Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os01g0835600_circ_g.5 |
ID in PlantcircBase | osa_circ_004752 |
Alias | Os_ciR6252 |
Organism | Oryza sativa |
Position | chr1: 35817939-35818094 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Os01g0835600 |
Parent gene annotation |
AT hook, DNA-binding, conserved site domain containing protein. (Os01t0835600-01);AT hook, DNA-binding, conserved site domain co ntaining protein. (Os01t0835600-02);AT hook, DNA-binding, conser ved site domain containing protein. (Os01t0835600-03);AT hook, D NA-binding, conserved site domain containing protein. (Os01t0835 600-05) |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 2 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Os01t0835600-02:1 Os01t0835600-01:1 Os01t0835600-05:1 Os01t0835600-03:1 |
Conservation Information | |
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Conserved circRNAs | osi_circ_002517* |
PMCS | 0.136752137 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |