Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Gh_A08G1513_circ_g.3 |
| ID in PlantcircBase | ghi_circ_000927 |
| Alias | ghr_circ_0000659 |
| Organism | Gossypium hirsutum |
| Position | chrA08: 92099641-92104128 JBrowse» |
| Reference genome | v1.1 |
| Type | ei-circRNA |
| Identification method | find_circ; CIRI |
| Parent gene | Gh_A08G1513 |
| Parent gene annotation |
SIMILAR TO: AT4G16770, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| Parent gene strand | + |
| Alternative splicing | Gh_A08G1513_circ_g.1 Gh_A08G1513_circ_g.2 Gh_A08G1513_circ_g.4 Gh_A08G1513_circ_g.5 |
| Support reads | NA |
| Tissues | fiber/ stem |
| Exon boundary | No-Yes |
| Splicing signals | GT-CA |
| Number of exons covered | Gh_A08G1513:1 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS |
| Functional Information | |
|---|---|
| Coding potential | NA |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Salih et al., 2020 |