Detail information of BGIOSGA032693_circ_g.1


General Information
CircRNA Name BGIOSGA032693_circ_g.1
ID in PlantcircBase osi_circ_008861
Alias Chr10:10882134_10882358(ZS97RS2)
Organism Oryza sativa ssp. indica
Position chr10: 7383113-7383337  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA032693
Parent gene annotation NA
Parent gene strand +
Alternative splicing NA
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   GT-CA
Number of exons covered BGIOSGA032693-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GGTGCCACCGAATGTTAGGCCGACAGCTTTATTTCCCCGAGAGAAGAAAGAGAGCAAGAAATTT
GATCAAGACCAGGCAATCCCAAGGGTGCCACCAGATggtcaaaatatggtagggaaggttcttg
attctgtcccaagcataagaaaggctccgagcttcgccaagcctttaccagaaaagaaggggag
catgaaat
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GGTCAAAATATGGTAGGGAAGGTTCTTGATTCTGTCCCAAGCATAAGAAAGGCTCCGAGCTTCG
CCAAGCCTTTACCAGAAAAGAAGGGGAGCATGAAATTTGAGCAAGAGCAGGCAATCCCAACGGT
GCCACCGAATGTTAGGCCGACAGCTTTATTTCCCCGAGAGAAGAAAGAGAGCAAGAAATTTGAT
CAAGACCAGGCAATCCCAAGGGTGCCACCAGAT
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021