLLWCRSSVFREMKKYQKDFSGWCGECKREKKERQIHAVKATKLPLHKEL YKMRPSSFFLPTFLEAIRTNTEESFRSIMTEPVPGVYSFAMLQPNFCEMLLQEVENFEKWVHTM KFKIMRPNTMNKYGAVLDDFGLEVMLNQFMEQFIAPMSTVLYPEVGGGTLDTHHAFVVEYGKDR DVELGFHVDDSEVTLNVCLGKQFSGGELYFRGIRCENHVNSETQHEEMFDYSHVPGRAVLHRGR HRHGARPTSSGLRINLLLWCRSSVFREMKKYQKDFSGWCGECKREKKERQIHAVKATKLPLHKE LYKMRPSSFFLPTFLEAIRTNTEESFRSIMTEPVPGVYSFAMLQPNFCEMLLQEVENFEKWVHT MKFKIMRPNTMNKYGAVLDDFGLEVMLNQFMEQFIAPMSTVLYPEVGGGTLDTHHAFVVEYGKD RDVELGFHVDDSEVTLNVCLGKQFSGGELYFRGIRCENHVNSETQHEEMFDYSHVPGRAVLHRG RHRHGARPTSSGLRINLLLWCRSSVFREMKKYQKDFSGWCGECKREKKERQIHAVKATKL(+) MLLKQLSCHFIKSYTKCALHRSFYQHSLKLLGPIQKKALEAL(+) MKWQLSCFNSMNLPLLLLTFTFTTPARKVLLIFLHLPEHRASAPQKKIDSEPR(-) MLVKRTMKGAFCIALYEVAA*(-)
Sponge-miRNAs	osa-miR5083
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os01g0502400_circ_g.4

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