Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d009870_circ_g.1 |
ID in PlantcircBase | zma_circ_005659 |
Alias | seedling_test_circ_001481 |
Organism | Zea mays |
Position | chr8: 86257137-86259328 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d009870 |
Parent gene annotation |
Elongation factor 1-alpha |
Parent gene strand | + |
Alternative splicing | Zm00001d009870_circ_g.2 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-No |
Splicing signals | CT-CA |
Number of exons covered | Zm00001d009870_T010:3 Zm00001d009870_T012:2 Zm00001d009870_T003:2 Zm00001d009870_T008:2 Zm00001d009870_T013:1 Zm00001d009870_T011:3 Zm00001d009870_T002:4 Zm00001d009870_T001:3 Zm00001d009870_T006:1 Zm00001d009870_T007:2 Zm00001d009870_T004:3 Zm00001d009870_T009:3 Zm00001d009870_T005:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.033797134 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |