Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d029264_circ_g.1 |
ID in PlantcircBase | zma_circ_000647 |
Alias | circ158 |
Organism | Zea mays |
Position | chr1: 64215630-64215938 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d029264 |
Parent gene annotation |
CDPK-related kinase 1 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-TA |
Number of exons covered | Zm00001d029264_T015:2 Zm00001d029264_T010:2 Zm00001d029264_T008:2 Zm00001d029264_T016:2 Zm00001d029264_T021:2 Zm00001d029264_T001:2 Zm00001d029264_T017:2 Zm00001d029264_T005:2 Zm00001d029264_T003:2 Zm00001d029264_T011:2 Zm00001d029264_T014:2 Zm00001d029264_T019:2 Zm00001d029264_T013:2 Zm00001d029264_T002:2 Zm00001d029264_T024:2 Zm00001d029264_T004:2 Zm00001d029264_T007:2 Zm00001d029264_T006:2 Zm00001d029264_T009:2 Zm00001d029264_T020:2 Zm00001d029264_T012:2 Zm00001d029264_T022:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.178558145 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |